Definition Brucella pinnipedialis B2/94 chromosome 1, complete sequence.
Accession CP002078
Length 2,138,342
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 524443..524457  attL    TTGAATGCAGACAAG  N/A  Click
2 531314..533182  PHAGE_Megavi_lba: putative dTDP-d-glucose 4 6-dehydratase; BPI_I538; phage(gi448825504)  2e-19  Click
3 complement(533169..534176)  glycosyl transferase, group 4 family protein; BPI_I539  N/A  Click
4 534554..534628  tRNA  N/A  Click
5 534835..535653  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BPI_I541; phage(gi23501424)  5e-25  Click
6 535385..536328  PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; BPI_I542; phage(gi52430457)  0.0  Click
7 536385..536615  PROPHAGE_Brucel_1330: transposase, interruption-C; BPI_I543; phage(gi52430458)  9e-40  Click
8 complement(536642..537034)  PROPHAGE_Brucel_1330: IS711, transposase orfB; BPI_I544; phage(gi23501420)  3e-71  Click
9 complement(537066..537377)  PROPHAGE_Brucel_1330: IS711, transposase orfA; BPI_I545; phage(gi23501419)  1e-54  Click
10 complement(538887..539666)  PHAGE_Burkho_phiE255: gp30, formyl transferase, putative; BPI_I548; phage(gi134288807)  8e-12  Click
11 complement(539693..540547)  WbkB protein; BPI_I549  N/A  Click
12 complement(540544..541302)  PHAGE_Amsact_: putative ATP-binding cassette transporter; BPI_I550; phage(gi9964444)  5e-10  Click
13 complement(541299..542081)  O-antigen export system permease protein RfbD; BPI_I551  N/A  Click
14 complement(542096..543199)  PHAGE_Bathyc_BpV1: hypothetical protein; BPI_I552; phage(gi313768026)  6e-22  Click
15 complement(543207..544295)  PHAGE_Acanth_1: hypothetical protein ATCV1_Z804L; BPI_I553; phage(gi155371751)  2e-135  Click
16 544631..545242  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BPI_I554; phage(gi23501424)  3e-80  Click
17 545565..546359  PHAGE_RD114_retrovirus: gag-pol precursor polyprotein; BPI_I556; phage(gi157939613)  1e-05  Click
18 546451..546762  PROPHAGE_Brucel_1330: IS711, transposase orfA; BPI_I557; phage(gi23501419)  6e-54  Click
19 546794..547186  PROPHAGE_Brucel_1330: IS711, transposase orfB; BPI_I558; phage(gi23501420)  3e-71  Click
20 547187..547426  PROPHAGE_Brucel_1330: ISBm1, transposase orfB, interruption-C; BPI_I559; phage(gi52430460)  3e-41  Click
21 547557..548675  PHAGE_Ostreo_2: putative glycosyl transferase, group 1; BPI_I560; phage(gi314055103)  4e-05  Click
22 548733..549101  PROPHAGE_Brucel_1330: IS5 family transposase orfA; BPI_I561; phage(gi23501422)  1e-66  Click
23 549197..549538  PROPHAGE_Brucel_1330: IS5 family transposase orfB; BPI_I562; phage(gi23501423)  2e-62  Click
24 complement(549628..550215)  PROPHAGE_Escher_CFT073: transposase insF; BPI_I563; phage(gi26249410)  2e-29  Click
25 550295..550774  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BPI_I564; phage(gi23501424)  3e-78  Click
26 550693..551109  PROPHAGE_Brucel_1330: ISBm1, transposase orfB; BPI_I565; phage(gi23501425)  1e-75  Click
27 complement(551006..551323)  transposase IS3/IS911 family protein; BPI_I566  N/A  Click
28 551469..551768  PROPHAGE_Xantho_306: transposase; BPI_I567; phage(gi21243165)  8e-31  Click
29 complement(552794..553186)  PROPHAGE_Brucel_1330: IS711, transposase orfB; BPI_I569; phage(gi23501420)  3e-71  Click
30 complement(553218..553529)  PROPHAGE_Brucel_1330: IS711, transposase orfA; BPI_I570; phage(gi23501419)  1e-54  Click
31 553604..553618  attR    TTGAATGCAGACAAG  N/A  Click
32 554206..555630  PHAGE_Acanth_1: hypothetical protein ATCV1_Z752L; BPI_I571; phage(gi155371699)  5e-15  Click
Region 2, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 603525..604679  PHAGE_Strept_6: terminase large subunit; BPI_I622; phage(gi93007440)  5e-59  Click
2 604711..605904  PHAGE_Marino_P12026: phage portal protein, HK97 family; BPI_I623; phage(gi399528319)  2e-18  Click
3 605901..606278  hypothetical protein; BPI_I624  N/A  Click
4 606265..606933  PHAGE_Marino_P12026: phage prohead protease; BPI_I625; phage(gi399528321)  2e-31  Click
5 606955..608229  PHAGE_Entero_phiP27: putative major capsid protein; BPI_I626; phage(gi18249904)  1e-87  Click
6 608433..608960  PHAGE_Rhodob_RcapNL: hypothetical protein; BPI_I627; phage(gi461474967)  4e-07  Click
7 608957..609295  PHAGE_Marino_P12026: phage head-tail adaptor; BPI_I628; phage(gi399528325)  2e-06  Click
8 609292..609459  hypothetical protein; BPI_I629  N/A  Click
9 609419..609826  PHAGE_Marino_P12026: hypothetical protein; BPI_I630; phage(gi399528327)  3e-05  Click
10 609867..610280  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; BPI_I631; phage(gi461474972)  2e-19  Click
11 610283..610618  gene transfer agent (GTA) like protein; BPI_I632  N/A  Click
12 610837..611382  PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; BPI_I634; phage(gi428782128)  7e-13  Click
13 611385..612017  PHAGE_Roseob_1: putative glycoside hydrolase; BPI_I635; phage(gi331028135)  3e-33  Click
14 612014..612889  PHAGE_Caulob_CcrColossus: putative tail protein; BPI_I636; phage(gi414088176)  6e-19  Click
15 612886..613320  PHAGE_Roseob_1: phage cell wall peptidase; BPI_I637; phage(gi331028137)  4e-30  Click
16 613324..617187  PHAGE_Roseob_1: gene transfer agent; BPI_I638; phage(gi331028138)  1e-179  Click