Definition Clostridium acetobutylicum EA 2018, complete genome.
Accession CP002118
Length 3,940,230
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1992280..1992291  attL    ATAAATTTATTA  N/A  Click
2 2005658..2006176  PHAGE_Lactob_LP65: hypothetical protein LP65_gp086; CEA_G1867; phage(gi56693134)  2e-07  Click
3 complement(2006202..2006411)  Conserved hypothetical protein; CEA_G1868  N/A  Click
4 complement(2006390..2007127)  PHAGE_Staphy_K: putative ribonuclease; CEA_G1869; phage(gi48696415)  5e-14  Click
5 complement(2007143..2008513)  PHAGE_Pseudo_LIT1: N4 gp25-like protein; CEA_G1870; phage(gi282598882)  5e-11  Click
6 complement(2008510..2009643)  PHAGE_Vibrio_VBP47: ATPase; CEA_G1871; phage(gi472340581)  2e-15  Click
7 complement(2009655..2010293)  PHAGE_Acanth_moumouvirus: hypothetical protein; CEA_G1872; phage(gi441432748)  3e-09  Click
8 2010598..2011584  Conserved hypothetical protein; CEA_G1873  N/A  Click
9 2011612..2011893  Flavodoxin oxidoreductase; CEA_G1874  N/A  Click
10 complement(2012064..2012732)  PHAGE_Entero_EPS7: putative phage tail protein; CEA_G1875; phage(gi182682945)  6e-05  Click
11 complement(2012760..2013080)  Conserved hypothetical protein; CEA_G1876  N/A  Click
12 2013320..2013331  attR    ATAAATTTATTA  N/A  Click
13 complement(2013411..2013623)  Conserved hypothetical protein; CEA_G1877  N/A  Click
14 2013666..2015246  PHAGE_Bacill_BMBtp2: resolvase; CEA_G1878; phage(gi431809469)  3e-28  Click
Region 2, total : 86 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2017144..2017155  attL    TTTTACTTTATA  N/A  Click
2 2017500..2017512  attL    TTAGTAATTTAAA  N/A  Click
3 complement(2022085..2023140)  PHAGE_Clostr_phiSM101: autolytic lysozyme; CEA_G1889; phage(gi110804057)  3e-20  Click
4 complement(2023158..2023415)  PHAGE_Clostr_phiSM101: hypothetical protein; CEA_G1890; phage(gi110804030)  5e-05  Click
5 complement(2023427..2023693)  Conserved hypothetical protein; CEA_G1891  N/A  Click
6 complement(2023723..2027934)  PHAGE_Clostr_phiCTP1: hypothetical phage structural protein; CEA_G1892; phage(gi304360688)  5e-82  Click
7 complement(2027966..2028340)  PHAGE_Clostr_phiSM101: hypothetical protein; CEA_G1893; phage(gi110804056)  1e-22  Click
8 complement(2028327..2028593)  PHAGE_Lactoc_bIL285: Orf59; CEA_G1894; phage(gi13095739)  1e-05  Click
9 complement(2028612..2029820)  PHAGE_Clostr_phiSM101: hypothetical protein; CEA_G1895; phage(gi110804045)  8e-10  Click
10 complement(2029822..2035281)  PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; CEA_G1896; phage(gi110804068)  6e-90  Click
11 complement(2035315..2035470)  Conserved hypothetical protein; CEA_G1897  N/A  Click
12 complement(2035497..2035826)  Conserved hypothetical protein; CEA_G1898  N/A  Click
13 complement(2035880..2036800)  PHAGE_Clostr_phiSM101: phage major tail protein, phi13 family subfamily; CEA_G1899; phage(gi110804026)  3e-19  Click
14 complement(2036845..2037168)  PHAGE_Clostr_PhiS63: gp10; CEA_G1900; phage(gi388570639)  2e-06  Click
15 complement(2037165..2037596)  PHAGE_Bacill_Fah: head-tail joining protein; CEA_G1901; phage(gi89152487)  2e-05  Click
16 complement(2037597..2037944)  PHAGE_Clostr_phiSM101: putative phage head-tail adaptor; CEA_G1902; phage(gi110804032)  7e-08  Click
17 complement(2037907..2038224)  PHAGE_Lactob_Sha1: phage protein DNA packaging protein; CEA_G1903; phage(gi418489807)  6e-12  Click
18 complement(2038512..2039702)  PHAGE_Staphy_phi7401PVL: phage major capsid protein; CEA_G1904; phage(gi448244667)  1e-73  Click
19 complement(2039704..2040474)  PHAGE_Lactob_JCL1032: putative ClpP protease; CEA_G1905; phage(gi418489116)  5e-62  Click
20 complement(2040437..2041546)  PHAGE_Staphy_phi7401PVL: portal protein; CEA_G1906; phage(gi448244665)  2e-83  Click
21 complement(2041693..2043468)  PHAGE_Lactob_JCL1032: putative terminase large subunit; CEA_G1907; phage(gi418489114)  0.0  Click
22 complement(2043458..2043913)  PHAGE_Geobac_E2: putative terminase small subunit; CEA_G1908; phage(gi148747728)  1e-31  Click
23 complement(2044089..2044400)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp43; CEA_G1909; phage(gi156603992)  1e-19  Click
24 complement(2044407..2044670)  Conserved hypothetical protein; CEA_G1910  N/A  Click
25 complement(2044765..2045142)  PHAGE_Bacill_BCP78: hypothetical protein; CEA_G1911; phage(gi410492926)  1e-10  Click
26 complement(2045135..2045314)  Phage regulatory Com-like protein, containing Zn-finger; CEA_G1912  N/A  Click
27 complement(2045302..2045655)  Conserved hypothetical protein; CEA_G1913  N/A  Click
28 complement(2045690..2045887)  Conserved hypothetical protein; CEA_G1914  N/A  Click
29 complement(2045847..2046065)  Conserved hypothetical protein; CEA_G1915  N/A  Click
30 complement(2046077..2046238)  metal-dependent hydrolase; CEA_G1916  N/A  Click
31 complement(2046369..2046563)  PHAGE_Clostr_phiSM101: hypothetical protein; CEA_G1917; phage(gi110804039)  7e-06  Click
32 complement(2046708..2047058)  PHAGE_Bacill_SP10: metal-dependent hydrolase; CEA_G1918; phage(gi418489659)  1e-06  Click
33 complement(2047076..2047264)  Conserved hypothetical protein; CEA_G1919  N/A  Click
34 complement(2047268..2047468)  Conserved hypothetical protein; CEA_G1920  N/A  Click
35 complement(2047483..2047647)  Conserved hypothetical protein; CEA_G1921  N/A  Click
36 complement(2047653..2047889)  membrane protein; CEA_G1922  N/A  Click
37 complement(2047905..2048057)  Large subunit of NADH-dependent glutamate synthase; CEA_G1923  N/A  Click
38 complement(2048104..2048721)  PHAGE_Thermu_TMA: DNA polymerase; CEA_G1924; phage(gi343960414)  2e-10  Click
39 complement(2048734..2049609)  membrane protein; CEA_G1925  N/A  Click
40 2049998..2050219  Conserved hypothetical protein; CEA_G1926  N/A  Click
41 complement(2050250..2050462)  PHAGE_Entero_phiEf11: conserved hypothetical protein; CEA_G1927; phage(gi282598725)  3e-17  Click
42 complement(2050515..2050733)  Zn-finger containing protein; CEA_G1928  N/A  Click
43 complement(2050964..2051236)  Conserved hypothetical protein; CEA_G1929  N/A  Click
44 complement(2051409..2051936)  PHAGE_Clostr_phi3626: Gp43 protein; CEA_G1930; phage(gi20066006)  4e-18  Click
45 complement(2052068..2052259)  Conserved hypothetical protein; CEA_G1931  N/A  Click
46 complement(2052307..2052648)  Conserved hypothetical protein; CEA_G1932  N/A  Click
47 complement(2052731..2052952)  Conserved hypothetical protein; CEA_G1933  N/A  Click
48 complement(2052999..2053400)  PHAGE_Brocho_NF5: gp45; CEA_G1934; phage(gi327197630)  5e-32  Click
49 complement(2053405..2053587)  Zn-finger containing protein; CEA_G1935  N/A  Click
50 complement(2053587..2053871)  Conserved hypothetical protein; CEA_G1936  N/A  Click
51 complement(2053959..2054156)  Conserved hypothetical protein; CEA_G1937  N/A  Click
52 complement(2054168..2054500)  PHAGE_Clostr_phiSM101: hypothetical protein; CEA_G1938; phage(gi110804067)  8e-07  Click
53 complement(2054501..2055004)  Conserved hypothetical protein; CEA_G1939  N/A  Click
54 complement(2054967..2055461)  hypothetical protein; CEA_G1940  N/A  Click
55 complement(2055458..2055610)  Nitroreductase family protein; CEA_G1941  N/A  Click
56 complement(2055603..2055980)  PHAGE_Clostr_phiSM101: hypothetical protein; CEA_G1942; phage(gi110804041)  1e-11  Click
57 complement(2055973..2056239)  Conserved hypothetical protein; CEA_G1943  N/A  Click
58 complement(2056355..2056570)  Conserved hypothetical protein; CEA_G1944  N/A  Click
59 complement(2056607..2056978)  PHAGE_Halovi_HVTV_1: MazG-like protein; CEA_G1945; phage(gi443404610)  8e-14  Click
60 complement(2056968..2057162)  Conserved hypothetical protein; CEA_G1946  N/A  Click
61 complement(2057253..2057780)  Conserved hypothetical protein; CEA_G1947  N/A  Click
62 complement(2057790..2058638)  PHAGE_Bacill_IEBH: DNA replication protein DnaC; CEA_G1948; phage(gi197261519)  2e-41  Click
63 complement(2058577..2059416)  PHAGE_Strept_SM1: gp19; CEA_G1949; phage(gi32469450)  4e-50  Click
64 complement(2059517..2059828)  Conserved hypothetical protein; CEA_G1950  N/A  Click
65 complement(2059839..2060528)  PHAGE_Lactoc_ul36: putative translation initiation factor; CEA_G1951; phage(gi21716084)  3e-09  Click
66 complement(2060529..2060666)  Conserved hypothetical protein; CEA_G1952  N/A  Click
67 complement(2060671..2061246)  PHAGE_Strept_Dp_1: hypothetical protein; CEA_G1953; phage(gi327198335)  2e-18  Click
68 complement(2061249..2061443)  Conserved hypothetical protein; CEA_G1954  N/A  Click
69 complement(2061494..2061697)  Conserved hypothetical protein; CEA_G1955  N/A  Click
70 complement(2061702..2061941)  PHAGE_Bacill_phBC6A51: Transcription state regulatory protein abrB; CEA_G1956; phage(gi31415778)  2e-16  Click
71 complement(2062068..2062220)  flavoprotein; CEA_G1957  N/A  Click
72 complement(2062233..2062421)  Conserved hypothetical protein; CEA_G1958  N/A  Click
73 2062505..2062993  PHAGE_Lactob_Lj928: hypothetical protein Ljo_1454; CEA_G1959; phage(gi41179299)  1e-25  Click
74 complement(2062982..2063422)  Conserved hypothetical protein; CEA_G1960  N/A  Click
75 complement(2063436..2064170)  PHAGE_Brocho_BL3: gp34; CEA_G1961; phage(gi327409426)  1e-18  Click
76 complement(2064198..2064347)  Transcriptional regulator, MarR/EmrR family; CEA_G1962  N/A  Click
77 complement(2064437..2064721)  Phage related transcriptional regulator (Xre family); CEA_G1963  N/A  Click
78 2064929..2065300  PHAGE_Clostr_PhiS63: gp26; CEA_G1964; phage(gi388570671)  3e-09  Click
79 2065449..2065694  Conserved hypothetical protein; CEA_G1965  N/A  Click
80 complement(2065705..2066895)  PHAGE_Megavi_chiliensis: putative DNA mismatch repair protein muts-like protein; CEA_G1966; phage(gi363540756)  2e-06  Click
81 2067229..2067441  Conserved hypothetical protein; CEA_G1967  N/A  Click
82 2067452..2069179  PHAGE_Strept_phiNJ2: putative recombinase; CEA_G1968; phage(gi414090258)  4e-38  Click
83 2069179..2069388  Conserved hypothetical protein; CEA_G1969  N/A  Click
84 complement(2069483..2069869)  membrane protein; CEA_G1970  N/A  Click
85 complement(2070085..2070915)  hypothetical protein; CEA_G1971  N/A  Click
86 complement(2071284..2071448)  Anaerobic Cobalt chelatase, cbiK; CEA_G1972  N/A  Click
87 2071468..2071480  attR    TTAGTAATTTAAA  N/A  Click
88 complement(2071476..2071652)  Conserved hypothetical protein; CEA_G1973  N/A  Click
89 2071768..2073363  PHAGE_Lister_A118: putative integrase; CEA_G1974; phage(gi16798814)  4e-34  Click
90 2083234..2083245  attR    TTTTACTTTATA  N/A  Click