| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74, complete genome. |
|---|---|
| Accession | CP002487 |
| Length | 4,878,013 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 960464..960477 | attL TTTCCGCCAGCTCA | N/A | Click |
| 2 | 972397..974055 | PHAGE_Entero_P2: Old; STM474_0926; phage(gi9630369) | 8e-06 | Click |
| 3 | complement(974052..975020) | VirK-like protein; STM474_0927 | N/A | Click |
| 4 | 975148..976266 | PHAGE_Cronob_ENT47670: putative tail protein; STM474_0928; phage(gi431810494) | 4e-05 | Click |
| 5 | 976263..978209 | PHAGE_Plankt_PaV_LD: ABC transporter; STM474_0929; phage(gi371496158) | 5e-41 | Click |
| 6 | complement(978339..978560) | PHAGE_Lactoc_bIL312: Csp; STM474_0930; phage(gi13095918) | 5e-14 | Click |
| 7 | 978884..979204 | PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; STM474_0931; phage(gi414087232) | 3e-05 | Click |
| 8 | 979235..981511 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; STM474_0932; phage(gi15800640) | 0.0 | Click |
| 9 | 981703..982161 | PHAGE_Hypert_2: IS element Dka2 orfA; STM474_0933; phage(gi300116744) | 4e-16 | Click |
| 10 | complement(982624..983307) | PROPHAGE_Escher_CFT073: transposase insF; STM474_0934; phage(gi26249410) | 1e-31 | Click |
| 11 | 990619..990632 | attR TTTCCGCCAGCTCA | N/A | Click |
Region 2, total : 54 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1056421..1056660) | PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; STM474_0993; phage(gi169257270) | 7e-40 | Click |
| 2 | complement(1056703..1057860) | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM474_0994; phage(gi169257271) | 0.0 | Click |
| 3 | complement(1057823..1060708) | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; STM474_0995; phage(gi169257272) | 0.0 | Click |
| 4 | complement(1060835..1061134) | PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; STM474_0996; phage(gi169257273) | 3e-40 | Click |
| 5 | 1061436..1061582 | hypothetical protein; STM474_0999 | N/A | Click |
| 6 | complement(1061617..1062027) | PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STM474_1000; phage(gi169257276) | 6e-74 | Click |
| 7 | 1061983..1062096 | hypothetical protein; STM474_1001 | N/A | Click |
| 8 | 1062352..1062726 | PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; STM474_1002; phage(gi169257278) | 1e-54 | Click |
| 9 | 1062811..1063794 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; STM474_1003; phage(gi169257279) | 0.0 | Click |
| 10 | 1063797..1064546 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; STM474_1004; phage(gi169257280) | 1e-141 | Click |
| 11 | 1064557..1064904 | PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; STM474_1005; phage(gi169257281) | 5e-60 | Click |
| 12 | 1064901..1065212 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM474_1006; phage(gi169257282) | 7e-53 | Click |
| 13 | 1065287..1065580 | PHAGE_Gifsy_2: hypothetical protein STM1019.1n.Gifsy2; STM474_1007; phage(gi169257283) | 8e-47 | Click |
| 14 | 1065872..1066105 | PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; STM474_1008; phage(gi169257284) | 8e-39 | Click |
| 15 | 1066521..1067123 | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; STM474_1009; phage(gi169257286) | 3e-111 | Click |
| 16 | 1067120..1067329 | PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; STM474_1010; phage(gi169257287) | 1e-35 | Click |
| 17 | 1067326..1067943 | PHAGE_Gifsy_2: NinG; STM474_1011; phage(gi169257288) | 1e-116 | Click |
| 18 | 1067940..1068086 | PHAGE_Gifsy_2: hypothetical protein STM1022.1n.Gifsy2; STM474_1012; phage(gi169257289) | 5e-22 | Click |
| 19 | 1068076..1068873 | PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; STM474_1013; phage(gi169257290) | 7e-155 | Click |
| 20 | 1068940..1069257 | PHAGE_Gifsy_2: hypothetical protein STM1023.Gifsy2; STM474_1014; phage(gi169257291) | 1e-58 | Click |
| 21 | 1069431..1069556 | PHAGE_Gifsy_2: hypothetical protein STM1024.Gifsy2; STM474_1015; phage(gi169257292) | 1e-17 | Click |
| 22 | complement(1069692..1070141) | PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; STM474_1016; phage(gi169257293) | 6e-84 | Click |
| 23 | complement(1070502..1071188) | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; STM474_1017; phage(gi169257294) | 2e-134 | Click |
| 24 | 1071545..1071793 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; STM474_1018; phage(gi169257295) | 5e-41 | Click |
| 25 | 1071765..1072229 | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; STM474_1019; phage(gi169257296) | 3e-83 | Click |
| 26 | 1072226..1072726 | PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; STM474_1020; phage(gi169257297) | 1e-86 | Click |
| 27 | 1072934..1073467 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; STM474_1021; phage(gi169257298) | 1e-95 | Click |
| 28 | 1073421..1075562 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, large subunit; STM474_1022; phage(gi169257299) | 0.0 | Click |
| 29 | 1075975..1077309 | PHAGE_Gifsy_2: bacteriophage portal protein; STM474_1023; phage(gi169257301) | 0.0 | Click |
| 30 | 1077185..1079314 | PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; STM474_1024; phage(gi169257302) | 0.0 | Click |
| 31 | 1079405..1079728 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM474_1025; phage(gi169257303) | 3e-55 | Click |
| 32 | 1079721..1080020 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM474_1026; phage(gi169257304) | 6e-52 | Click |
| 33 | 1080001..1080567 | PHAGE_Gifsy_2: bacteriophage morphogenesis protein; Lambda gpZ homolog; STM474_1027; phage(gi169257305) | 3e-103 | Click |
| 34 | 1080564..1080965 | PHAGE_Gifsy_2: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM474_1028; phage(gi169257306) | 3e-72 | Click |
| 35 | 1080920..1081726 | PHAGE_Gifsy_2: bacteriophage major tail protein; Lambda gpV homolog; STM474_1029; phage(gi169257307) | 1e-140 | Click |
| 36 | 1081772..1082170 | PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM474_1030; phage(gi169257308) | 8e-70 | Click |
| 37 | 1082140..1082496 | PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; STM474_1031; phage(gi169257309) | 8e-63 | Click |
| 38 | 1082477..1085563 | PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM474_1032; phage(gi169257310) | 0.0 | Click |
| 39 | 1085560..1085892 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM474_1033; phage(gi169257311) | 2e-61 | Click |
| 40 | 1085991..1086488 | PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; STM474_1034; phage(gi169257312) | 3e-93 | Click |
| 41 | complement(1086605..1087138) | PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; STM474_1035; phage(gi169257313) | 3e-102 | Click |
| 42 | 1087228..1087923 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM474_1036; phage(gi169257314) | 1e-135 | Click |
| 43 | 1087933..1088670 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; STM474_1037; phage(gi169257315) | 3e-152 | Click |
| 44 | 1088568..1089272 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM474_1038; phage(gi169257316) | 5e-129 | Click |
| 45 | 1089344..1092694 | PHAGE_Gifsy_2: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; STM474_1039; phage(gi169257317) | 0.0 | Click |
| 46 | 1092733..1092975 | PHAGE_Gifsy_2: hypothetical protein STM1049.2n.Gifsy2; STM474_1040; phage(gi169257319) | 3e-40 | Click |
| 47 | 1093029..1095236 | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STM474_1041; phage(gi169257320) | 0.0 | Click |
| 48 | 1095236..1095817 | PHAGE_Gifsy_2: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STM474_1042; phage(gi169257321) | 3e-111 | Click |
| 49 | 1096293..1097261 | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; STM474_1043; phage(gi169257322) | 0.0 | Click |
| 50 | complement(1097909..1098535) | PHAGE_Pseudo_F116: hypothetical protein F116p67; STM474_1044; phage(gi56692976) | 7e-31 | Click |
| 51 | 1098511..1098666 | hypothetical protein; STM474_1045 | N/A | Click |
| 52 | complement(1098604..1098903) | Gifsy-2 prophage protein; STM474_1046 | N/A | Click |
| 53 | complement(1098888..1099574) | Gifsy-2 prophage protein; STM474_1047 | N/A | Click |
| 54 | complement(1099845..1100036) | PHAGE_Entero_mEp390: DinI-like family protein; STM474_1048; phage(gi428782688) | 6e-25 | Click |
Region 3, total : 24 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1915442..1915771 | PHAGE_Entero_mEp235: integrase; STM474_1887; phage(gi428781836) | 2e-16 | Click |
| 2 | 1915906..1915928 | attL AAAAAGAGACCGAATACGATTCC | N/A | Click |
| 3 | 1917075..1917989 | integral membrane protein; STM474_1888 | N/A | Click |
| 4 | 1918122..1918280 | putative inner membrane protein; STM474_1889 | N/A | Click |
| 5 | 1918290..1918904 | putative inner membrane protein; STM474_1890 | N/A | Click |
| 6 | 1919392..1919538 | hypothetical protein; STM474_1891 | N/A | Click |
| 7 | complement(1919657..1919839) | PagM; STM474_1892 | N/A | Click |
| 8 | complement(1920052..1920177) | arsenical pump membrane protein; STM474_1893 | N/A | Click |
| 9 | 1920747..1920947 | PHAGE_Gifsy_1: PagK-like protein; STM474_1894; phage(gi169257211) | 3e-34 | Click |
| 10 | complement(1921044..1921925) | PHAGE_Salmon_1: putative bacteriophage tail assembly protein; STM474_1895; phage(gi169257205) | 4e-73 | Click |
| 11 | complement(1922080..1922343) | PHAGE_Salmon_1: bacteriophage terminase, small subunit; STM474_1896; phage(gi169257184) | 7e-43 | Click |
| 12 | 1922464..1922586 | hypothetical protein; STM474_1897 | N/A | Click |
| 13 | 1922651..1922818 | lytic enzyme; STM474_1898 | N/A | Click |
| 14 | 1922971..1923090 | hypothetical protein; STM474_1899 | N/A | Click |
| 15 | complement(1923075..1923608) | PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STM474_1900; phage(gi16765210) | 5e-95 | Click |
| 16 | complement(1923662..1923949) | PHAGE_Salmon_1: putative bacteriophage endolysin; STM474_1901; phage(gi169257182) | 7e-30 | Click |
| 17 | 1923923..1924576 | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; STM474_1902; phage(gi169257272) | 2e-16 | Click |
| 18 | 1924594..1925490 | PHAGE_Entero_mEp235: integrase; STM474_1903; phage(gi428781836) | 6e-68 | Click |
| 19 | 1925621..1925643 | attR AAAAAGAGACCGAATACGATTCC | N/A | Click |
| 20 | complement(1925687..1925806) | putative cytoplasmic protein; STM474_1904 | N/A | Click |
| 21 | complement(1925864..1926217) | PHAGE_Entero_PsP3: gp28; STM474_1905; phage(gi41057381) | 4e-08 | Click |
| 22 | complement(1926234..1927109) | putative inner membrane protein; STM474_1906 | N/A | Click |
| 23 | complement(1927110..1927490) | hypothetical protein; STM474_1907 | N/A | Click |
| 24 | 1927622..1927852 | PHAGE_Pectob_ZF40: putative DNA polymerase; STM474_1908; phage(gi422936677) | 6e-17 | Click |
| 25 | 1927960..1928616 | putative amidohydrolase; STM474_1909 | N/A | Click |
| 26 | 1928640..1929338 | PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; STM474_1910; phage(gi414087193) | 2e-15 | Click |
Region 4, total : 52 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2037460..2038728) | PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; STM474_2029; phage(gi399528790) | 0.0 | Click |
| 2 | complement(2038731..2039150) | PHAGE_Salmon_vB_SosS_Oslo: errror-prone repair protein UmuD; STM474_2030; phage(gi399528789) | 1e-31 | Click |
| 3 | complement(2039277..2039438) | putative cytoplasmic protein; STM474_2031 | N/A | Click |
| 4 | 2040485..2040496 | attL TAGCGTAAGGGT | N/A | Click |
| 5 | 2040503..2041510 | PHAGE_Salmon_ST64B: hypothetical protein sb26; STM474_2032; phage(gi23505470) | 0.0 | Click |
| 6 | complement(2041795..2042121) | PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; STM474_2033; phage(gi23505469) | 7e-59 | Click |
| 7 | complement(2042364..2043926) | PHAGE_Salmon_ST64B: tail protein; STM474_2034; phage(gi23505468) | 0.0 | Click |
| 8 | complement(2043913..2044500) | PHAGE_Salmon_ST64B: putative tail protein; STM474_2035; phage(gi23505467) | 2e-115 | Click |
| 9 | 2045447..2045458 | attL GCAGCCTGTACC | N/A | Click |
| 10 | complement(2045576..2045989) | PHAGE_Salmon_ST64B: putative tail protein; STM474_2038; phage(gi23505464) | 2e-77 | Click |
| 11 | complement(2045994..2046527) | PHAGE_Salmon_ST64B: putative base plate assembly protein; STM474_2039; phage(gi23505463) | 3e-99 | Click |
| 12 | complement(2046527..2047585) | PHAGE_Salmon_ST64B: Tail protein; STM474_2040; phage(gi23505462) | 0.0 | Click |
| 13 | complement(2047582..2048922) | PHAGE_Salmon_ST64B: tail/DNA circulation protein; STM474_2041; phage(gi23505461) | 0.0 | Click |
| 14 | complement(2048956..2050884) | PHAGE_Salmon_ST64B: tail protein; STM474_2042; phage(gi23505460) | 0.0 | Click |
| 15 | complement(2050969..2051295) | PHAGE_Salmon_ST64B: hypothetical protein sb15; STM474_2043; phage(gi23505501) | 1e-55 | Click |
| 16 | complement(2051292..2051570) | PHAGE_Salmon_ST64B: Tail tube protein; STM474_2044; phage(gi23505459) | 2e-49 | Click |
| 17 | complement(2051648..2053144) | PHAGE_Salmon_ST64B: Tail Sheath protein; STM474_2045; phage(gi23505458) | 0.0 | Click |
| 18 | complement(2053302..2053802) | PHAGE_Salmon_ST64B: hypothetical protein sb11; STM474_2046; phage(gi23505456) | 5e-95 | Click |
| 19 | complement(2053859..2054371) | PHAGE_Salmon_ST64B: hypothetical protein sb10; STM474_2047; phage(gi23505455) | 3e-97 | Click |
| 20 | complement(2054343..2054747) | PHAGE_Salmon_ST64B: hypothetical protein sb9; STM474_2048; phage(gi23505454) | 8e-74 | Click |
| 21 | complement(2054744..2055067) | PHAGE_Salmon_ST64B: hypothetical protein sb8; STM474_2049; phage(gi23505453) | 5e-57 | Click |
| 22 | complement(2055070..2055270) | PHAGE_Salmon_ST64B: hypothetical protein sb7; STM474_2050; phage(gi23505452) | 2e-31 | Click |
| 23 | complement(2055321..2056526) | PHAGE_Salmon_ST64B: Major capsid protein precursor; STM474_2051; phage(gi23505451) | 0.0 | Click |
| 24 | complement(2056541..2057227) | PHAGE_Salmon_ST64B: Pro-head protease; STM474_2052; phage(gi23505450) | 3e-127 | Click |
| 25 | complement(2057169..2058413) | PHAGE_Salmon_ST64B: Portal Protein; STM474_2053; phage(gi23505449) | 0.0 | Click |
| 26 | complement(2058410..2058592) | PHAGE_Salmon_ST64B: putative integral membrane protein; STM474_2054; phage(gi23505448) | 1e-29 | Click |
| 27 | complement(2058604..2060337) | PHAGE_Salmon_ST64B: Terminase large subunit; STM474_2055; phage(gi23505447) | 0.0 | Click |
| 28 | complement(2060334..2060828) | PHAGE_Salmon_ST64B: terminase small subunit; STM474_2056; phage(gi23505446) | 9e-93 | Click |
| 29 | complement(2060954..2061304) | PHAGE_Salmon_ST64B: hypothetical protein sb56; STM474_2057; phage(gi23505500) | 3e-68 | Click |
| 30 | complement(2061887..2062306) | PHAGE_Salmon_ST64B: hypothetical protein sb54; STM474_2058; phage(gi23505498) | 1e-73 | Click |
| 31 | complement(2062519..2063004) | PHAGE_Salmon_ST64B: lysis protein; STM474_2059; phage(gi23505497) | 2e-86 | Click |
| 32 | complement(2063001..2063615) | PHAGE_Salmon_ST64B: lytic enzyme (putative glycohydrolase); STM474_2060; phage(gi23505496) | 2e-116 | Click |
| 33 | complement(2063618..2063962) | PHAGE_Salmon_ST64B: lysis protein (holin); STM474_2061; phage(gi23505495) | 5e-46 | Click |
| 34 | 2064003..2064131 | hypothetical protein; STM474_2062 | N/A | Click |
| 35 | 2064124..2064558 | phage protein; STM474_2063 | N/A | Click |
| 36 | complement(2064878..2065198) | PHAGE_Salmon_ST64B: hypothetical protein sb49; STM474_2064; phage(gi23505493) | 2e-57 | Click |
| 37 | complement(2065512..2066507) | PHAGE_Salmon_ST64B: hypothetical protein sb47; STM474_2065; phage(gi23505491) | 3e-138 | Click |
| 38 | complement(2066509..2067369) | PHAGE_Salmon_ST64B: hypothetical protein sb46; STM474_2066; phage(gi23505490) | 8e-165 | Click |
| 39 | complement(2067772..2068665) | PHAGE_Salmon_ST64B: putative DNA methyltransferase; STM474_2068; phage(gi23505488) | 3e-175 | Click |
| 40 | complement(2069149..2069967) | PHAGE_Salmon_ST64B: putative replication protein; STM474_2069; phage(gi23505486) | 5e-158 | Click |
| 41 | complement(2070185..2071342) | PHAGE_Salmon_ST64B: putative antirepressor; STM474_2070; phage(gi23505485) | 0.0 | Click |
| 42 | complement(2071339..2071893) | PHAGE_Salmon_ST64B: hypothetical protein sb40; STM474_2071; phage(gi23505484) | 4e-47 | Click |
| 43 | 2072244..2072939 | PHAGE_Salmon_ST64B: regulatory protein; STM474_2072; phage(gi23505482) | 4e-129 | Click |
| 44 | 2073754..2074125 | PHAGE_Salmon_ST64B: hypothetical protein sb37; STM474_2073; phage(gi23505481) | 2e-66 | Click |
| 45 | 2074183..2075010 | PHAGE_Salmon_ST64B: hypothetical protein sb36; STM474_2074; phage(gi23505480) | 2e-154 | Click |
| 46 | 2075147..2075686 | PHAGE_Salmon_ST64B: hypothetical protein sb35; STM474_2075; phage(gi23505479) | 7e-100 | Click |
| 47 | 2076496..2077113 | PHAGE_Salmon_ST64B: hypothetical protein sb32; STM474_2076; phage(gi23505476) | 2e-116 | Click |
| 48 | 2077110..2077943 | PHAGE_Salmon_ST64B: hypothetical protein sb31; STM474_2077; phage(gi23505475) | 6e-164 | Click |
| 49 | 2078019..2078516 | PHAGE_Salmon_ST64B: Endodeoxyribonuclease; STM474_2078; phage(gi23505474) | 2e-95 | Click |
| 50 | 2078785..2079774 | PHAGE_Salmon_ST64B: Integrase protein; STM474_2079; phage(gi23505472) | 0.0 | Click |
| 51 | complement(2079888..2079977) | tRNA | N/A | Click |
| 52 | 2080066..2080863 | putative inner membrane protein; STM474_2081 | N/A | Click |
| 53 | 2080964..2081039 | tRNA | N/A | Click |
| 54 | 2081934..2082009 | tRNA | N/A | Click |
| 55 | 2082173..2082646 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; STM474_2084; phage(gi89152430) | 5e-45 | Click |
| 56 | complement(2082744..2082878) | hypothetical protein; STM474_2085 | N/A | Click |
| 57 | 2082985..2082996 | attR GCAGCCTGTACC | N/A | Click |
| 58 | 2083094..2083819 | PROPHAGE_Salmon_LT2: integrase; STM474_2086; phage(gi16766072) | 2e-39 | Click |
| 59 | 2090551..2090562 | attR TAGCGTAAGGGT | N/A | Click |
Region 5, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2328677..2329147) | PHAGE_Entero_P1: HumD; STM474_2323; phage(gi46401723) | 6e-51 | Click |
| 2 | 2329208..2329498 | PHAGE_Klebsi_phiKO2: Gp22; STM474_2325; phage(gi46402108) | 1e-25 | Click |
| 3 | 2329846..2331675 | PHAGE_Salmon_c341: O-polysaccharide acetyltransferase protein; STM474_2326; phage(gi255252697) | 5e-68 | Click |
| 4 | complement(2331729..2332172) | PHAGE_Entero_mEp213: tail fiber assembly protein; STM474_2327; phage(gi428782612) | 5e-15 | Click |
| 5 | complement(2332550..2333077) | PHAGE_Sodali_phiSG1: putative phage tail fiber assembly protein; STM474_2328; phage(gi89886004) | 1e-13 | Click |
| 6 | complement(2333080..2334381) | PHAGE_Entero_SfV: hypothetical protein SfVp21; STM474_2329; phage(gi19548989) | 2e-20 | Click |
| 7 | complement(2334382..2334900) | PHAGE_Entero_SfV: capsid protease; STM474_2330; phage(gi19548994) | 7e-76 | Click |
| 8 | complement(2334914..2335243) | PHAGE_Entero_SfV: holin; STM474_2331; phage(gi19549036) | 9e-38 | Click |
| 9 | 2335540..2336871 | KAP P-loop domain-containing protein; STM474_2332 | N/A | Click |
| 10 | complement(2336900..2337268) | PHAGE_Entero_cdtI: antitermination protein Q; STM474_2333; phage(gi148609434) | 6e-54 | Click |
| 11 | complement(2337283..2338278) | PHAGE_Entero_SfV: hypothetical protein SfVp45; STM474_2334; phage(gi19549032) | 6e-157 | Click |
| 12 | complement(2338280..2338510) | PHAGE_Entero_SfV: hypothetical protein SfVp44; STM474_2335; phage(gi19549031) | 4e-35 | Click |
| 13 | complement(2338601..2340967) | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; STM474_2336; phage(gi169257322) | 1e-73 | Click |
| 14 | complement(2341136..2341339) | bacteriophage tail fiber assembly protein; STM474_2337 | N/A | Click |
| 15 | complement(2341285..2341404) | hypothetical protein; STM474_2338 | N/A | Click |
| 16 | complement(2341636..2342427) | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STM474_2339; phage(gi169257320) | 3e-72 | Click |
| 17 | 2342616..2342933 | PHAGE_Entero_HK225: DNA damage-inducible protein; STM474_2340; phage(gi428782403) | 9e-05 | Click |
Region 6, total : 60 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2726693..2728186 | PHAGE_Gifsy_1: leucine-rich repeat protein; STM474_2689; phage(gi169257209) | 0.0 | Click |
| 2 | complement(2728390..2728518) | hypothetical protein; STM474_2690 | N/A | Click |
| 3 | 2729043..2729588 | PHAGE_Gifsy_1: hypothetical protein STM2585.Gifsy1; STM474_2691; phage(gi169257210) | 1e-101 | Click |
| 4 | complement(2729509..2729628) | PROPHAGE_Xantho_306: ISxac2 transposase; STM474_2692; phage(gi21244662) | 5e-05 | Click |
| 5 | 2729773..2729784 | attL ACAAAAACCATG | N/A | Click |
| 6 | 2730727..2730927 | PHAGE_Gifsy_1: PagK-like protein; STM474_2693; phage(gi169257211) | 7e-35 | Click |
| 7 | complement(2731024..2731602) | PHAGE_Gifsy_1: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STM474_2694; phage(gi169257212) | 1e-110 | Click |
| 8 | complement(2731592..2732416) | PHAGE_Gifsy_1: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; STM474_2695; phage(gi169257213) | 2e-161 | Click |
| 9 | complement(2732413..2734785) | PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STM474_2696; phage(gi169257214) | 0.0 | Click |
| 10 | complement(2734839..2735081) | PHAGE_Gifsy_1: hypothetical protein STM2589.1n.Gifsy1; STM474_2697; phage(gi169257215) | 4e-40 | Click |
| 11 | complement(2735120..2738482) | PHAGE_Gifsy_1: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STM474_2698; phage(gi169257216) | 0.0 | Click |
| 12 | complement(2738544..2739191) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM474_2699; phage(gi169257217) | 6e-121 | Click |
| 13 | complement(2739089..2739724) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpK homolog; STM474_2700; phage(gi169257218) | 2e-123 | Click |
| 14 | complement(2739833..2740534) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM474_2701; phage(gi169257219) | 7e-136 | Click |
| 15 | complement(2740541..2740870) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM474_2702; phage(gi169257220) | 2e-61 | Click |
| 16 | complement(2740873..2743968) | PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM474_2703; phage(gi169257221) | 0.0 | Click |
| 17 | complement(2743940..2744278) | PHAGE_Gifsy_1: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STM474_2704; phage(gi169257222) | 3e-61 | Click |
| 18 | complement(2744275..2744670) | PHAGE_Gifsy_1: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM474_2705; phage(gi169257223) | 2e-70 | Click |
| 19 | complement(2744721..2745467) | PHAGE_Gifsy_1: bacteriophage major tail subunit; Lambda gpV homolog; STM474_2706; phage(gi169257224) | 5e-138 | Click |
| 20 | complement(2745475..2745876) | PHAGE_Gifsy_1: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM474_2707; phage(gi169257225) | 2e-73 | Click |
| 21 | 2745865..2747115 | PHAGE_Gifsy_1: transposase; STM474_2708; phage(gi169257226) | 0.0 | Click |
| 22 | complement(2747164..2747742) | PHAGE_Gifsy_1: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STM474_2709; phage(gi169257227) | 7e-104 | Click |
| 23 | complement(2747770..2748153) | PHAGE_Gifsy_1: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STM474_2710; phage(gi169257228) | 1e-68 | Click |
| 24 | complement(2748164..2748523) | PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STM474_2711; phage(gi169257229) | 4e-62 | Click |
| 25 | complement(2748581..2749609) | PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; STM474_2712; phage(gi169257230) | 0.0 | Click |
| 26 | complement(2749664..2750011) | PHAGE_Gifsy_1: bacteriophage head decoration protein; Lambda gpD homolog; STM474_2713; phage(gi169257231) | 2e-61 | Click |
| 27 | complement(2750024..2751520) | PHAGE_Gifsy_1: bacteriophage prohead protease; Lambda gpC homolog; STM474_2714; phage(gi169257232) | 0.0 | Click |
| 28 | complement(2751510..2753129) | PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; STM474_2715; phage(gi169257233) | 0.0 | Click |
| 29 | complement(2753087..2753290) | PHAGE_Gifsy_1: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STM474_2716; phage(gi169257234) | 2e-31 | Click |
| 30 | complement(2753274..2755205) | PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STM474_2717; phage(gi169257235) | 0.0 | Click |
| 31 | complement(2755177..2755722) | PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STM474_2718; phage(gi169257236) | 2e-87 | Click |
| 32 | 2756009..2756410 | PHAGE_Gifsy_1: hypothetical protein STM2610.Gifsy1; STM474_2719; phage(gi169257237) | 9e-72 | Click |
| 33 | complement(2756646..2757119) | PHAGE_Gifsy_1: bacteriophage lysis protein; Rz; STM474_2720; phage(gi169257238) | 6e-80 | Click |
| 34 | complement(2757116..2757580) | PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; STM474_2721; phage(gi169257239) | 5e-82 | Click |
| 35 | complement(2757552..2757800) | PHAGE_Gifsy_1: bacteriophage lysis protein; holin; STM474_2722; phage(gi169257240) | 5e-41 | Click |
| 36 | 2758157..2758843 | PHAGE_Gifsy_1: virulence protein GogA; STM474_2723; phage(gi169257241) | 9e-134 | Click |
| 37 | complement(2759058..2759246) | PHAGE_Gifsy_1: hypothetical protein STM2615.1n.Gifsy1; STM474_2724; phage(gi169257242) | 2e-33 | Click |
| 38 | complement(2759335..2759411) | tRNA | N/A | Click |
| 39 | complement(2759753..2760316) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM474_2726; phage(gi169257243) | 1e-103 | Click |
| 40 | complement(2760589..2761266) | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; STM474_2727; phage(gi169257244) | 3e-130 | Click |
| 41 | complement(2761263..2761403) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM474_2728; phage(gi169257245) | 7e-21 | Click |
| 42 | complement(2761400..2762017) | PHAGE_Gifsy_1: NinG; STM474_2729; phage(gi169257246) | 2e-115 | Click |
| 43 | complement(2762014..2762223) | PHAGE_Gifsy_1: hypothetical protein STM2620.1n.Gifsy1; STM474_2730; phage(gi169257247) | 9e-35 | Click |
| 44 | complement(2762220..2762822) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM474_2731; phage(gi169257248) | 3e-110 | Click |
| 45 | complement(2762857..2762973) | PHAGE_Entero_mEp237: hypothetical protein; STM474_2732; phage(gi435439314) | 2e-15 | Click |
| 46 | complement(2763222..2763455) | PHAGE_Gifsy_1: bacteriophage putative DNA damage-inducible protein; DinI homolog; STM474_2733; phage(gi169257250) | 2e-38 | Click |
| 47 | complement(2764017..2764298) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p54; STM474_2734; phage(gi89152468) | 8e-49 | Click |
| 48 | complement(2764291..2764944) | PHAGE_Entero_P22: EaA; STM474_2735; phage(gi9635497) | 3e-56 | Click |
| 49 | complement(2764947..2765417) | PHAGE_Pectob_ZF40: putative methylase; STM474_2736; phage(gi422936660) | 8e-69 | Click |
| 50 | complement(2765419..2766084) | PHAGE_Salmon_epsilon34: EaD-like protein; STM474_2737; phage(gi221328645) | 1e-27 | Click |
| 51 | complement(2766099..2766791) | PHAGE_Escher_HK639: replication protein 14; STM474_2738; phage(gi356870655) | 4e-81 | Click |
| 52 | complement(2766788..2767693) | PHAGE_Entero_lambda: DNA replication protein; STM474_2739; phage(gi9626295) | 8e-97 | Click |
| 53 | complement(2767785..2768195) | PHAGE_Gifsy_1: probable regulatory protein; transcriptional activator; lambda CII analog; STM474_2740; phage(gi169257256) | 4e-65 | Click |
| 54 | 2768447..2768833 | PHAGE_Entero_mEp237: prophage repressor; STM474_2741; phage(gi435439304) | 4e-61 | Click |
| 55 | 2768985..2770070 | PHAGE_Pseudo_phi297: putative ParA protein; STM474_2742; phage(gi374531271) | 5e-62 | Click |
| 56 | 2770675..2770791 | PHAGE_Gifsy_1: hypothetical protein STM2630.1n.Gifsy1; STM474_2743; phage(gi169257259) | 2e-14 | Click |
| 57 | 2770784..2770954 | PHAGE_Gifsy_1: hypothetical protein STM2630.Gifsy1; STM474_2744; phage(gi169257260) | 5e-12 | Click |
| 58 | 2771095..2774295 | PHAGE_Gifsy_1: bacteriophage exodeoxyribonuclease VIII-like protein; STM474_2745; phage(gi169257262) | 0.0 | Click |
| 59 | 2774258..2775415 | PHAGE_Gifsy_1: RecT; STM474_2746; phage(gi169257263) | 0.0 | Click |
| 60 | 2775458..2775697 | PHAGE_Gifsy_1: hypothetical protein STM2634.Gifsy1; STM474_2747; phage(gi169257264) | 7e-40 | Click |
| 61 | 2775738..2776022 | PHAGE_Gifsy_1: hypothetical protein STM2635.Gifsy1; STM474_2748; phage(gi169257265) | 8e-52 | Click |
| 62 | complement(2776000..2777229) | PHAGE_Gifsy_1: bacteriophage integrase protein; STM474_2749; phage(gi169257266) | 0.0 | Click |
| 63 | 2777303..2777314 | attR ACAAAAACCATG | N/A | Click |
Region 7, total : 12 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2813909..2815129 | PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; STM474_2785; phage(gi399529005) | 2e-08 | Click |
| 2 | 2815215..2815226 | attL ATAAAAAAGGGG | N/A | Click |
| 3 | complement(2815382..2816431) | PHAGE_Entero_PsP3: gp27; STM474_2786; phage(gi41057380) | 0.0 | Click |
| 4 | complement(2816803..2817798) | PHAGE_Entero_PsP3: CI; STM474_2787; phage(gi41057393) | 5e-114 | Click |
| 5 | 2817762..2818115 | PHAGE_Entero_PsP3: gp30; STM474_2788; phage(gi41057382) | 1e-61 | Click |
| 6 | 2818238..2818675 | PHAGE_Entero_PsP3: gp31; STM474_2789; phage(gi41057383) | 4e-77 | Click |
| 7 | 2818737..2818883 | PHAGE_Entero_PsP3: gp32; STM474_2790; phage(gi41057384) | 3e-21 | Click |
| 8 | 2818847..2819185 | PHAGE_Salmon_RE_2010: hypothetical protein; STM474_2791; phage(gi418489688) | 4e-37 | Click |
| 9 | 2819253..2819480 | PHAGE_Entero_PsP3: gp33; STM474_2792; phage(gi41057385) | 9e-24 | Click |
| 10 | 2819480..2819704 | PHAGE_Entero_PsP3: gp34; STM474_2793; phage(gi41057386) | 4e-37 | Click |
| 11 | 2820345..2823074 | PHAGE_Entero_PsP3: gp36; STM474_2794; phage(gi41057388) | 0.0 | Click |
| 12 | 2823088..2823573 | PHAGE_Entero_PsP3: gp25; STM474_2795; phage(gi41057377) | 1e-80 | Click |
| 13 | 2823570..2824736 | PHAGE_Entero_PsP3: gp26; STM474_2796; phage(gi41057378) | 0.0 | Click |
| 14 | 2825990..2826001 | attR ATAAAAAAGGGG | N/A | Click |
Region 8, total : 33 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2851713..2853893 | PHAGE_Bacill_SPBc2: ABC transporter; STM474_2814; phage(gi9630145) | 1e-29 | Click |
| 2 | 2853874..2855064 | type I secretion membrane fusion protein, HlyD family; STM474_2815 | N/A | Click |
| 3 | 2855136..2855498 | tRNA | N/A | Click |
| 4 | 2855546..2855689 | PHAGE_Salmon_RE_2010: hypothetical protein; STM474_2816; phage(gi418489728) | 2e-21 | Click |
| 5 | complement(2855616..2855834) | PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); STM474_2817; phage(gi169936018) | 2e-40 | Click |
| 6 | complement(2855903..2857003) | PHAGE_Entero_2: P2 gpD-like tail protein; STM474_2818; phage(gi169936019) | 0.0 | Click |
| 7 | complement(2857000..2857485) | PHAGE_Entero_2: P2 gpU-like tail protein; STM474_2819; phage(gi169936020) | 9e-87 | Click |
| 8 | complement(2857482..2860289) | PHAGE_Entero_2: P2 gpT-like tail protein; STM474_2820; phage(gi169936021) | 0.0 | Click |
| 9 | complement(2860282..2860401) | PHAGE_Entero_2: P2 gpE-like protein; STM474_2821; phage(gi169936022) | 9e-16 | Click |
| 10 | complement(2860416..2860718) | PHAGE_Entero_2: P2 gpE-like tail protein; STM474_2822; phage(gi169936023) | 4e-48 | Click |
| 11 | complement(2860773..2861288) | PHAGE_Entero_2: P2 gpFII-like protein; STM474_2823; phage(gi169936024) | 2e-94 | Click |
| 12 | complement(2861298..2862470) | PHAGE_Entero_2: P2 gpFI-like protein; STM474_2824; phage(gi169936025) | 0.0 | Click |
| 13 | complement(2862587..2862790) | PHAGE_Entero_2: DNA-invertase; STM474_2825; phage(gi169936026) | 3e-23 | Click |
| 14 | 2863004..2863726 | invasion-associated secreted protein; STM474_2826 | N/A | Click |
| 15 | complement(2863923..2864330) | PHAGE_Entero_2: P2 gpG-like protein; STM474_2827; phage(gi169936028) | 3e-66 | Click |
| 16 | complement(2864337..2865956) | PHAGE_Entero_2: P2 gpH-like protein; STM474_2828; phage(gi169936030) | 1e-160 | Click |
| 17 | complement(2865953..2866558) | PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; STM474_2829; phage(gi169936031) | 7e-115 | Click |
| 18 | complement(2866551..2867459) | PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; STM474_2830; phage(gi169936032) | 4e-164 | Click |
| 19 | complement(2867446..2867805) | PHAGE_Entero_2: P2 gpW-like baseplate protein; STM474_2831; phage(gi169936033) | 1e-60 | Click |
| 20 | complement(2867802..2868380) | PHAGE_Entero_2: P2 gpV-like protein; STM474_2832; phage(gi169936034) | 1e-110 | Click |
| 21 | complement(2868449..2868895) | PHAGE_Entero_2: P2 gpS-like tail completion protein; STM474_2833; phage(gi169936035) | 2e-75 | Click |
| 22 | complement(2868888..2869319) | PHAGE_Entero_2: P2 gpR-like tail completion protein; STM474_2834; phage(gi169936036) | 1e-76 | Click |
| 23 | complement(2869282..2869566) | PHAGE_Entero_2: P2 LysC-like protein; STM474_2835; phage(gi169936037) | 2e-49 | Click |
| 24 | complement(2869415..2869843) | PHAGE_Entero_2: P2 LysB-like protein; STM474_2836; phage(gi169936038) | 1e-74 | Click |
| 25 | complement(2869840..2870214) | PHAGE_Entero_2: hypothetical protein STM2714.2.Fels2; STM474_2837; phage(gi169936040) | 6e-31 | Click |
| 26 | complement(2870219..2870728) | PHAGE_Entero_2: endolysin; STM474_2838; phage(gi169936041) | 1e-88 | Click |
| 27 | complement(2870709..2870924) | PHAGE_Entero_2: lysis protein; STM474_2839; phage(gi169936042) | 2e-35 | Click |
| 28 | complement(2870928..2871131) | PHAGE_Entero_2: P2 gpX-like tail protein; STM474_2840; phage(gi169936043) | 1e-33 | Click |
| 29 | complement(2871131..2871658) | PHAGE_Entero_2: P2 gpL-like protein; STM474_2841; phage(gi169936044) | 7e-87 | Click |
| 30 | complement(2871689..2872342) | PHAGE_Entero_2: P2 gpM-like protein; STM474_2842; phage(gi169936045) | 3e-119 | Click |
| 31 | complement(2872346..2873428) | PHAGE_Entero_2: P2 gpN-like major capsid protein; STM474_2843; phage(gi169936046) | 0.0 | Click |
| 32 | complement(2873445..2874278) | PHAGE_Entero_2: P2 gpO-like protein; STM474_2844; phage(gi169936047) | 1e-145 | Click |
| 33 | 2874421..2876187 | PHAGE_Entero_2: P2 gpP-like protein; STM474_2845; phage(gi169936048) | 0.0 | Click |
| 34 | 2876187..2877218 | PHAGE_Entero_2: P2 gpQ-like protein; STM474_2846; phage(gi169936049) | 0.0 | Click |
Region 9, total : 61 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2838219..2838230 | attL TCGAAAATATAT | N/A | Click |
| 2 | 2851713..2853893 | PHAGE_Bacill_SPBc2: ABC transporter; STM474_2814; phage(gi9630145) | 1e-29 | Click |
| 3 | 2853874..2855064 | type I secretion membrane fusion protein, HlyD family; STM474_2815 | N/A | Click |
| 4 | 2855136..2855498 | tRNA | N/A | Click |
| 5 | 2855454..2855501 | attL ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT | N/A | Click |
| 6 | 2855546..2855689 | PHAGE_Salmon_RE_2010: hypothetical protein; STM474_2816; phage(gi418489728) | 2e-21 | Click |
| 7 | complement(2855616..2855834) | PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); STM474_2817; phage(gi169936018) | 2e-40 | Click |
| 8 | complement(2855903..2857003) | PHAGE_Entero_2: P2 gpD-like tail protein; STM474_2818; phage(gi169936019) | 0.0 | Click |
| 9 | complement(2857000..2857485) | PHAGE_Entero_2: P2 gpU-like tail protein; STM474_2819; phage(gi169936020) | 9e-87 | Click |
| 10 | complement(2857482..2860289) | PHAGE_Entero_2: P2 gpT-like tail protein; STM474_2820; phage(gi169936021) | 0.0 | Click |
| 11 | complement(2860282..2860401) | PHAGE_Entero_2: P2 gpE-like protein; STM474_2821; phage(gi169936022) | 9e-16 | Click |
| 12 | complement(2860416..2860718) | PHAGE_Entero_2: P2 gpE-like tail protein; STM474_2822; phage(gi169936023) | 4e-48 | Click |
| 13 | complement(2860773..2861288) | PHAGE_Entero_2: P2 gpFII-like protein; STM474_2823; phage(gi169936024) | 2e-94 | Click |
| 14 | complement(2861298..2862470) | PHAGE_Entero_2: P2 gpFI-like protein; STM474_2824; phage(gi169936025) | 0.0 | Click |
| 15 | complement(2862587..2862790) | PHAGE_Entero_2: DNA-invertase; STM474_2825; phage(gi169936026) | 3e-23 | Click |
| 16 | 2863004..2863726 | invasion-associated secreted protein; STM474_2826 | N/A | Click |
| 17 | complement(2863923..2864330) | PHAGE_Entero_2: P2 gpG-like protein; STM474_2827; phage(gi169936028) | 3e-66 | Click |
| 18 | complement(2864337..2865956) | PHAGE_Entero_2: P2 gpH-like protein; STM474_2828; phage(gi169936030) | 1e-160 | Click |
| 19 | complement(2865953..2866558) | PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; STM474_2829; phage(gi169936031) | 7e-115 | Click |
| 20 | complement(2866551..2867459) | PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; STM474_2830; phage(gi169936032) | 4e-164 | Click |
| 21 | complement(2867446..2867805) | PHAGE_Entero_2: P2 gpW-like baseplate protein; STM474_2831; phage(gi169936033) | 1e-60 | Click |
| 22 | complement(2867802..2868380) | PHAGE_Entero_2: P2 gpV-like protein; STM474_2832; phage(gi169936034) | 1e-110 | Click |
| 23 | complement(2868449..2868895) | PHAGE_Entero_2: P2 gpS-like tail completion protein; STM474_2833; phage(gi169936035) | 2e-75 | Click |
| 24 | complement(2868888..2869319) | PHAGE_Entero_2: P2 gpR-like tail completion protein; STM474_2834; phage(gi169936036) | 1e-76 | Click |
| 25 | complement(2869282..2869566) | PHAGE_Entero_2: P2 LysC-like protein; STM474_2835; phage(gi169936037) | 2e-49 | Click |
| 26 | complement(2869415..2869843) | PHAGE_Entero_2: P2 LysB-like protein; STM474_2836; phage(gi169936038) | 1e-74 | Click |
| 27 | complement(2869840..2870214) | PHAGE_Entero_2: hypothetical protein STM2714.2.Fels2; STM474_2837; phage(gi169936040) | 6e-31 | Click |
| 28 | complement(2870219..2870728) | PHAGE_Entero_2: endolysin; STM474_2838; phage(gi169936041) | 1e-88 | Click |
| 29 | complement(2870709..2870924) | PHAGE_Entero_2: lysis protein; STM474_2839; phage(gi169936042) | 2e-35 | Click |
| 30 | complement(2870928..2871131) | PHAGE_Entero_2: P2 gpX-like tail protein; STM474_2840; phage(gi169936043) | 1e-33 | Click |
| 31 | complement(2871131..2871658) | PHAGE_Entero_2: P2 gpL-like protein; STM474_2841; phage(gi169936044) | 7e-87 | Click |
| 32 | complement(2871689..2872342) | PHAGE_Entero_2: P2 gpM-like protein; STM474_2842; phage(gi169936045) | 3e-119 | Click |
| 33 | complement(2872346..2873428) | PHAGE_Entero_2: P2 gpN-like major capsid protein; STM474_2843; phage(gi169936046) | 0.0 | Click |
| 34 | complement(2873445..2874278) | PHAGE_Entero_2: P2 gpO-like protein; STM474_2844; phage(gi169936047) | 1e-145 | Click |
| 35 | 2874421..2876187 | PHAGE_Entero_2: P2 gpP-like protein; STM474_2845; phage(gi169936048) | 0.0 | Click |
| 36 | 2876187..2877218 | PHAGE_Entero_2: P2 gpQ-like protein; STM474_2846; phage(gi169936049) | 0.0 | Click |
| 37 | complement(2877245..2878222) | putative competence protein; STM474_2847 | N/A | Click |
| 38 | complement(2878212..2878694) | hypothetical protein; STM474_2848 | N/A | Click |
| 39 | complement(2879425..2880534) | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0304; STM474_2850; phage(gi41179236) | 6e-67 | Click |
| 40 | complement(2880640..2880873) | PHAGE_Entero_2: TumB protein; STM474_2851; phage(gi169936052) | 2e-34 | Click |
| 41 | complement(2880885..2881073) | PHAGE_Entero_2: hypothetical protein STM2728.Fels2; STM474_2852; phage(gi169936053) | 8e-25 | Click |
| 42 | complement(2881219..2881347) | hypothetical protein; STM474_2853 | N/A | Click |
| 43 | complement(2881397..2883640) | PHAGE_Entero_2: P2 gpA-like protein; STM474_2854; phage(gi169936054) | 0.0 | Click |
| 44 | complement(2883631..2884488) | PHAGE_Entero_2: DNA adenine methylase-like protein; STM474_2855; phage(gi169936055) | 2e-130 | Click |
| 45 | complement(2884712..2884939) | PHAGE_Entero_2: hypothetical protein STM2732.Fels2; STM474_2856; phage(gi169936057) | 7e-11 | Click |
| 46 | complement(2885007..2885348) | PHAGE_Entero_2: hypothetical protein STM2733.Fels2; STM474_2857; phage(gi169936058) | 2e-51 | Click |
| 47 | 2885673..2885810 | hypothetical protein; STM474_2858 | N/A | Click |
| 48 | complement(2885953..2886462) | PHAGE_Entero_2: bacteriophage regulatory protein CII; STM474_2859; phage(gi169936061) | 8e-89 | Click |
| 49 | complement(2886495..2886710) | PHAGE_Entero_2: bacteriophage regulatory protein Ap1; STM474_2860; phage(gi169936062) | 4e-19 | Click |
| 50 | 2886863..2887495 | PHAGE_Entero_2: P2 CI-like protein; STM474_2861; phage(gi169936063) | 7e-66 | Click |
| 51 | 2887497..2888522 | PHAGE_Entero_2: P2 Int-like protein; STM474_2862; phage(gi169936064) | 0.0 | Click |
| 52 | 2888519..2889730 | PHAGE_Salmon_RE_2010: hypothetical protein; STM474_2863; phage(gi418489682) | 4e-109 | Click |
| 53 | 2889844..2889891 | attR ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT | N/A | Click |
| 54 | 2890073..2891269 | PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STM474_2864; phage(gi16130540) | 7e-136 | Click |
| 55 | complement(2891273..2892970) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; STM474_2865; phage(gi9631364) | 7e-07 | Click |
| 56 | complement(2894442..2895008) | PHAGE_Entero_P4: amber mutation-suppressing protein; STM474_2866; phage(gi9627520) | 3e-59 | Click |
| 57 | complement(2895264..2895959) | PHAGE_Entero_P4: head size determination protein sid; STM474_2867; phage(gi9627518) | 7e-81 | Click |
| 58 | 2895927..2896202 | hypothetical protein; STM474_2868 | N/A | Click |
| 59 | 2896322..2896333 | attR TCGAAAATATAT | N/A | Click |
| 60 | 2896539..2896805 | PHAGE_Entero_P4: transcriptional regulator; STM474_2869; phage(gi9627517) | 2e-30 | Click |
| 61 | 2896970..2897353 | PHAGE_Entero_P4: putative CI repressor; STM474_2870; phage(gi9627516) | 5e-38 | Click |
| 62 | 2897350..2897577 | hypothetical protein; STM474_2871 | N/A | Click |
| 63 | 2897574..2897894 | PHAGE_Entero_P4: hypothetical protein P4p07; STM474_2872; phage(gi9627513) | 5e-53 | Click |
| 64 | 2897909..2900242 | PHAGE_Entero_P4: DNA primase; STM474_2873; phage(gi9627512) | 0.0 | Click |
| 65 | 2900734..2901798 | PROPHAGE_Entero_Fels-2: integrase-like protein; STM474_2874; phage(gi16766052) | 0.0 | Click |
| 66 | 2901812..2901979 | PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STM474_2875; phage(gi16130540) | 5e-09 | Click |
Region 10, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2879425..2880534) | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0304; STM474_2850; phage(gi41179236) | 6e-67 | Click |
| 2 | complement(2880640..2880873) | PHAGE_Salmon_RE_2010: SOS induction modulator; STM474_2851; phage(gi418489694) | 2e-34 | Click |
| 3 | complement(2880885..2881073) | PHAGE_Salmon_RE_2010: hypothetical protein; STM474_2852; phage(gi418489693) | 8e-25 | Click |
| 4 | complement(2881219..2881347) | hypothetical protein; STM474_2853 | N/A | Click |
| 5 | complement(2881397..2883640) | PHAGE_Entero_2: P2 gpA-like protein; STM474_2854; phage(gi169936054) | 0.0 | Click |
| 6 | complement(2883631..2884488) | PHAGE_Entero_2: DNA adenine methylase-like protein; STM474_2855; phage(gi169936055) | 2e-130 | Click |
| 7 | 2884586..2884597 | attL GAATGACTATTC | N/A | Click |
| 8 | complement(2884712..2884939) | PHAGE_Erwini_ENT90: putative prophage protein; STM474_2856; phage(gi431810987) | 7e-19 | Click |
| 9 | complement(2885007..2885348) | PHAGE_Entero_2: hypothetical protein STM2733.Fels2; STM474_2857; phage(gi169936058) | 2e-51 | Click |
| 10 | 2885673..2885810 | hypothetical protein; STM474_2858 | N/A | Click |
| 11 | complement(2885953..2886462) | PHAGE_Entero_2: bacteriophage regulatory protein CII; STM474_2859; phage(gi169936061) | 8e-89 | Click |
| 12 | complement(2886495..2886710) | PHAGE_Entero_2: bacteriophage regulatory protein Ap1; STM474_2860; phage(gi169936062) | 4e-19 | Click |
| 13 | 2886863..2887495 | PHAGE_Entero_2: P2 CI-like protein; STM474_2861; phage(gi169936063) | 7e-66 | Click |
| 14 | 2887497..2888522 | PHAGE_Salmon_RE_2010: integrase; STM474_2862; phage(gi418489683) | 0.0 | Click |
| 15 | 2888519..2889730 | PHAGE_Salmon_RE_2010: hypothetical protein; STM474_2863; phage(gi418489682) | 4e-109 | Click |
| 16 | 2890073..2891269 | PHAGE_Entero_P4: integrase; STM474_2864; phage(gi9627511) | 2e-66 | Click |
| 17 | complement(2891273..2892970) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; STM474_2865; phage(gi9631364) | 7e-07 | Click |
| 18 | complement(2894442..2895008) | PHAGE_Entero_P4: amber mutation-suppressing protein; STM474_2866; phage(gi9627520) | 3e-59 | Click |
| 19 | complement(2895264..2895959) | PHAGE_Entero_P4: head size determination protein sid; STM474_2867; phage(gi9627518) | 7e-81 | Click |
| 20 | 2895927..2896202 | hypothetical protein; STM474_2868 | N/A | Click |
| 21 | 2896310..2896321 | attL TTTGATTAAAAA | N/A | Click |
| 22 | 2896539..2896805 | PHAGE_Entero_P4: transcriptional regulator; STM474_2869; phage(gi9627517) | 2e-30 | Click |
| 23 | 2896970..2897353 | PHAGE_Entero_P4: putative CI repressor; STM474_2870; phage(gi9627516) | 5e-38 | Click |
| 24 | 2897350..2897577 | hypothetical protein; STM474_2871 | N/A | Click |
| 25 | 2897574..2897894 | PHAGE_Entero_P4: hypothetical protein P4p07; STM474_2872; phage(gi9627513) | 5e-53 | Click |
| 26 | 2897909..2900242 | PHAGE_Entero_P4: DNA primase; STM474_2873; phage(gi9627512) | 0.0 | Click |
| 27 | 2900734..2901798 | PHAGE_Entero_P4: integrase; STM474_2874; phage(gi9627511) | 2e-48 | Click |
| 28 | 2901812..2901979 | PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STM474_2875; phage(gi16130540) | 5e-09 | Click |
| 29 | 2908230..2908241 | attR TTTGATTAAAAA | N/A | Click |
| 30 | 2916904..2916915 | attR GAATGACTATTC | N/A | Click |
Region 11, total : 15 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2918334..2918351 | attL CGTCATACTTCAAGTTGC | N/A | Click |
| 2 | 2923005..2923880 | PROPHAGE_Salmon_LT2: integrase; STM474_2895; phage(gi16766072) | 4e-168 | Click |
| 3 | 2924046..2925920 | putative inner membrane protein; STM474_2896 | N/A | Click |
| 4 | complement(2926180..2927502) | putative inner membrane protein; STM474_2897 | N/A | Click |
| 5 | complement(2927700..2927858) | hypothetical protein; STM474_2898 | N/A | Click |
| 6 | complement(2929091..2929420) | PROPHAGE_Xantho_33913: ISxcC1 transposase; STM474_2899; phage(gi21231060) | 7e-34 | Click |
| 7 | complement(2929642..2929908) | PROPHAGE_Salmon_LT2: transposase; STM474_2900; phage(gi16766077) | 7e-45 | Click |
| 8 | complement(2930361..2930999) | putative cytoplasmic protein; STM474_2901 | N/A | Click |
| 9 | complement(2930996..2932978) | putative DNA/RNA helicase; STM474_2902 | N/A | Click |
| 10 | 2933257..2933556 | PROPHAGE_Escher_MG1655: IS3 transposase A; STM474_2903; phage(gi226524700) | 2e-41 | Click |
| 11 | 2933553..2934419 | PROPHAGE_Escher_MG1655: IS3 transposase B; STM474_2904; phage(gi16128284) | 3e-145 | Click |
| 12 | complement(2935199..2935738) | PHAGE_Salmon_SSU5: putative repressor of phase 1 flagellin; STM474_2905; phage(gi390013956) | 9e-13 | Click |
| 13 | complement(2935806..2937326) | PHAGE_Escher_phiKT: tail fiber protein; STM474_2906; phage(gi422936632) | 1e-07 | Click |
| 14 | 2937418..2937990 | PHAGE_Escher_D108: G region invertase; STM474_2907; phage(gi281199698) | 4e-67 | Click |
| 15 | 2938953..2940068 | putative glycosyl transferase; STM474_2908 | N/A | Click |
| 16 | 2940149..2943802 | PHAGE_Bacill_SPBc2: ABC transporter; STM474_2909; phage(gi9630145) | 2e-25 | Click |
| 17 | 2950601..2950618 | attR CGTCATACTTCAAGTTGC | N/A | Click |
Region 12, total : 27 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(4439208..4439936) | PHAGE_Entero_P1: PmgQ; STM474_4387; phage(gi46401711) | 7e-34 | Click |
| 2 | complement(4440133..4440423) | putative inner membrane protein; STM474_4388 | N/A | Click |
| 3 | complement(4440672..4441127) | PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; STM474_4389; phage(gi418489075) | 2e-24 | Click |
| 4 | complement(4441124..4441729) | putative cytoplasmic protein; STM474_4390 | N/A | Click |
| 5 | complement(4441734..4443479) | PHAGE_Entero_PsP3: gp19; STM474_4391; phage(gi41057371) | 1e-78 | Click |
| 6 | complement(4443482..4444114) | PHAGE_Burkho_BcepMu: gp51; STM474_4392; phage(gi48696961) | 4e-26 | Click |
| 7 | complement(4444107..4445222) | PHAGE_Burkho_BcepMu: gp50; STM474_4393; phage(gi48696960) | 2e-105 | Click |
| 8 | complement(4445213..4445572) | PHAGE_Burkho_BcepMu: gp49; STM474_4394; phage(gi48696959) | 1e-35 | Click |
| 9 | 4445633..4445755 | hypothetical protein; STM474_4395 | N/A | Click |
| 10 | complement(4445736..4447283) | PHAGE_Salmon_epsilon34: GtrC; putative membrane protein; STM474_4396; phage(gi221328637) | 2e-59 | Click |
| 11 | complement(4447283..4448212) | PHAGE_Entero_SfV: bactoprenol glucosyltransferase; STM474_4397; phage(gi19549012) | 3e-152 | Click |
| 12 | complement(4448209..4448583) | PHAGE_Entero_SfV: putative flippase; STM474_4398; phage(gi19549013) | 7e-48 | Click |
| 13 | complement(4448899..4449621) | PHAGE_Burkho_BcepMu: gp48; STM474_4399; phage(gi48696958) | 2e-39 | Click |
| 14 | complement(4449631..4450674) | PHAGE_Burkho_BcepMu: gp47; STM474_4400; phage(gi48696957) | 9e-81 | Click |
| 15 | complement(4450662..4450871) | PHAGE_Burkho_BcepMu: gp46; STM474_4401; phage(gi48696956) | 9e-19 | Click |
| 16 | complement(4450871..4451824) | PHAGE_Burkho_BcepMu: gp45; STM474_4402; phage(gi48696955) | 1e-45 | Click |
| 17 | complement(4451824..4454178) | PHAGE_Burkho_BcepMu: gp44; STM474_4403; phage(gi48696954) | 1e-68 | Click |
| 18 | complement(4454275..4454403) | hypothetical protein; STM474_4404 | N/A | Click |
| 19 | complement(4454363..4454680) | PHAGE_Burkho_BcepMu: gp41; STM474_4405; phage(gi48696951) | 4e-10 | Click |
| 20 | complement(4454732..4455256) | PHAGE_Burkho_BcepMu: gp40; STM474_4406; phage(gi48696950) | 1e-68 | Click |
| 21 | complement(4455256..4456683) | PHAGE_Burkho_BcepMu: gp39; STM474_4407; phage(gi48696949) | 0.0 | Click |
| 22 | complement(4456673..4456870) | PHAGE_Burkho_BcepMu: gp38; STM474_4408; phage(gi48696948) | 2e-08 | Click |
| 23 | complement(4456867..4457322) | PHAGE_Burkho_BcepMu: gp37; STM474_4409; phage(gi48696947) | 2e-13 | Click |
| 24 | complement(4457482..4457796) | PHAGE_Burkho_BcepMu: gp25; STM474_4410; phage(gi48696935) | 3e-23 | Click |
| 25 | complement(4457809..4458414) | PHAGE_Burkho_BcepMu: gp22; STM474_4411; phage(gi48696932) | 7e-57 | Click |
| 26 | complement(4458417..4458704) | PHAGE_Burkho_BcepMu: gp21; STM474_4412; phage(gi48696931) | 7e-21 | Click |
| 27 | 4459280..4459627 | PHAGE_Burkho_BcepMu: gp01; STM474_4413; phage(gi48696911) | 7e-24 | Click |