Definition Streptococcus suis JS14, complete genome.
Accession CP002465
Length 2,137,435
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 643827..643838  attL    TTGCTCAATTTT  N/A  Click
2 654679..656484  PHAGE_Bacill_WBeta: putative site-specific recombinase; SSUJS14_0630; phage(gi85701406)  3e-38  Click
3 656852..657022  hypothetical protein; SSUJS14_0631  N/A  Click
4 657409..658626  macrolide-efflux protein mosaic variant 1; SSUJS14_0632  N/A  Click
5 658746..660209  PHAGE_Parame_bursaria_Chlorella_virus_AR158: hypothetical protein AR158_C788L; SSUJS14_0633; phage(gi157953978)  4e-14  Click
6 complement(660327..660626)  hypothetical protein; SSUJS14_0634  N/A  Click
7 complement(660613..660981)  hypothetical protein; SSUJS14_0635  N/A  Click
8 complement(660978..662393)  PHAGE_Bacill_SPBc2: IMPB/MUCB/SAMB family protein; SSUJS14_0636; phage(gi9630142)  1e-66  Click
9 complement(662398..662526)  hypothetical protein; SSUJS14_0637  N/A  Click
10 complement(662516..662743)  hypothetical protein; SSUJS14_0638  N/A  Click
11 complement(662746..663435)  PHAGE_Strept_pyogenes_315_2: putative repressor protein; SSUJS14_0639; phage(gi28876261)  2e-38  Click
12 complement(663536..663682)  hypothetical protein; SSUJS14_0640  N/A  Click
13 663711..665534  hypothetical protein; SSUJS14_0641  N/A  Click
14 665868..666437  hypothetical protein; SSUJS14_0642  N/A  Click
15 complement(666476..668431)  PHAGE_Staphy_phi7401PVL: phage encoded DNA polymerase I; SSUJS14_0643; phage(gi448244655)  3e-165  Click
16 complement(668480..668647)  hypothetical protein; SSUJS14_0644  N/A  Click
17 complement(668666..669214)  PHAGE_Staphy_phi7401PVL: hypothetical protein; SSUJS14_0645; phage(gi448244654)  1e-42  Click
18 complement(669219..670340)  PHAGE_Entero_phiFL4A: hypothetical protein; SSUJS14_0646; phage(gi281416449)  3e-77  Click
19 complement(670333..670656)  hypothetical protein; SSUJS14_0647  N/A  Click
20 complement(670631..670765)  hypothetical phage protein; SSUJS14_0648  N/A  Click
21 671055..673340  PHAGE_Lactob_A2: putative primase; SSUJS14_0649; phage(gi22296557)  5e-55  Click
22 673625..673906  PHAGE_Staphy_2638A: ORF037; SSUJS14_0650; phage(gi66395482)  1e-13  Click
23 673887..675263  PHAGE_Entero_phiFL4A: DNA helicase; SSUJS14_0651; phage(gi281416462)  8e-129  Click
24 677699..677710  attR    TTGCTCAATTTT  N/A  Click
Region 2, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 677193..677558  PHAGE_Bacill_phi105: hypothetical protein phi105_50; SSUJS14_0655; phage(gi22855043)  3e-27  Click
2 677857..678318  hypothetical protein; SSUJS14_0656  N/A  Click
3 678290..679543  PHAGE_Strept_EJ_1: transferase; SSUJS14_0657; phage(gi39653711)  1e-68  Click
4 679543..680133  PHAGE_Xantho_Xop411: p42.1; SSUJS14_0658; phage(gi148727219)  2e-18  Click
5 680130..681404  PHAGE_Clostr_phiMMP02: DNA-cytosine methyltransferase; SSUJS14_0659; phage(gi414090431)  2e-93  Click
6 681483..681731  hypothetical protein; SSUJS14_0660  N/A  Click
7 681733..681945  hypothetical protein; SSUJS14_0661  N/A  Click
8 681947..682177  hypothetical protein; SSUJS14_0662  N/A  Click
9 682229..682702  PHAGE_Burkho_phi1026b: gp1; SSUJS14_0663; phage(gi38707891)  9e-16  Click
10 682699..684291  PHAGE_Nocard_NBR1: terminase large subunit; SSUJS14_0664; phage(gi372217589)  9e-87  Click
11 684351..684653  hypothetical protein; SSUJS14_0665  N/A  Click
12 684653..684991  plasmid stabilization system protein, RelE/ParE family; SSUJS14_0666  N/A  Click
13 685128..685472  PHAGE_Prochl_P_HM1: hypothetical protein; SSUJS14_0667; phage(gi326782083)  2e-06  Click
14 685530..686813  PHAGE_Burkho_phi644_2: gp4, phage portal protein, HK97 family; SSUJS14_0668; phage(gi134288632)  7e-72  Click
15 686806..687501  PHAGE_Geobac_virus_E2: putative Clp peptidase; SSUJS14_0669; phage(gi148747731)  4e-45  Click
16 687520..688725  PHAGE_Burkho_KS9: major capsid protein gp5; SSUJS14_0670; phage(gi255033737)  8e-37  Click
17 688725..688985  hypothetical protein; SSUJS14_0671  N/A  Click
18 688985..689323  PHAGE_Geobac_virus_E2: putative head-tail adaptor; SSUJS14_0672; phage(gi148747735)  8e-05  Click
19 689316..689684  PHAGE_Strept_PH10: hypothetical protein PH10_gp40; SSUJS14_0673; phage(gi238821357)  2e-20  Click
20 689691..690017  PHAGE_Strept_PH10: hypothetical protein PH10_gp41; SSUJS14_0674; phage(gi238821358)  6e-15  Click
21 690019..690588  PHAGE_Strept_PH10: hypothetical protein PH10_gp42; SSUJS14_0675; phage(gi238821359)  2e-52  Click
22 690599..691018  PHAGE_Strept_PH10: hypothetical protein PH10_gp43; SSUJS14_0676; phage(gi238821360)  6e-46  Click
23 691051..691182  hypothetical phage protein; SSUJS14_0677  N/A  Click
24 694064..694786  PHAGE_Strept_PH10: hypothetical protein PH10_gp45; SSUJS14_0680; phage(gi238821362)  2e-82  Click
Region 3, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 694788..699335  PHAGE_Strept_SMP: minor structural protein; SSUJS14_0681; phage(gi119953748)  2e-55  Click
2 699348..699554  PHAGE_Strept_SMP: hypothetical protein; SSUJS14_0682; phage(gi119953749)  3e-11  Click
3 699560..699928  PHAGE_Strept_SMP: hypothetical protein; SSUJS14_0683; phage(gi119953750)  9e-36  Click
4 699906..700301  PHAGE_Clostr_phiCTP1: predicted holin; SSUJS14_0684; phage(gi304360690)  2e-20  Click
5 700308..701777  PHAGE_Strept_pyogenes_315_5: putative cell wall hydrolase, lysin; SSUJS14_0685; phage(gi28876388)  8e-24  Click
6 702000..703241  PHAGE_Bacill_WBeta: putative site-specific recombinase; SSUJS14_0686; phage(gi85701406)  5e-37  Click
7 703204..704496  PHAGE_Bacill_WBeta: putative site-specific recombinase; SSUJS14_0687; phage(gi85701406)  4e-31  Click