Definition Neisseria meningitidis H44/76, complete genome.
Accession CP002420
Length 2,240,883
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1165579..1165788)  PHAGE_Haemop_SuMu: hypothetical protein; NMBH4476_1048; phage(gi418489077)  2e-08  Click
2 complement(1165785..1166081)  PHAGE_Aggreg_S1249: hypothetical protein; NMBH4476_1049; phage(gi273809543)  3e-25  Click
3 complement(1166060..1166665)  PHAGE_Haemop_SuMu: putative tail fiber assembly protein; NMBH4476_1050; phage(gi418489074)  5e-10  Click
4 1166745..1167032  PHAGE_Burkho_phiE202: gp6, pANL56; NMBH4476_1051; phage(gi134288760)  5e-08  Click
5 1167004..1167306  PHAGE_Burkho_phiE202: gp7, pANL12; NMBH4476_1052; phage(gi134288781)  2e-05  Click
6 complement(1168370..1170343)  PHAGE_Haemop_HP2: tail fibers; NMBH4476_1053; phage(gi17981847)  1e-137  Click
7 complement(1170354..1170914)  PHAGE_Haemop_SuMu: hypothetical protein; NMBH4476_1054; phage(gi418489072)  8e-38  Click
8 complement(1171979..1172326)  PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; NMBH4476_1056; phage(gi418489070)  2e-31  Click
9 complement(1172427..1173095)  PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; NMBH4476_1057; phage(gi418489069)  1e-67  Click
10 complement(1173092..1174237)  PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; NMBH4476_1058; phage(gi418489068)  3e-118  Click
11 complement(1174227..1175558)  PHAGE_Haemop_SuMu: DNA circulation protein; NMBH4476_1059; phage(gi418489067)  2e-67  Click
12 complement(1175558..1177585)  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; NMBH4476_1060; phage(gi418489066)  1e-51  Click
13 1177884..1178486  putative lipoprotein; NMBH4476_1061  N/A  Click
14 complement(1178530..1178658)  hypothetical protein; NMBH4476_1062  N/A  Click
15 complement(1178738..1179103)  PHAGE_Haemop_SuMu: hypothetical protein; NMBH4476_1063; phage(gi418489064)  7e-13  Click
16 complement(1179107..1179484)  PHAGE_Haemop_SuMu: tail tube protein; NMBH4476_1064; phage(gi418489063)  3e-29  Click
17 complement(1179549..1180958)  PHAGE_Haemop_SuMu: tail sheath protein gpL; NMBH4476_1065; phage(gi418489090)  2e-133  Click
18 complement(1180961..1181158)  PHAGE_Haemop_SuMu: hypothetical protein; NMBH4476_1066; phage(gi418489089)  3e-10  Click
19 complement(1181155..1181748)  PHAGE_Haemop_SuMu: Mu-like prophage protein gp37; NMBH4476_1067; phage(gi418489088)  1e-26  Click
20 complement(1181795..1182217)  PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; NMBH4476_1068; phage(gi418489087)  4e-29  Click
21 complement(1182217..1182651)  conserved domain protein; NMBH4476_1069  N/A  Click
22 1182727..1183692  PROPHAGE_Neisse_MC58: IS30 family transposase; NMBH4476_1070; phage(gi15677611)  0.0  Click
23 complement(1183780..1184889)  PHAGE_Haemop_SuMu: bacteriophage Mu I protein gp32; NMBH4476_1071; phage(gi418489085)  7e-61  Click
24 complement(1185597..1186892)  PHAGE_Haemop_SuMu: MuF; NMBH4476_1073; phage(gi418489084)  3e-116  Click
25 complement(1186879..1188447)  PHAGE_Haemop_SuMu: portal protein gp29; NMBH4476_1074; phage(gi418489080)  0.0  Click
Region 2, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1292481..1294256  PHAGE_Synech_PM2: virion structural protein; NMBH4476_1180; phage(gi58532987)  3e-07  Click
2 1294390..1295502  PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; NMBH4476_1181; phage(gi16131377)  2e-20  Click
3 complement(1295544..1295948)  hypothetical protein; NMBH4476_1182  N/A  Click
4 complement(1295920..1296156)  conserved hypothetical protein; NMBH4476_1183  N/A  Click
5 complement(1296159..1296323)  conserved hypothetical protein; NMBH4476_1184  N/A  Click
6 complement(1296326..1296529)  hypothetical protein; NMBH4476_1185  N/A  Click
7 complement(1296526..1297071)  PHAGE_Acinet_Acj9: putative N-acetylmuramoyl-L-alanine amidase; NMBH4476_1186; phage(gi311993288)  2e-37  Click
8 complement(1297379..1297810)  PHAGE_Pseudo_MP42: putative integral membrane protein; NMBH4476_1187; phage(gi399528599)  2e-16  Click
9 complement(1297788..1298336)  PHAGE_Pseudo_MP42: hypothetical protein; NMBH4476_1188; phage(gi399528598)  8e-22  Click
10 complement(1298347..1298778)  PROPHAGE_Escher_CFT073: transposase; NMBH4476_1189; phage(gi26248352)  2e-07  Click
11 complement(1299535..1299759)  hypothetical protein; NMBH4476_1190  N/A  Click
12 complement(1299775..1299903)  hypothetical protein; NMBH4476_1191  N/A  Click
13 complement(1299903..1301483)  PHAGE_Prochl_P_SSM2: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase; NMBH4476_1192; phage(gi61806062)  8e-67  Click
Region 3, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1364942..1364953  attL    AAAAATGCGGAA  N/A  Click
2 1370189..1370557  PHAGE_Entero_P1: Doc; NMBH4476_1254; phage(gi46401725)  7e-16  Click
3 1370995..1371486  conserved hypothetical protein; NMBH4476_1255  N/A  Click
4 1371845..1372081  putative plasmid toxin protein PemI; NMBH4476_1256  N/A  Click
5 1372083..1372430  PHAGE_Strept_1: transcriptional regulator; NMBH4476_1257; phage(gi39653708)  4e-08  Click
6 complement(1372483..1372992)  conserved domain protein; NMBH4476_1258  N/A  Click
7 complement(1373004..1373177)  conserved domain protein; NMBH4476_1259  N/A  Click
8 1373253..1374218  PHAGE_Spirop_R8A2B: putative transposase; NMBH4476_1260; phage(gi9626114)  7e-24  Click
9 1374641..1375351  PHAGE_Entero_HK225: prophage repressor; NMBH4476_1261; phage(gi428782422)  5e-37  Click
10 1375454..1375879  hypothetical protein; NMBH4476_1262  N/A  Click
11 1376123..1376323  conserved domain protein; NMBH4476_1263  N/A  Click
12 1376391..1376750  PHAGE_Burkho_BcepMigl: hypothetical protein; NMBH4476_1264; phage(gi431809867)  1e-07  Click
13 1376775..1377629  PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp11; NMBH4476_1265; phage(gi238801627)  2e-17  Click
14 1377699..1377914  hypothetical protein; NMBH4476_1266  N/A  Click
15 1377949..1378209  putative lipoprotein; NMBH4476_1267  N/A  Click
16 1378260..1378499  hypothetical protein; NMBH4476_1268  N/A  Click
17 1378502..1378693  hypothetical protein; NMBH4476_1269  N/A  Click
18 1378693..1378833  conserved hypothetical protein; NMBH4476_1270  N/A  Click
19 1378830..1379039  hypothetical protein; NMBH4476_1271  N/A  Click
20 complement(1379097..1380014)  PHAGE_Salmon_SPN3UB: KilA-N domain protein; NMBH4476_1272; phage(gi423262448)  2e-20  Click
21 complement(1380883..1381239)  conserved hypothetical protein; NMBH4476_1273  N/A  Click
22 1381465..1381650  hypothetical protein; NMBH4476_1274  N/A  Click
23 complement(1381787..1382128)  conserved hypothetical protein; NMBH4476_1275  N/A  Click
24 1382260..1382271  attR    AAAAATGCGGAA  N/A  Click
25 complement(1382280..1383212)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NMBH4476_1276; phage(gi16130540)  4e-35  Click