| Definition | Lactococcus lactis subsp. lactis CV56, complete genome. |
|---|---|
| Accession | CP002365 |
| Length | 2,399,458 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 28450..28467 | attL AGCTCAGTTGGTAGAGCA | N/A | Click |
| 2 | 33470..34627 | PHAGE_Microm_MpV1: hypothetical protein; CVCAS_0026; phage(gi313768442) | 9e-16 | Click |
| 3 | complement(36265..36708) | PHAGE_Lactoc_bIL310: terminase; CVCAS_0027; phage(gi13095888) | 1e-78 | Click |
| 4 | complement(36841..37422) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p26; CVCAS_0028; phage(gi13095887) | 5e-103 | Click |
| 5 | complement(37658..39286) | PHAGE_Lactoc_bIL310: helicase; CVCAS_0029; phage(gi13095886) | 0.0 | Click |
| 6 | complement(39297..40091) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; CVCAS_0030; phage(gi13095885) | 5e-157 | Click |
| 7 | complement(40095..40424) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p23; CVCAS_0031; phage(gi13095884) | 7e-58 | Click |
| 8 | complement(40411..40605) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p22; CVCAS_0032; phage(gi13095883) | 1e-30 | Click |
| 9 | complement(40853..41092) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p20; CVCAS_0033; phage(gi13095881) | 2e-40 | Click |
| 10 | complement(41661..42182) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p17; CVCAS_0034; phage(gi13095878) | 6e-96 | Click |
| 11 | complement(42186..42380) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p16; CVCAS_0035; phage(gi13095877) | 1e-30 | Click |
| 12 | complement(42456..43196) | PHAGE_Lactoc_bIL310: anti-repressor; CVCAS_0036; phage(gi13095876) | 9e-138 | Click |
| 13 | complement(43225..43401) | PHAGE_Lactoc_bIL310: repressor; CVCAS_0037; phage(gi13095875) | 1e-25 | Click |
| 14 | 43683..44069 | PHAGE_Lactoc_bIL310: immunity repressor; CVCAS_0038; phage(gi13095874) | 2e-68 | Click |
| 15 | 44079..44633 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p12; CVCAS_0039; phage(gi13095873) | 5e-112 | Click |
| 16 | 45047..45241 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p09; CVCAS_0040; phage(gi13095870) | 4e-31 | Click |
| 17 | 45474..45635 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p08; CVCAS_0041; phage(gi13095869) | 4e-22 | Click |
| 18 | 45771..45995 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p07; CVCAS_0042; phage(gi13095868) | 2e-37 | Click |
| 19 | 46462..46788 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p06; CVCAS_0043; phage(gi19343482) | 4e-24 | Click |
| 20 | 47696..47860 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p03; CVCAS_0044; phage(gi13095865) | 7e-24 | Click |
| 21 | 47982..48287 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p02; CVCAS_0045; phage(gi13095864) | 2e-51 | Click |
| 22 | 48537..49721 | PHAGE_Lactoc_bIL310: integrase; CVCAS_0046; phage(gi13095863) | 0.0 | Click |
| 23 | 53626..53643 | attR AGCTCAGTTGGTAGAGCA | N/A | Click |
Region 2, total : 62 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1013597..1014283 | PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; CVCAS_0968; phage(gi197322490) | 1e-06 | Click |
| 2 | 1014303..1014818 | conserved hypothetical protein; CVCAS_0970 | N/A | Click |
| 3 | 1014822..1016147 | PHAGE_Ectoca_1: EsV-1-65; CVCAS_0971; phage(gi13242537) | 7e-12 | Click |
| 4 | 1016154..1016810 | PAP2 family membrane-associated phospholipid phosphatase; CVCAS_0972 | N/A | Click |
| 5 | 1016991..1018808 | PHAGE_Parame_NY2A: hypothetical protein NY2A_B143R; CVCAS_0973; phage(gi157952447) | 4e-96 | Click |
| 6 | 1018939..1019619 | DNA repair protein RadC; CVCAS_0974 | N/A | Click |
| 7 | 1019690..1019701 | attL TTTTATTTTGTA | N/A | Click |
| 8 | complement(1019818..1020942) | PHAGE_Lactoc_r1t: Integrase; CVCAS_0975; phage(gi23455720) | 0.0 | Click |
| 9 | complement(1021068..1021559) | PHAGE_Lactoc_r1t: hypothetical protein r1tp02; CVCAS_0976; phage(gi23455721) | 9e-19 | Click |
| 10 | complement(1021620..1022057) | PHAGE_Lactoc_1: ORF3; CVCAS_0977; phage(gi13786534) | 4e-82 | Click |
| 11 | complement(1022054..1022431) | PHAGE_Lactoc_lato: putative repressor protein; CVCAS_0978; phage(gi30089862) | 1e-10 | Click |
| 12 | 1022744..1022977 | PHAGE_Lactoc_bIL286: repressor; CVCAS_0979; phage(gi13095748) | 3e-38 | Click |
| 13 | 1022991..1023716 | PHAGE_Lactoc_lato: putative antirepressor; CVCAS_0980; phage(gi30089864) | 2e-117 | Click |
| 14 | 1023729..1024064 | PHAGE_Lactoc_bIL285: Orf7; CVCAS_0981; phage(gi13095687) | 4e-61 | Click |
| 15 | 1024205..1024399 | PHAGE_Staphy_JD007: hypothetical protein; CVCAS_0982; phage(gi428783123) | 1e-05 | Click |
| 16 | 1024409..1024657 | PHAGE_Lactoc_lato: hypothetical protein P335p05; CVCAS_0983; phage(gi30089866) | 2e-06 | Click |
| 17 | 1024654..1024830 | PHAGE_Lactoc_lato: hypothetical protein P335p06; CVCAS_0984; phage(gi30089867) | 6e-25 | Click |
| 18 | 1024933..1025739 | PHAGE_Lactoc_lato: hypothetical protein P335p09; CVCAS_0985; phage(gi30089870) | 1e-154 | Click |
| 19 | 1025733..1026653 | PHAGE_Lactoc_lato: hypothetical protein P335p10; CVCAS_0986; phage(gi30089871) | 4e-171 | Click |
| 20 | 1026879..1027688 | PHAGE_Lactoc_T: putative replication protein; CVCAS_0987; phage(gi14251172) | 1e-127 | Click |
| 21 | 1027669..1027890 | PHAGE_Lactoc_T: hypothetical protein BK5-Tp50; CVCAS_0988; phage(gi14251173) | 9e-37 | Click |
| 22 | 1027880..1028269 | PHAGE_Lactoc_phiLC3: resolvase; CVCAS_0989; phage(gi45597404) | 8e-73 | Click |
| 23 | 1028272..1029087 | PHAGE_Cronob_CR3: putative DNA methylase 2; CVCAS_0990; phage(gi389060120) | 4e-65 | Click |
| 24 | 1029080..1029319 | PHAGE_Lactoc_ul36: hypothetical protein ul36_18; CVCAS_0991; phage(gi21716089) | 2e-40 | Click |
| 25 | 1029430..1029636 | PHAGE_Lactoc_lato: hypothetical protein P335p15; CVCAS_0992; phage(gi30089876) | 4e-33 | Click |
| 26 | 1029645..1029920 | hypothetical protein; CVCAS_0993 | N/A | Click |
| 27 | 1029932..1030321 | hypothetical protein; CVCAS_0994 | N/A | Click |
| 28 | 1030318..1030470 | PHAGE_Lactoc_ul36: hypothetical protein ul36_22; CVCAS_0995; phage(gi21716093) | 7e-24 | Click |
| 29 | 1030463..1031137 | PHAGE_Lactoc_lato: hypothetical protein P335p18; CVCAS_0996; phage(gi30089879) | 2e-78 | Click |
| 30 | 1031134..1031553 | PHAGE_Lactoc_phiLC3: dUTPase; CVCAS_0997; phage(gi45597408) | 7e-73 | Click |
| 31 | 1031555..1031887 | hypothetical protein; CVCAS_0998 | N/A | Click |
| 32 | 1032480..1032641 | PHAGE_Lactoc_ul36: hypothetical protein ul36_26; CVCAS_1000; phage(gi21716097) | 9e-27 | Click |
| 33 | 1032634..1032996 | PHAGE_Lactoc_ul36: hypothetical protein ul36_27; CVCAS_1001; phage(gi21716098) | 1e-67 | Click |
| 34 | 1032983..1033663 | PHAGE_Lactoc_lato: hypothetical protein P335p20; CVCAS_1002; phage(gi30089881) | 8e-124 | Click |
| 35 | 1033741..1033983 | conserved hypothetical protein; CVCAS_1003 | N/A | Click |
| 36 | 1034221..1034373 | PHAGE_Lactoc_lato: hypothetical protein P335p24; CVCAS_1004; phage(gi30089885) | 7e-11 | Click |
| 37 | 1034370..1034684 | phage protein; CVCAS_1005 | N/A | Click |
| 38 | 1034818..1035060 | PHAGE_Lactoc_KSY1: gp023; CVCAS_1006; phage(gi157311026) | 3e-26 | Click |
| 39 | 1035139..1035528 | PHAGE_Lactoc_lato: hypothetical protein P335p28; CVCAS_1007; phage(gi30089889) | 2e-12 | Click |
| 40 | 1035700..1036173 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_28; CVCAS_1008; phage(gi13487829) | 3e-75 | Click |
| 41 | 1036154..1037605 | PHAGE_Lister_B054: TerL; CVCAS_1009; phage(gi157325286) | 6e-154 | Click |
| 42 | 1037618..1039147 | PHAGE_Vibrio_SIO_2: capsid portal protein; CVCAS_1010; phage(gi371496385) | 4e-25 | Click |
| 43 | 1039140..1039970 | PHAGE_Natria_PhiCh1: capsid protein gpC; CVCAS_1011; phage(gi22091111) | 8e-08 | Click |
| 44 | 1039986..1041050 | PHAGE_Methan_psiM100: putative structural protein; CVCAS_1012; phage(gi11863104) | 2e-17 | Click |
| 45 | 1041065..1041982 | PHAGE_Natria_PhiCh1: capsid protein gpE; CVCAS_1013; phage(gi22091115) | 5e-08 | Click |
| 46 | 1042011..1042247 | PHAGE_Brocho_NF5: gp6.1; CVCAS_1014; phage(gi327197590) | 1e-17 | Click |
| 47 | 1042321..1042722 | PHAGE_Bacill_PBC1: hypothetical protein; CVCAS_1015; phage(gi389060332) | 3e-12 | Click |
| 48 | 1042712..1043056 | PHAGE_Bacill_PBC1: putative minor capsid protein 1; CVCAS_1016; phage(gi389060333) | 2e-10 | Click |
| 49 | 1043053..1043382 | PHAGE_Bacill_PBC1: putative minor capsid protein 2; CVCAS_1017; phage(gi389060334) | 2e-12 | Click |
| 50 | 1043382..1043816 | conserved hypothetical protein; CVCAS_1018 | N/A | Click |
| 51 | 1043827..1044303 | PHAGE_Bacill_PBC1: major capsid protein gpP; CVCAS_1019; phage(gi389060336) | 6e-22 | Click |
| 52 | 1044360..1044767 | conserved hypothetical protein; CVCAS_1020 | N/A | Click |
| 53 | 1044783..1045490 | PHAGE_Lactob_phig1e: hypothetical protein phig1ep25; CVCAS_1021; phage(gi23455810) | 5e-17 | Click |
| 54 | 1045480..1047693 | PHAGE_Strept_3: putative human platelet-binding protein; CVCAS_1022; phage(gi28876274) | 3e-95 | Click |
| 55 | 1047703..1049232 | PHAGE_Lactoc_lato: putative tail protein; CVCAS_1023; phage(gi30089905) | 2e-99 | Click |
| 56 | 1049229..1053179 | PHAGE_Lactoc_lato: putative tail-host specificity protein; CVCAS_1024; phage(gi30089906) | 0.0 | Click |
| 57 | 1053191..1053427 | PHAGE_Lactoc_1706: hypothetical protein LaP1706_gp22; CVCAS_1025; phage(gi182637499) | 6e-34 | Click |
| 58 | 1053440..1053790 | PHAGE_Lactoc_lato: hypothetical protein P335p47; CVCAS_1026; phage(gi30089908) | 1e-47 | Click |
| 59 | 1053803..1054102 | PHAGE_Lactoc_bIL286: holin; CVCAS_1027; phage(gi13095803) | 1e-50 | Click |
| 60 | 1054102..1054881 | PHAGE_Lactoc_T: putative lysin; CVCAS_1028; phage(gi14251151) | 4e-147 | Click |
| 61 | complement(1055564..1056214) | redox-sensing transcriptional repressor; CVCAS_1029 | N/A | Click |
| 62 | 1056439..1056831 | arsenate reductase family protein; CVCAS_1030 | N/A | Click |
| 63 | 1057009..1058916 | PHAGE_Parame_FR483: hypothetical protein FR483_N733R; CVCAS_1031; phage(gi155370831) | 3e-24 | Click |
| 64 | 1061035..1061046 | attR TTTTATTTTGTA | N/A | Click |
Region 3, total : 23 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1722092..1722103 | attL CAACTAAGCTAA | N/A | Click |
| 2 | complement(1722462..1722662) | PHAGE_Lactoc_bIL312: Csp; CVCAS_1647; phage(gi13095918) | 1e-30 | Click |
| 3 | complement(1723782..1724192) | conserved hypothetical protein; CVCAS_1648 | N/A | Click |
| 4 | complement(1724219..1724485) | hypothetical protein; CVCAS_1649 | N/A | Click |
| 5 | complement(1724485..1724988) | conserved hypothetical protein; CVCAS_1650 | N/A | Click |
| 6 | complement(1725066..1725245) | PHAGE_Lactoc_bIL311: Orf19; CVCAS_1651; phage(gi13095677) | 1e-25 | Click |
| 7 | complement(1725740..1725937) | PHAGE_Lactoc_bIL311: Orf16; CVCAS_1652; phage(gi13095674) | 1e-13 | Click |
| 8 | complement(1726121..1726483) | PHAGE_Lactoc_bIL311: Orf15; CVCAS_1653; phage(gi13095673) | 3e-63 | Click |
| 9 | complement(1726501..1727073) | PHAGE_Lactoc_bIL311: Orf14; CVCAS_1654; phage(gi13095672) | 2e-97 | Click |
| 10 | complement(1727235..1727441) | PHAGE_Lactoc_bIL311: Orf12; CVCAS_1655; phage(gi13095670) | 5e-33 | Click |
| 11 | complement(1727460..1727642) | PHAGE_Lactoc_bIL311: Orf11; CVCAS_1656; phage(gi13095669) | 5e-29 | Click |
| 12 | complement(1728012..1729709) | PHAGE_Lactoc_bIL311: Orf9; CVCAS_1657; phage(gi13095667) | 0.0 | Click |
| 13 | complement(1729719..1729988) | PHAGE_Lactoc_bIL311: Orf8; CVCAS_1658; phage(gi13095666) | 3e-41 | Click |
| 14 | complement(1729985..1730137) | PHAGE_Lactoc_bIL311: Orf7; CVCAS_1659; phage(gi13095665) | 2e-17 | Click |
| 15 | complement(1730390..1731082) | PHAGE_Lactoc_bIL310: anti-repressor; CVCAS_1660; phage(gi13095876) | 1e-18 | Click |
| 16 | complement(1731085..1731309) | hypothetical protein; CVCAS_1661 | N/A | Click |
| 17 | complement(1731526..1731756) | PHAGE_Brocho_BL3: gp41; CVCAS_1662; phage(gi327409433) | 8e-06 | Click |
| 18 | 1731914..1732591 | PHAGE_Lactoc_lato: hypothetical protein P335p08; CVCAS_1663; phage(gi30089869) | 2e-12 | Click |
| 19 | 1732684..1733895 | PHAGE_Lactoc_bIL311: integrase; CVCAS_1664; phage(gi13095659) | 2e-120 | Click |
| 20 | complement(1734016..1734930) | diacylglycerol kinase family protein; CVCAS_1665 | N/A | Click |
| 21 | complement(1735087..1735599) | 2',3'-cyclic-nucleotide 2'-phosphodiesterase; CVCAS_1666 | N/A | Click |
| 22 | 1735932..1736165 | 30S ribosomal protein S20; CVCAS_1667 | N/A | Click |
| 23 | complement(1736162..1736278) | hypothetical protein; CVCAS_1668 | N/A | Click |
| 24 | complement(1736259..1738763) | PHAGE_Clostr_st: exodeoxyribonuclease V, alpha subunit; CVCAS_1669; phage(gi80159748) | 5e-48 | Click |
| 25 | 1743024..1743035 | attR CAACTAAGCTAA | N/A | Click |
Region 4, total : 61 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1883260..1883271 | attL CTTCATGAATGA | N/A | Click |
| 2 | complement(1897321..1898097) | PHAGE_Cronob_phiES15: putative serine/threonine phosphatase; CVCAS_1827; phage(gi401817585) | 4e-11 | Click |
| 3 | complement(1898178..1899452) | ribosomal RNA small subunit methyltransferase B; CVCAS_1828 | N/A | Click |
| 4 | complement(1900406..1901185) | PHAGE_Lactoc_bIL285: lysin; CVCAS_1829; phage(gi13095742) | 1e-146 | Click |
| 5 | complement(1901185..1901472) | PHAGE_Lactoc_bIL309: holin; CVCAS_1830; phage(gi13095860) | 1e-49 | Click |
| 6 | complement(1901485..1901835) | PHAGE_Lactoc_r1t: hypothetical protein r1tp46; CVCAS_1831; phage(gi23455765) | 1e-54 | Click |
| 7 | complement(1901950..1902111) | PHAGE_Strept_1: hypothetical protein EJ-1p68; CVCAS_1832; phage(gi39653742) | 9e-13 | Click |
| 8 | complement(1902225..1904582) | PHAGE_Lactoc_1: ORF48; CVCAS_1833; phage(gi13786579) | 3e-16 | Click |
| 9 | complement(1904600..1907353) | PHAGE_Lactoc_1: ORF47; CVCAS_1834; phage(gi13786578) | 0.0 | Click |
| 10 | complement(1907353..1908114) | PHAGE_Lactoc_1: ORF46; CVCAS_1835; phage(gi13786577) | 2e-138 | Click |
| 11 | complement(1908124..1910937) | PHAGE_Lactoc_1: TMP; CVCAS_1836; phage(gi13786576) | 0.0 | Click |
| 12 | complement(1910951..1911214) | PHAGE_Lactoc_1: ORF44; CVCAS_1837; phage(gi13786575) | 4e-45 | Click |
| 13 | complement(1911310..1911645) | PHAGE_Lactoc_1: ORF43; CVCAS_1838; phage(gi13786574) | 8e-57 | Click |
| 14 | complement(1911761..1912258) | PHAGE_Lactoc_1: MTP; CVCAS_1839; phage(gi13786573) | 2e-79 | Click |
| 15 | complement(1912269..1912664) | PHAGE_Lactoc_1: ORF41; CVCAS_1840; phage(gi13786572) | 3e-57 | Click |
| 16 | complement(1912661..1912999) | PHAGE_Lactoc_1: ORF40; CVCAS_1841; phage(gi13786571) | 8e-57 | Click |
| 17 | complement(1912996..1913307) | PHAGE_Lactoc_1: ORF39; CVCAS_1842; phage(gi13786570) | 5e-54 | Click |
| 18 | complement(1913304..1913636) | PHAGE_Lactoc_1: ORF38; CVCAS_1843; phage(gi13786569) | 1e-54 | Click |
| 19 | complement(1913623..1913820) | PHAGE_Lactoc_1: ORF37; CVCAS_1844; phage(gi13786568) | 8e-31 | Click |
| 20 | complement(1913820..1914641) | PHAGE_Lactoc_1: MHP; CVCAS_1845; phage(gi13786567) | 4e-144 | Click |
| 21 | complement(1914643..1915305) | PHAGE_Lactoc_1: SFP; CVCAS_1846; phage(gi13786566) | 8e-116 | Click |
| 22 | complement(1915420..1915674) | PHAGE_Lactoc_ul36: hypothetical protein ul36_40; CVCAS_1847; phage(gi21716111) | 5e-30 | Click |
| 23 | complement(1915671..1915898) | PHAGE_Lactoc_1: ORF34; CVCAS_1848; phage(gi13786565) | 6e-36 | Click |
| 24 | complement(1915913..1916623) | PHAGE_Lactoc_1: ORF33; CVCAS_1849; phage(gi13786564) | 4e-123 | Click |
| 25 | complement(1916663..1917607) | PHAGE_Lactoc_1: ORF33; CVCAS_1850; phage(gi13786564) | 2e-172 | Click |
| 26 | complement(1917786..1919174) | PHAGE_Lactoc_1: ORF32; CVCAS_1851; phage(gi13786563) | 0.0 | Click |
| 27 | complement(1919188..1920576) | PHAGE_Lactoc_1: TerL; CVCAS_1852; phage(gi13786562) | 0.0 | Click |
| 28 | complement(1920569..1920985) | PHAGE_Lactoc_1: TerS; CVCAS_1853; phage(gi13786561) | 6e-62 | Click |
| 29 | complement(1921047..1921117) | tRNA | N/A | Click |
| 30 | complement(1921341..1921763) | PHAGE_Lactoc_1: ALT; CVCAS_1854; phage(gi13786560) | 1e-78 | Click |
| 31 | complement(1922440..1922625) | PHAGE_Lactoc_bIL309: Orf29; CVCAS_1855; phage(gi13095834) | 6e-22 | Click |
| 32 | complement(1922633..1922836) | hypothetical protein; CVCAS_1856 | N/A | Click |
| 33 | complement(1922836..1922958) | hypothetical protein; CVCAS_1857 | N/A | Click |
| 34 | complement(1923132..1923275) | PHAGE_Lactoc_bIL309: Orf27; CVCAS_1858; phage(gi13095832) | 2e-21 | Click |
| 35 | complement(1923353..1924033) | PHAGE_Lactoc_r1t: hypothetical protein r1tp22; CVCAS_1859; phage(gi23455741) | 8e-129 | Click |
| 36 | complement(1924060..1924332) | PHAGE_Lactoc_1: ORF22; CVCAS_1860; phage(gi13786553) | 1e-23 | Click |
| 37 | complement(1924336..1924755) | PHAGE_Lactoc_1: DUT; CVCAS_1861; phage(gi13786552) | 2e-74 | Click |
| 38 | complement(1924752..1925426) | PHAGE_Lactoc_1: ORF19; CVCAS_1862; phage(gi13786550) | 2e-35 | Click |
| 39 | complement(1925595..1925795) | PHAGE_Lactoc_1: ORF18; CVCAS_1863; phage(gi13786549) | 4e-12 | Click |
| 40 | complement(1926304..1926543) | PHAGE_Lactoc_r1t: hypothetical protein r1tp16; CVCAS_1864; phage(gi23455735) | 5e-38 | Click |
| 41 | complement(1926536..1926730) | PHAGE_Lactoc_bIL285: Orf19; CVCAS_1865; phage(gi13095699) | 4e-29 | Click |
| 42 | complement(1926733..1927122) | PHAGE_Lactoc_ul36: putative RusA-like resolvase; CVCAS_1866; phage(gi21716088) | 1e-72 | Click |
| 43 | complement(1927112..1927276) | PHAGE_Lactoc_lato: hypothetical protein P335p13; CVCAS_1867; phage(gi30089874) | 1e-24 | Click |
| 44 | complement(1927257..1928174) | PHAGE_Lactoc_r1t: putative replication protein DnaC; CVCAS_1868; phage(gi23455731) | 3e-143 | Click |
| 45 | complement(1928184..1928990) | PHAGE_Lactoc_r1t: putative DNA replication protein; CVCAS_1869; phage(gi23455730) | 9e-43 | Click |
| 46 | complement(1929115..1929540) | PHAGE_Lactoc_1: SSB; CVCAS_1870; phage(gi13786543) | 7e-49 | Click |
| 47 | complement(1929533..1930291) | PHAGE_Lactoc_ul36: putative translation initiation factor; CVCAS_1871; phage(gi21716084) | 1e-147 | Click |
| 48 | complement(1930300..1930818) | PHAGE_Lactoc_bIL285: Orf13; CVCAS_1872; phage(gi13095693) | 2e-92 | Click |
| 49 | complement(1930918..1931145) | PHAGE_Lactoc_1: ORF8; CVCAS_1873; phage(gi13786539) | 2e-11 | Click |
| 50 | complement(1931147..1931347) | PHAGE_Strept_2: hypothetical protein SpyM3_0967; CVCAS_1874; phage(gi28876251) | 2e-08 | Click |
| 51 | 1931498..1931776 | conserved hypothetical protein; CVCAS_1875 | N/A | Click |
| 52 | complement(1931806..1932000) | PHAGE_Staphy_JD007: hypothetical protein; CVCAS_1876; phage(gi428783123) | 1e-05 | Click |
| 53 | complement(1932095..1932364) | conserved hypothetical protein; CVCAS_1877 | N/A | Click |
| 54 | complement(1932377..1933144) | PHAGE_Brocho_NF5: gp30; CVCAS_1878; phage(gi327197615) | 3e-74 | Click |
| 55 | complement(1933157..1933396) | PHAGE_Lactoc_T: Cro repressor; CVCAS_1879; phage(gi14251161) | 1e-36 | Click |
| 56 | 1933502..1933759 | PHAGE_Staphy_3: hypothetical protein SPTP3103_gp07; CVCAS_1880; phage(gi156604024) | 8e-17 | Click |
| 57 | complement(1933749..1933958) | hypothetical protein; CVCAS_1881 | N/A | Click |
| 58 | 1934113..1934655 | hypothetical protein; CVCAS_1882 | N/A | Click |
| 59 | complement(1934787..1934987) | PHAGE_Lactoc_1: ORF9; CVCAS_1883; phage(gi13786540) | 1e-11 | Click |
| 60 | 1935262..1935825 | PHAGE_Lactoc_1: CI; CVCAS_1884; phage(gi13786535) | 3e-17 | Click |
| 61 | 1935831..1936265 | PHAGE_Lactoc_1: ORF3; CVCAS_1885; phage(gi13786534) | 9e-16 | Click |
| 62 | 1936279..1936614 | conserved hypothetical protein; CVCAS_1886 | N/A | Click |
| 63 | 1936548..1936559 | attR CTTCATGAATGA | N/A | Click |
| 64 | 1936830..1937861 | PHAGE_Lactoc_bIL310: integrase; CVCAS_1887; phage(gi13095863) | 3e-76 | Click |
Region 5, total : 53 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2145779..2145793 | attL AACAAAAAAAGCCCT | N/A | Click |
| 2 | complement(2145814..2146593) | PHAGE_Lactoc_bIL309: lysin; CVCAS_2107; phage(gi13095861) | 3e-144 | Click |
| 3 | complement(2146593..2146892) | PHAGE_Lactoc_bIL309: holin; CVCAS_2108; phage(gi13095860) | 7e-37 | Click |
| 4 | complement(2146905..2147255) | PHAGE_Lactoc_r1t: hypothetical protein r1tp46; CVCAS_2109; phage(gi23455765) | 1e-53 | Click |
| 5 | complement(2147268..2147504) | PHAGE_Lactoc_1706: hypothetical protein LaP1706_gp22; CVCAS_2110; phage(gi182637499) | 8e-33 | Click |
| 6 | complement(2147516..2151583) | PHAGE_Lactoc_bIL309: host-specificity; CVCAS_2111; phage(gi13095858) | 0.0 | Click |
| 7 | complement(2151580..2153109) | PHAGE_Lactoc_bIL309: Orf52; CVCAS_2112; phage(gi13095857) | 8e-125 | Click |
| 8 | complement(2153119..2155332) | PHAGE_Strept_3: putative human platelet-binding protein; CVCAS_2113; phage(gi28876274) | 3e-95 | Click |
| 9 | complement(2155322..2156029) | PHAGE_Lactob_phig1e: hypothetical protein phig1ep25; CVCAS_2114; phage(gi23455810) | 5e-17 | Click |
| 10 | complement(2156045..2156452) | conserved hypothetical protein; CVCAS_2115 | N/A | Click |
| 11 | complement(2156509..2156985) | PHAGE_Bacill_PBC1: major capsid protein gpP; CVCAS_2116; phage(gi389060336) | 6e-22 | Click |
| 12 | complement(2156996..2157430) | conserved hypothetical protein; CVCAS_2117 | N/A | Click |
| 13 | complement(2157430..2157759) | PHAGE_Bacill_PBC1: putative minor capsid protein 2; CVCAS_2118; phage(gi389060334) | 2e-12 | Click |
| 14 | complement(2157756..2158100) | PHAGE_Bacill_PBC1: putative minor capsid protein 1; CVCAS_2119; phage(gi389060333) | 2e-10 | Click |
| 15 | complement(2158090..2158491) | PHAGE_Bacill_PBC1: hypothetical protein; CVCAS_2120; phage(gi389060332) | 3e-12 | Click |
| 16 | complement(2158565..2158801) | PHAGE_Brocho_NF5: gp6.1; CVCAS_2121; phage(gi327197590) | 1e-17 | Click |
| 17 | complement(2158830..2159747) | PHAGE_Natria_PhiCh1: capsid protein gpE; CVCAS_2122; phage(gi22091115) | 5e-08 | Click |
| 18 | complement(2159762..2160826) | PHAGE_Methan_psiM100: putative structural protein; CVCAS_2123; phage(gi11863104) | 2e-17 | Click |
| 19 | complement(2160842..2161672) | PHAGE_Natria_PhiCh1: capsid protein gpC; CVCAS_2124; phage(gi22091111) | 8e-08 | Click |
| 20 | complement(2161665..2163194) | PHAGE_Vibrio_SIO_2: capsid portal protein; CVCAS_2125; phage(gi371496385) | 4e-25 | Click |
| 21 | complement(2163207..2164658) | PHAGE_Lister_B054: TerL; CVCAS_2126; phage(gi157325286) | 6e-154 | Click |
| 22 | complement(2164639..2165136) | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_28; CVCAS_2127; phage(gi13487829) | 4e-19 | Click |
| 23 | complement(2166426..2166497) | tRNA | N/A | Click |
| 24 | complement(2166799..2167221) | PHAGE_Lactoc_bIL309: Orf36; CVCAS_2129; phage(gi13095841) | 1e-53 | Click |
| 25 | complement(2167299..2167460) | hypothetical protein; CVCAS_2130 | N/A | Click |
| 26 | complement(2167780..2167998) | PHAGE_Lactoc_ul36: hypothetical protein ul36_29; CVCAS_2131; phage(gi21716100) | 2e-34 | Click |
| 27 | complement(2168059..2168382) | PHAGE_Lactoc_T: hypothetical protein BK5-Tp56; CVCAS_2132; phage(gi14251179) | 2e-50 | Click |
| 28 | complement(2168385..2168756) | PHAGE_Lactoc_1: ORF23; CVCAS_2133; phage(gi13786554) | 6e-36 | Click |
| 29 | complement(2168749..2168901) | PHAGE_Lactoc_ul36: hypothetical protein ul36_26; CVCAS_2134; phage(gi21716097) | 3e-24 | Click |
| 30 | complement(2168933..2169184) | PHAGE_Lactoc_ul36: hypothetical protein ul36_25; CVCAS_2135; phage(gi21716096) | 7e-21 | Click |
| 31 | complement(2169181..2169369) | PHAGE_Lactoc_bIBB29: hypothetical protein bIBB29_gp37; CVCAS_2136; phage(gi194097553) | 8e-23 | Click |
| 32 | complement(2169387..2169749) | PHAGE_Lactoc_bIBB29: hypothetical protein bIBB29_gp37; CVCAS_2137; phage(gi194097553) | 3e-30 | Click |
| 33 | complement(2169753..2170172) | PHAGE_Lactoc_bIL309: dUTPase; CVCAS_2138; phage(gi13095829) | 4e-74 | Click |
| 34 | complement(2170169..2170843) | PHAGE_Lactoc_bIL309: Orf23; CVCAS_2139; phage(gi13095828) | 8e-26 | Click |
| 35 | complement(2170836..2170988) | PHAGE_Lactoc_ul36: hypothetical protein ul36_22; CVCAS_2140; phage(gi21716093) | 7e-24 | Click |
| 36 | complement(2170985..2171374) | hypothetical protein; CVCAS_2141 | N/A | Click |
| 37 | complement(2171386..2171661) | hypothetical protein; CVCAS_2142 | N/A | Click |
| 38 | complement(2171670..2171876) | PHAGE_Lactoc_ul36: hypothetical protein ul36_19; CVCAS_2143; phage(gi21716090) | 3e-34 | Click |
| 39 | complement(2171984..2172394) | PHAGE_Lactoc_bIL309: Orf17; CVCAS_2144; phage(gi13095822) | 2e-78 | Click |
| 40 | complement(2172407..2172649) | conserved hypothetical protein; CVCAS_2145 | N/A | Click |
| 41 | complement(2172642..2173556) | PHAGE_Lactoc_phiLC3: putative replication initiator protein; CVCAS_2146; phage(gi45597402) | 4e-64 | Click |
| 42 | complement(2173820..2174746) | PHAGE_Lactoc_r1t: hypothetical protein r1tp10; CVCAS_2147; phage(gi23455729) | 4e-168 | Click |
| 43 | complement(2174743..2175576) | PHAGE_Lactoc_r1t: hypothetical protein r1tp09; CVCAS_2148; phage(gi23455728) | 6e-144 | Click |
| 44 | complement(2175679..2175927) | PHAGE_Lactoc_lato: hypothetical protein P335p05; CVCAS_2149; phage(gi30089866) | 8e-30 | Click |
| 45 | complement(2175941..2176063) | conserved hypothetical protein; CVCAS_2150 | N/A | Click |
| 46 | complement(2176060..2176176) | conserved hypothetical protein; CVCAS_2151 | N/A | Click |
| 47 | complement(2176258..2176947) | PHAGE_Entero_phiFL3A: anti-repressor protein; CVCAS_2152; phage(gi281416221) | 2e-37 | Click |
| 48 | complement(2177006..2177239) | PHAGE_Lactoc_bIL309: repressor; CVCAS_2153; phage(gi13095812) | 5e-09 | Click |
| 49 | 2177416..2177826 | PHAGE_Lactoc_bIL309: repressor; CVCAS_2154; phage(gi13095808) | 2e-12 | Click |
| 50 | 2177837..2178421 | PHAGE_Lactoc_bIL312: Orf4; CVCAS_2155; phage(gi13095895) | 3e-48 | Click |
| 51 | 2178477..2179016 | PHAGE_Lactoc_ul36: hypothetical protein ul36_02; CVCAS_2156; phage(gi21716074) | 1e-05 | Click |
| 52 | 2179017..2179031 | attR AACAAAAAAAGCCCT | N/A | Click |
| 53 | 2179142..2180599 | PHAGE_Lister_A118: putative integrase; CVCAS_2157; phage(gi16798814) | 4e-58 | Click |
| 54 | complement(2180750..2181823) | competence protein ComGB; CVCAS_2158 | N/A | Click |
| 55 | complement(2181717..2182607) | competence protein ComGA; CVCAS_2159 | N/A | Click |
| 56 | complement(2182776..2187692) | PHAGE_Bacill_Eoghan: DNA polymerase III alpha subunit; CVCAS_2160; phage(gi460041974) | 4e-19 | Click |
Region 6, total : 20 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2270197..2270215 | attL ACGCTTTTTACTACGTTCG | N/A | Click |
| 2 | complement(2270226..2271410) | PHAGE_Lactoc_bIL310: integrase; CVCAS_2227; phage(gi13095863) | 3e-99 | Click |
| 3 | complement(2274556..2274750) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p09; CVCAS_2228; phage(gi13095870) | 8e-30 | Click |
| 4 | complement(2274764..2275315) | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p12; CVCAS_2229; phage(gi13095873) | 2e-88 | Click |
| 5 | complement(2275327..2275710) | PHAGE_Lactoc_bIL310: immunity repressor; CVCAS_2230; phage(gi13095874) | 2e-48 | Click |
| 6 | 2275968..2276165 | PHAGE_Lactoc_bIL310: repressor; CVCAS_2231; phage(gi13095875) | 7e-24 | Click |
| 7 | complement(2276599..2277432) | conserved hypothetical protein; CVCAS_2232 | N/A | Click |
| 8 | 2277495..2277680 | PHAGE_Strept_2: hypothetical protein SpyM3_0967; CVCAS_2233; phage(gi28876251) | 2e-07 | Click |
| 9 | 2277799..2277993 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p16; CVCAS_2234; phage(gi13095877) | 5e-28 | Click |
| 10 | 2277998..2278423 | PHAGE_Lactoc_bIL312: Orf9; CVCAS_2235; phage(gi13095900) | 3e-72 | Click |
| 11 | 2278435..2278716 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p19; CVCAS_2236; phage(gi13095880) | 6e-44 | Click |
| 12 | 2278759..2278998 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p20; CVCAS_2237; phage(gi13095881) | 3e-39 | Click |
| 13 | 2279246..2279557 | hypothetical protein; CVCAS_2238 | N/A | Click |
| 14 | 2279554..2279883 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p23; CVCAS_2239; phage(gi13095884) | 1e-54 | Click |
| 15 | 2279887..2280681 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; CVCAS_2240; phage(gi13095885) | 3e-144 | Click |
| 16 | 2280692..2282326 | PHAGE_Lactoc_bIL310: helicase; CVCAS_2241; phage(gi13095886) | 0.0 | Click |
| 17 | 2282536..2282718 | PHAGE_Lactoc_bIL312: Orf17; CVCAS_2242; phage(gi13095908) | 4e-25 | Click |
| 18 | 2282744..2283352 | PHAGE_Lactoc_bIL312: Orf18; CVCAS_2243; phage(gi13095909) | 2e-93 | Click |
| 19 | 2283361..2283951 | PHAGE_Lactob_1: protease-scaffold-major head protein; CVCAS_2244; phage(gi219563201) | 8e-37 | Click |
| 20 | 2285453..2285471 | attR ACGCTTTTTACTACGTTCG | N/A | Click |
| 21 | 2285634..2285834 | conserved hypothetical protein; CVCAS_2245 | N/A | Click |
| 22 | complement(2285893..2287233) | PHAGE_Acanth_moumouvirus: glutamine synthetase; CVCAS_2246; phage(gi441432525) | 2e-09 | Click |