Definition Pseudomonas putida BIRD-1, complete genome.
Accession CP002290
Length 5,731,541
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3114451..3114462  attL    GGCCCGACCACT  N/A  Click
2 complement(3114555..3117596)  PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp22; PPUBIRD1_2752; phage(gi209552441)  5e-143  Click
3 complement(3117631..3118032)  PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp21; PPUBIRD1_2753; phage(gi209552440)  2e-26  Click
4 complement(3118032..3118517)  PHAGE_Pseudo_phi297: hypothetical protein; PPUBIRD1_2754; phage(gi374531302)  7e-42  Click
5 complement(3118514..3121849)  PHAGE_Pseudo_MP42: putative tail component protein; PPUBIRD1_2755; phage(gi399528622)  9e-129  Click
6 complement(3123247..3123576)  Hypothetical protein, conserved; PPUBIRD1_2757  N/A  Click
7 complement(3123617..3124120)  PHAGE_Salico_CGphi29: hypothetical protein; PPUBIRD1_2758; phage(gi472340186)  3e-12  Click
8 complement(3124176..3124562)  PHAGE_Marino_P12026: hypothetical protein; PPUBIRD1_2759; phage(gi399528327)  1e-09  Click
9 complement(3124555..3125055)  HK97 family phage protein; PPUBIRD1_2760  N/A  Click
10 complement(3125059..3125238)  Hypothetical protein, conserved; PPUBIRD1_2761  N/A  Click
11 complement(3125570..3125911)  PHAGE_Xantho_CP1: hypothetical protein; PPUBIRD1_2762; phage(gi431811005)  3e-09  Click
12 complement(3126496..3127680)  PHAGE_Xantho_CP1: putative head protein; PPUBIRD1_2764; phage(gi431811003)  8e-95  Click
13 complement(3127683..3128540)  PHAGE_Xantho_CP1: hypothetical protein; PPUBIRD1_2765; phage(gi431811002)  1e-42  Click
14 complement(3128544..3129854)  PHAGE_Xantho_CP1: putative head portal protein; PPUBIRD1_2766; phage(gi431811001)  5e-82  Click
15 complement(3130005..3131684)  PHAGE_Entero_2008: putative phage terminase-like protein large subunit; PPUBIRD1_2768; phage(gi209427775)  0.0  Click
16 3132835..3132846  attL    AGCAGTTCCAGC  N/A  Click
17 complement(3133327..3133629)  PHAGE_Erwini_PEp14: hypothetical protein; PPUBIRD1_2770; phage(gi374531878)  2e-07  Click
18 complement(3133644..3134015)  PHAGE_Erwini_PEp14: holin; PPUBIRD1_2771; phage(gi374531877)  4e-08  Click
19 complement(3134041..3134463)  Host specificity protein J; PPUBIRD1_2772  N/A  Click
20 3134832..3135233  PHAGE_Haemop_HP2: hypothetical protein HP2p14; PPUBIRD1_2773; phage(gi17981828)  1e-17  Click
21 complement(3136042..3136383)  PHAGE_Pseudo_PAJU2: putative antitermination protein Q; PPUBIRD1_2774; phage(gi209552491)  2e-11  Click
22 complement(3136443..3136670)  Hypothetical protein, conserved; PPUBIRD1_2775  N/A  Click
23 complement(3137032..3138330)  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; PPUBIRD1_2777; phage(gi16130540)  7e-15  Click
24 complement(3138327..3138755)  PHAGE_Psychr_pOW20_A: hypothetical protein; PPUBIRD1_2778; phage(gi472339811)  8e-16  Click
25 complement(3138752..3139048)  PHAGE_Salmon_SPN9CC: hypothetical protein; PPUBIRD1_2779; phage(gi389060524)  2e-33  Click
26 complement(3139051..3139860)  PHAGE_Entero_mEpX1: putative replication protein DnaC; PPUBIRD1_2780; phage(gi428781919)  3e-35  Click
27 complement(3139850..3140662)  PHAGE_Pseudo_PAJU2: putative replication protein O; PPUBIRD1_2781; phage(gi209552482)  9e-30  Click
28 3141164..3142045  PHAGE_Pseudo_phi297: putative phage repressor; PPUBIRD1_2782; phage(gi374531272)  2e-47  Click
29 complement(3142074..3142391)  PHAGE_Pseudo_F116: hypothetical protein F116p28; PPUBIRD1_2783; phage(gi56692946)  3e-19  Click
30 3143197..3143580  PHAGE_Pseudo_F10: Conserved hypothetical protein; putative transcriptional regulator, LuxR family; PPUBIRD1_2784; phage(gi148912803)  2e-18  Click
31 3143599..3143937  Hypothetical protein, conserved; PPUBIRD1_2785  N/A  Click
32 3143934..3144431  PHAGE_Xantho_vB_XveM_DIBBI: single-stranded DNA-binding protein; PPUBIRD1_2786; phage(gi389060431)  1e-51  Click
33 3144434..3144595  Hypothetical protein, conserved; PPUBIRD1_2787  N/A  Click
34 3144684..3145031  PHAGE_Vibrio_VvAW1: hypothetical protein; PPUBIRD1_2788; phage(gi460042912)  7e-26  Click
35 3145058..3145873  PHAGE_Entero_cdtI: hypothetical protein PcdtI_gp38; PPUBIRD1_2789; phage(gi148609420)  3e-51  Click
36 3147050..3147496  PHAGE_Pectob_ZF40: putative methylase; PPUBIRD1_2790; phage(gi422936661)  7e-06  Click
37 3148244..3148894  Hypothetical protein, conserved; PPUBIRD1_2791  N/A  Click
38 3149959..3150600  PHAGE_Pseudo_F116: hypothetical protein F116p07; PPUBIRD1_2792; phage(gi56692934)  6e-33  Click
39 3150597..3150848  Hypothetical protein, conserved; PPUBIRD1_2793  N/A  Click
40 3150845..3151072  Hypothetical protein, conserved; PPUBIRD1_2794  N/A  Click
41 3151069..3151464  Hypothetical protein, conserved; PPUBIRD1_2795  N/A  Click
42 3152215..3152226  attR    AGCAGTTCCAGC  N/A  Click
43 3152472..3153665  PHAGE_Bordet_1: integrase; PPUBIRD1_2799; phage(gi45569541)  3e-46  Click
44 3157233..3157244  attR    GGCCCGACCACT  N/A  Click