Definition Lactobacillus johnsonii DPC 6026, complete genome.
Accession CP002464
Length 1,966,342
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 832789..833745  PHAGE_Bacill_phiAGATE: putative thymidylate synthase; LJP_0758; phage(gi448260873)  1e-77  Click
2 833763..834266  PHAGE_Vibrio_PWH3a_P1: dihydrofolate reductase; LJP_0759; phage(gi472342455)  4e-15  Click
3 834443..835786  major facilitator superfamily permease; LJP_0760  N/A  Click
4 complement(835860..838127)  PHAGE_Parame_AR158: hypothetical protein AR158_C785L; LJP_0761c; phage(gi157953975)  6e-42  Click
5 838251..839099  PHAGE_Burkho_phi1026b: gp58; LJP_0762; phage(gi38707948)  6e-05  Click
6 839381..839468  tRNA  N/A  Click
7 839456..839469  attL    CCTGTACTCTCCTT  N/A  Click
8 complement(839579..840754)  PHAGE_Lactob_Lj965: putative integrase; LJP_0763c; phage(gi41179218)  0.0  Click
9 complement(841053..841943)  PHAGE_Staphy_PT1028: ORF005; LJP_0765c; phage(gi66395169)  3e-35  Click
10 complement(842248..842466)  PHAGE_Lactob_LF1: Zn finger protein; LJP_0766c; phage(gi418489415)  3e-17  Click
11 complement(842511..843059)  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1464; LJP_0767c; phage(gi41179289)  1e-26  Click
12 complement(843131..844312)  hypothetical protein; LJP_0768c  N/A  Click
13 complement(844754..845176)  PHAGE_Lactob_Lj965: putative repressor; LJP_0769c; phage(gi41179223)  6e-81  Click
14 complement(845180..845524)  PHAGE_Lactob_Lj965: putative repressor; LJP_0770c; phage(gi41179224)  2e-26  Click
15 845663..845863  PHAGE_Lister_A118: putative repressor protein; LJP_0771; phage(gi16798820)  5e-11  Click
16 845902..846651  PHAGE_Lactob_Lj965: putative antirepressor; LJP_0772; phage(gi41179226)  2e-142  Click
17 846726..846941  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0296; LJP_0773; phage(gi41179227)  1e-24  Click
18 847066..847275  PHAGE_Lactob_Lj965: hypothetical protein Ljo_1452b; LJP_0774; phage(gi41179256)  3e-34  Click
19 847272..847421  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0296b; LJP_0775; phage(gi41179228)  2e-16  Click
20 847436..847558  hypothetical protein; LJP_0777  N/A  Click
21 847580..847732  PHAGE_Lactob_KC5a: putative recombination protein; LJP_0778; phage(gi90592583)  2e-14  Click
22 847777..848142  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0297; LJP_0779; phage(gi41179229)  5e-65  Click
23 848154..849050  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0298; LJP_0780; phage(gi41179230)  1e-152  Click
24 849053..849889  PHAGE_Lactob_Lj965: putative replication protein; LJP_0781; phage(gi41179231)  2e-149  Click
25 849899..850633  PHAGE_Lactob_Lj965: putative replication protein; LJP_0782; phage(gi41179232)  3e-134  Click
26 850650..850970  PHAGE_Lactob_KC5a: putative transcriptional regulator; LJP_0783; phage(gi90592588)  2e-26  Click
27 850971..851123  hypothetical protein; LJP_0784  N/A  Click
28 851134..851349  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1447; LJP_0785; phage(gi41179306)  1e-32  Click
29 851514..851747  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1446; LJP_0786; phage(gi41179307)  4e-35  Click
30 851749..852324  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1445; LJP_0787; phage(gi41179308)  7e-101  Click
31 852745..852960  hypothetical protein; LJP_0788  N/A  Click
32 853238..853441  PHAGE_Lactob_KC5a: putative holiday junction resolvase; LJP_0789; phage(gi90592597)  7e-24  Click
33 853446..853787  PHAGE_Lactob_Lj771: hypothetical protein LJ771_019; LJP_0790; phage(gi163932171)  2e-44  Click
34 853800..854048  PHAGE_Lactob_Lj771: hypothetical protein LJ771_021; LJP_0791; phage(gi163932173)  3e-26  Click
35 854051..854269  hypothetical protein; LJP_0792  N/A  Click
36 854269..854457  hypothetical protein; LJP_0793  N/A  Click
37 854454..854924  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1443; LJP_0794; phage(gi41179310)  1e-78  Click
38 855614..855686  tRNA  N/A  Click
39 855998..856606  PHAGE_Lactob_KC5a: hypothetical protein; LJP_0795; phage(gi90592606)  5e-81  Click
40 856648..857280  PHAGE_Strept_phiNJ2: hypothetical protein; LJP_0796; phage(gi414090230)  8e-38  Click
41 857889..858734  PHAGE_Lactob_Lj965: putative terminase small subunit; LJP_0797; phage(gi41179239)  1e-136  Click
42 858721..859995  PHAGE_Lactob_Lj965: putative terminase large subunit; LJP_0798; phage(gi41179257)  0.0  Click
43 860011..861510  PHAGE_Lactob_Lj965: putative portal protein; LJP_0799; phage(gi41179240)  0.0  Click
44 861440..861727  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0310; LJP_0800; phage(gi41179241)  2e-34  Click
45 861734..862837  PHAGE_Lactob_Lj965: putative minor head protein; LJP_0801; phage(gi41179242)  2e-158  Click
46 863206..863856  PHAGE_Lactob_Lj965: putative scaffold protein; LJP_0802; phage(gi41179243)  2e-83  Click
47 863859..864227  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0313; LJP_0803; phage(gi41179244)  8e-63  Click
48 864245..865294  PHAGE_Lactob_Lj965: putative major head protein; LJP_0804; phage(gi41179245)  0.0  Click
49 865313..865621  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0315; LJP_0805; phage(gi41179246)  4e-49  Click
50 865618..865971  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0316; LJP_0806; phage(gi41179247)  1e-61  Click
51 865964..866512  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0317; LJP_0807; phage(gi41179258)  1e-98  Click
52 866513..866881  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0318; LJP_0808; phage(gi41179248)  3e-61  Click
53 866885..867376  PHAGE_Lactob_Lj965: putative major tail protein; LJP_0809; phage(gi41179249)  2e-75  Click
54 867449..867859  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0320; LJP_0810; phage(gi41179250)  5e-70  Click
55 867952..868245  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0321; LJP_0811; phage(gi41179259)  4e-50  Click
56 868245..874313  PHAGE_Lactob_Lj965: putative putative minor tail protein; LJP_0812; phage(gi41179260)  0.0  Click
57 874382..874687  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0323; LJP_0813; phage(gi41179261)  2e-52  Click
58 874701..880040  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0324; LJP_0814; phage(gi41179262)  0.0  Click
59 880175..880435  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0325; LJP_0815; phage(gi41179251)  2e-40  Click
60 880576..880833  PHAGE_Lactob_1: holin; LJP_0816; phage(gi219563212)  6e-07  Click
61 880847..881065  PHAGE_Lactob_AQ113: hypothetical protein; LJP_0817; phage(gi446730257)  2e-05  Click
62 881062..881406  PHAGE_Lactob_phiadh: holin; LJP_0818; phage(gi9633061)  1e-48  Click
63 881410..882345  PHAGE_Lactob_Lj965: putative lysin; LJP_0819; phage(gi41179263)  3e-149  Click
64 882771..882989  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0330; LJP_0820; phage(gi41179255)  6e-36  Click
65 883164..883177  attR    CCTGTACTCTCCTT  N/A  Click
66 883364..883948  membrane-associated phospholipid phosphatase; LJP_0821  N/A  Click
67 884126..885412  phosphopyruvate hydratase; LJP_0822  N/A  Click
68 885874..887496  PHAGE_Parame_AR158: hypothetical protein AR158_C788L; LJP_0823; phage(gi157953978)  4e-17  Click
Region 2, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1135624..1137018)  PROPHAGE_Escher_Sakai: ATP-dependent protease ATP-binding subunit HslU; LJP_1051c; phage(gi15834112)  2e-116  Click
2 complement(1137029..1137553)  PROPHAGE_Escher_Sakai: ATP-dependent protease peptidase subunit; LJP_1052c; phage(gi15834113)  2e-40  Click
3 1137245..1137257  attL    TTTATCATTAAAA  N/A  Click
4 complement(1137558..1138481)  PHAGE_Staphy_PT1028: ORF002; LJP_1053c; phage(gi66395166)  7e-13  Click
5 complement(1138484..1139800)  glucose inhibited division protein A; LJP_1054c  N/A  Click
6 complement(1139898..1141979)  PHAGE_Acanth_mimivirus: DNA topoisomerase 1; LJP_1055c; phage(gi311977597)  2e-103  Click
7 complement(1142045..1142890)  SMF protein; LJP_1056c  N/A  Click
8 complement(1142945..1143697)  PHAGE_Cafete_BV_PW1: putative ribonuclease HII; LJP_1057c; phage(gi310831397)  1e-27  Click
9 complement(1143694..1144533)  hypothetical protein; LJP_1058c  N/A  Click
10 complement(1144536..1145987)  PHAGE_Vibrio_ICP1: putative Gp5 baseplate hub subunit and tail lysozyme; LJP_1059c; phage(gi325171175)  2e-07  Click
11 1155242..1155254  attR    TTTATCATTAAAA  N/A  Click