Definition Neisseria meningitidis M04-240196, complete genome.
Accession CP002423
Length 2,250,449
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 34 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1156952..1157161)  PHAGE_Haemop_SuMu: hypothetical protein; NMBM04240196_1039; phage(gi418489077)  2e-08  Click
2 complement(1157158..1157454)  PHAGE_Aggreg_S1249: hypothetical protein; NMBM04240196_1040; phage(gi273809543)  2e-24  Click
3 complement(1157433..1158038)  PHAGE_Haemop_SuMu: putative tail fiber assembly protein; NMBM04240196_1041; phage(gi418489074)  2e-09  Click
4 1158118..1158405  PHAGE_Burkho_phiE202: gp6, pANL56; NMBM04240196_1042; phage(gi134288760)  5e-07  Click
5 1158377..1158679  PHAGE_Burkho_phiE202: gp7, pANL12; NMBM04240196_1043; phage(gi134288781)  3e-05  Click
6 complement(1159730..1161703)  PHAGE_Haemop_HP2: tail fibers; NMBM04240196_1044; phage(gi17981847)  1e-137  Click
7 complement(1161714..1162274)  PHAGE_Haemop_SuMu: hypothetical protein; NMBM04240196_1045; phage(gi418489072)  8e-38  Click
8 complement(1163339..1163686)  PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; NMBM04240196_1047; phage(gi418489070)  2e-32  Click
9 complement(1163787..1164455)  PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; NMBM04240196_1048; phage(gi418489069)  1e-67  Click
10 complement(1164452..1165597)  PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; NMBM04240196_1049; phage(gi418489068)  9e-120  Click
11 complement(1165587..1166918)  PHAGE_Haemop_SuMu: DNA circulation protein; NMBM04240196_1050; phage(gi418489067)  8e-67  Click
12 complement(1166918..1169056)  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; NMBM04240196_1051; phage(gi418489066)  4e-53  Click
13 1169211..1169813  putative lipoprotein; NMBM04240196_1052  N/A  Click
14 complement(1169857..1169976)  hypothetical protein; NMBM04240196_1053  N/A  Click
15 complement(1170065..1170430)  PHAGE_Haemop_SuMu: hypothetical protein; NMBM04240196_1054; phage(gi418489064)  7e-13  Click
16 complement(1170434..1170811)  PHAGE_Haemop_SuMu: tail tube protein; NMBM04240196_1055; phage(gi418489063)  3e-29  Click
17 complement(1170876..1172288)  PHAGE_Haemop_SuMu: tail sheath protein gpL; NMBM04240196_1056; phage(gi418489090)  9e-133  Click
18 complement(1172288..1172485)  PHAGE_Haemop_SuMu: hypothetical protein; NMBM04240196_1057; phage(gi418489089)  3e-10  Click
19 complement(1172482..1173132)  PHAGE_Haemop_SuMu: Mu-like prophage protein gp37; NMBM04240196_1058; phage(gi418489088)  2e-33  Click
20 complement(1173122..1173544)  PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; NMBM04240196_1059; phage(gi418489087)  4e-29  Click
21 complement(1173544..1173978)  conserved domain protein; NMBM04240196_1060  N/A  Click
22 1174054..1175019  PROPHAGE_Neisse_MC58: IS30 family transposase; NMBM04240196_1061; phage(gi15677611)  0.0  Click
23 complement(1175107..1176234)  PHAGE_Haemop_SuMu: bacteriophage Mu I protein gp32; NMBM04240196_1062; phage(gi418489085)  7e-61  Click
24 complement(1176399..1176815)  PHAGE_Haemop_SuMu: Mu-like prophage protein gpG; NMBM04240196_1063; phage(gi418489082)  7e-33  Click
25 complement(1176925..1178220)  PHAGE_Haemop_SuMu: MuF; NMBM04240196_1064; phage(gi418489084)  2e-115  Click
26 complement(1178207..1179775)  PHAGE_Haemop_SuMu: portal protein gp29; NMBM04240196_1065; phage(gi418489080)  0.0  Click
27 complement(1179775..1181397)  PHAGE_Haemop_SuMu: terminase; NMBM04240196_1066; phage(gi418489081)  0.0  Click
28 1181410..1182000  hypothetical protein; NMBM04240196_1067  N/A  Click
29 complement(1181997..1182503)  PHAGE_Pseudo_MP42: hypothetical protein; NMBM04240196_1068; phage(gi399528604)  3e-43  Click
30 complement(1182506..1182703)  conserved hypothetical protein; NMBM04240196_1069  N/A  Click
31 complement(1182700..1182966)  conserved hypothetical protein; NMBM04240196_1070  N/A  Click
32 complement(1182978..1183316)  hypothetical protein; NMBM04240196_1071  N/A  Click
33 complement(1183313..1183531)  hypothetical protein; NMBM04240196_1072  N/A  Click
34 1183544..1183714  PHAGE_Mycoba_Troll4: gp41; NMBM04240196_1073; phage(gi206599836)  9e-05  Click
Region 2, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1285210..1286976  PHAGE_Synech_PM2: virion structural protein; NMBM04240196_1171; phage(gi58532987)  9e-08  Click
2 1287109..1288116  PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; NMBM04240196_1172; phage(gi16129935)  1e-22  Click
3 complement(1288158..1288553)  hypothetical protein; NMBM04240196_1173  N/A  Click
4 complement(1288773..1288937)  conserved hypothetical protein; NMBM04240196_1174  N/A  Click
5 complement(1288940..1289143)  hypothetical protein; NMBM04240196_1175  N/A  Click
6 complement(1289140..1289685)  PHAGE_Acinet_Acj9: putative N-acetylmuramoyl-L-alanine amidase; NMBM04240196_1176; phage(gi311993288)  1e-36  Click
7 complement(1289993..1290430)  PHAGE_Pseudo_MP42: putative integral membrane protein; NMBM04240196_1177; phage(gi399528599)  2e-16  Click
8 complement(1290402..1290836)  PHAGE_Pseudo_MP42: hypothetical protein; NMBM04240196_1178; phage(gi399528598)  6e-22  Click
9 complement(1292191..1292403)  conserved domain protein; NMBM04240196_1179  N/A  Click
10 complement(1292431..1292559)  hypothetical protein; NMBM04240196_1180  N/A  Click
11 complement(1292559..1294139)  PHAGE_Prochl_P_SSM2: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase; NMBM04240196_1181; phage(gi61806062)  8e-67  Click
Region 3, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1356976..1356987  attL    AAAAATGCGGAA  N/A  Click
2 1362291..1362659  PHAGE_Entero_P1: Doc; NMBM04240196_1243; phage(gi46401725)  7e-16  Click
3 1363097..1363588  conserved hypothetical protein; NMBM04240196_1244  N/A  Click
4 1363947..1364183  putative plasmid toxin protein PemI; NMBM04240196_1245  N/A  Click
5 1364185..1364532  PHAGE_Strept_1: transcriptional regulator; NMBM04240196_1246; phage(gi39653708)  4e-08  Click
6 complement(1364585..1365094)  conserved domain protein; NMBM04240196_1247  N/A  Click
7 complement(1365106..1365279)  conserved domain protein; NMBM04240196_1248  N/A  Click
8 1365355..1366320  PHAGE_Spirop_R8A2B: putative transposase; NMBM04240196_1249; phage(gi9626114)  4e-24  Click
9 1366743..1367453  PHAGE_Entero_HK225: prophage repressor; NMBM04240196_1250; phage(gi428782422)  5e-37  Click
10 1367556..1367981  hypothetical protein; NMBM04240196_1251  N/A  Click
11 1368225..1368425  conserved domain protein; NMBM04240196_1252  N/A  Click
12 1368493..1368852  PHAGE_Burkho_BcepMigl: hypothetical protein; NMBM04240196_1253; phage(gi431809867)  1e-07  Click
13 1368877..1369731  PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp11; NMBM04240196_1254; phage(gi238801627)  4e-16  Click
14 1369801..1370016  hypothetical protein; NMBM04240196_1255  N/A  Click
15 1370051..1370311  putative lipoprotein; NMBM04240196_1256  N/A  Click
16 1370308..1370601  hypothetical protein; NMBM04240196_1257  N/A  Click
17 1370604..1370795  hypothetical protein; NMBM04240196_1258  N/A  Click
18 1370857..1371141  hypothetical protein; NMBM04240196_1259  N/A  Click
19 complement(1371199..1372116)  PHAGE_Salmon_SPN3UB: KilA-N domain protein; NMBM04240196_1260; phage(gi423262448)  2e-20  Click
20 complement(1372984..1373463)  conserved hypothetical protein; NMBM04240196_1261  N/A  Click
21 1373577..1373762  hypothetical protein; NMBM04240196_1262  N/A  Click
22 1374372..1374383  attR    AAAAATGCGGAA  N/A  Click
23 complement(1374392..1375489)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NMBM04240196_1264; phage(gi16130540)  2e-44  Click