| Definition | Clostridium botulinum F str. 230613, complete genome. |
|---|---|
| Accession | CP002011 |
| Length | 3,993,083 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 32 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2013122..2013133 | attL ATTTATTGTATT | N/A | Click |
| 2 | complement(2013349..2013618) | integrase domain protein; CBF_1856 | N/A | Click |
| 3 | complement(2014512..2015099) | PHAGE_Deep_s_D6E: structure protein; CBF_1857; phage(gi423262348) | 2e-08 | Click |
| 4 | complement(2015228..2015986) | PHAGE_Clostr_phi8074_B1: endolysin CS74L; CBF_1858; phage(gi431810380) | 8e-54 | Click |
| 5 | complement(2016027..2016221) | conserved hypothetical protein; CBF_1859 | N/A | Click |
| 6 | complement(2016239..2016490) | PHAGE_Clostr_phiSM101: hypothetical protein; CBF_1860; phage(gi110804030) | 1e-09 | Click |
| 7 | complement(2016637..2016831) | hypothetical protein; CBF_1861 | N/A | Click |
| 8 | complement(2017226..2017393) | hypothetical protein; CBF_1862 | N/A | Click |
| 9 | complement(2017434..2017649) | hypothetical protein; CBF_1863 | N/A | Click |
| 10 | complement(2017651..2018010) | hypothetical protein; CBF_1864 | N/A | Click |
| 11 | complement(2018026..2018613) | hypothetical protein; CBF_1865 | N/A | Click |
| 12 | complement(2018631..2019092) | hypothetical protein; CBF_1866 | N/A | Click |
| 13 | complement(2019089..2019910) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CBF_1867; phage(gi326536865) | 8e-58 | Click |
| 14 | complement(2019917..2021074) | PHAGE_Clostr_phiCD6356: hypothetical protein; CBF_1868; phage(gi326536864) | 2e-44 | Click |
| 15 | complement(2021078..2021947) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CBF_1869; phage(gi326536863) | 5e-51 | Click |
| 16 | complement(2021963..2025463) | PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; CBF_1870; phage(gi110804068) | 0.0 | Click |
| 17 | complement(2025480..2025659) | hypothetical protein; CBF_1871 | N/A | Click |
| 18 | complement(2025719..2026063) | PHAGE_Clostr_phiSM101: hypothetical protein; CBF_1872; phage(gi110804055) | 1e-13 | Click |
| 19 | complement(2026125..2026727) | PHAGE_Clostr_phiSM101: phage major tail protein, phi13 family subfamily; CBF_1873; phage(gi110804026) | 1e-43 | Click |
| 20 | complement(2026795..2027151) | PHAGE_Bacill_BtCS33: putative structure protein; CBF_1874; phage(gi392972718) | 6e-12 | Click |
| 21 | complement(2027162..2027521) | PHAGE_Clostr_phiSM101: phage protein, HK97 gp10 family; CBF_1875; phage(gi110804042) | 5e-25 | Click |
| 22 | complement(2027521..2027889) | PHAGE_Clostr_phiSM101: putative phage head-tail adaptor; CBF_1876; phage(gi110804032) | 7e-13 | Click |
| 23 | complement(2027879..2028172) | PHAGE_Clostr_phiSM101: putative DNA packaging protein; CBF_1877; phage(gi110804046) | 5e-12 | Click |
| 24 | complement(2028257..2029489) | PHAGE_Clostr_phiSM101: phage major capsid protein, HK97 family; CBF_1878; phage(gi110804052) | 6e-101 | Click |
| 25 | complement(2029541..2030284) | PHAGE_Bacill_phIS3501: ATP-dependent Clp protease; CBF_1879; phage(gi422934330) | 4e-34 | Click |
| 26 | complement(2030277..2031527) | PHAGE_Clostr_phiSM101: phage portal protein, HK97 family; CBF_1880; phage(gi110804051) | 1e-58 | Click |
| 27 | complement(2031571..2031753) | hypothetical protein; CBF_1881 | N/A | Click |
| 28 | complement(2031777..2033534) | PHAGE_Geobac_E2: putative terminase large subunit; CBF_1882; phage(gi148747729) | 2e-120 | Click |
| 29 | complement(2033535..2034020) | PHAGE_Geobac_E2: putative terminase small subunit; CBF_1883; phage(gi148747728) | 1e-24 | Click |
| 30 | complement(2034168..2034635) | PHAGE_Clostr_phiSM101: HNH endonuclease domain protein; CBF_1884; phage(gi110804050) | 5e-37 | Click |
| 31 | complement(2034728..2036521) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; CBF_1885; phage(gi9631364) | 6e-15 | Click |
| 32 | complement(2036508..2036759) | hypothetical protein; CBF_1886 | N/A | Click |
| 33 | complement(2036811..2037332) | PHAGE_Staphy_JD007: exonuclease; CBF_1887; phage(gi428783211) | 9e-06 | Click |
| 34 | 2040080..2040091 | attR ATTTATTGTATT | N/A | Click |
Region 2, total : 50 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2525238..2525996) | PHAGE_Clostr_phiMMP04: cell wall hydrolase; CBF_2372; phage(gi414090458) | 3e-20 | Click |
| 2 | complement(2526536..2526652) | hypothetical protein; CBF_2373 | N/A | Click |
| 3 | complement(2527112..2527252) | putative peptidoglycan-binding protein; CBF_2374 | N/A | Click |
| 4 | 2528454..2528696 | PHAGE_Clostr_phiC2: putative repressor; CBF_2376; phage(gi134287382) | 2e-09 | Click |
| 5 | 2528881..2528994 | hypothetical protein; CBF_2377 | N/A | Click |
| 6 | complement(2529114..2529515) | PHAGE_Salisa_1: hypothetical protein; CBF_2378; phage(gi388570712) | 9e-08 | Click |
| 7 | complement(2529560..2529805) | hypothetical protein; CBF_2379 | N/A | Click |
| 8 | complement(2529811..2530002) | PHAGE_Strept_M102: hypothetical protein M102_gp24; CBF_2380; phage(gi242345595) | 7e-06 | Click |
| 9 | complement(2530431..2531198) | PHAGE_Clostr_phi8074_B1: endolysin CS74L; CBF_2381; phage(gi431810380) | 1e-29 | Click |
| 10 | complement(2531243..2531458) | conserved hypothetical protein; CBF_2382 | N/A | Click |
| 11 | complement(2531475..2531729) | PHAGE_Clostr_phiSM101: hypothetical protein; CBF_2383; phage(gi110804030) | 2e-15 | Click |
| 12 | complement(2531750..2532505) | hypothetical protein; CBF_2384 | N/A | Click |
| 13 | complement(2532667..2532849) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p34; CBF_2385; phage(gi134287367) | 5e-14 | Click |
| 14 | complement(2532851..2533192) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p33; CBF_2386; phage(gi134287366) | 3e-05 | Click |
| 15 | complement(2533204..2534385) | PHAGE_Clostr_phiC2: putative tail fiber protein; CBF_2387; phage(gi134287361) | 3e-46 | Click |
| 16 | complement(2534543..2535016) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p26; CBF_2388; phage(gi134287360) | 1e-15 | Click |
| 17 | complement(2536093..2536500) | PHAGE_Strept_1: hypothetical protein EJ-1p60; CBF_2390; phage(gi39653734) | 6e-21 | Click |
| 18 | complement(2536503..2536814) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p23; CBF_2391; phage(gi134287358) | 3e-07 | Click |
| 19 | complement(2536851..2537825) | PHAGE_Clostr_phiC2: putative hydrolase; CBF_2392; phage(gi134287357) | 4e-62 | Click |
| 20 | complement(2537841..2538518) | PHAGE_Clostr_phiC2: putative LysM; CBF_2393; phage(gi134287356) | 1e-27 | Click |
| 21 | complement(2538518..2540677) | PHAGE_Clostr_phiC2: putative tail tape measure protein; CBF_2394; phage(gi134287355) | 5e-106 | Click |
| 22 | complement(2540735..2541496) | PHAGE_Thermo_THSA_485A: hypothetical protein; CBF_2395; phage(gi397912628) | 2e-33 | Click |
| 23 | complement(2541733..2542146) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p16; CBF_2396; phage(gi134287351) | 2e-18 | Click |
| 24 | complement(2542164..2542628) | PHAGE_Clostr_phiC2: putative core tail; CBF_2397; phage(gi134287349) | 3e-30 | Click |
| 25 | complement(2542632..2543942) | PHAGE_Clostr_phiC2: putative sheath tail protein; CBF_2398; phage(gi134287348) | 5e-80 | Click |
| 26 | complement(2543944..2544114) | PHAGE_Lactob_KC5a: hypothetical protein; CBF_2399; phage(gi90592619) | 1e-06 | Click |
| 27 | complement(2544104..2544493) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; CBF_2400; phage(gi134287347) | 2e-20 | Click |
| 28 | complement(2544544..2544708) | hypothetical protein; CBF_2401 | N/A | Click |
| 29 | complement(2544722..2545213) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p11; CBF_2402; phage(gi134287346) | 6e-20 | Click |
| 30 | complement(2545213..2545596) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p10; CBF_2403; phage(gi134287345) | 8e-12 | Click |
| 31 | complement(2545598..2545942) | PHAGE_Brocho_BL3: gp10; CBF_2404; phage(gi327409400) | 9e-08 | Click |
| 32 | complement(2545956..2546921) | PHAGE_Entero_phiFL3A: coat protein; CBF_2405; phage(gi281416261) | 2e-88 | Click |
| 33 | complement(2546941..2547546) | PHAGE_Bacill_SPP1: hypothetical protein SPP1p020; CBF_2406; phage(gi22855064) | 1e-27 | Click |
| 34 | complement(2547567..2547830) | PHAGE_Clostr_phiCP26F: hypothetical protein; CBF_2407; phage(gi422933951) | 2e-18 | Click |
| 35 | complement(2547847..2548215) | PHAGE_Bacill_vB_BceM_Bc431v3: putative structural protein; CBF_2408; phage(gi472437604) | 4e-14 | Click |
| 36 | complement(2548246..2548440) | hypothetical protein; CBF_2409 | N/A | Click |
| 37 | complement(2548457..2549479) | PHAGE_Clostr_phiC2: putative head morphogenesis protein; CBF_2410; phage(gi134287339) | 2e-77 | Click |
| 38 | complement(2549469..2550920) | PHAGE_Clostr_phiC2: putative portal protein; CBF_2411; phage(gi134287338) | 7e-80 | Click |
| 39 | complement(2550933..2552342) | PHAGE_Lactoc_1: TerL; CBF_2412; phage(gi13786562) | 1e-157 | Click |
| 40 | complement(2552335..2552922) | PHAGE_Aggreg_S1249: putative terminase small subunit TerS; CBF_2413; phage(gi273809571) | 1e-20 | Click |
| 41 | complement(2553145..2553696) | PHAGE_Clostr_PhiS63: gp40; CBF_2414; phage(gi388570666) | 2e-16 | Click |
| 42 | complement(2553683..2554060) | hypothetical protein; CBF_2415 | N/A | Click |
| 43 | complement(2554069..2555433) | PHAGE_Entero_phiFL4A: DNA helicase; CBF_2416; phage(gi281416462) | 2e-154 | Click |
| 44 | complement(2555436..2555603) | hypothetical protein; CBF_2417 | N/A | Click |
| 45 | complement(2555596..2555784) | PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp30; CBF_2418; phage(gi48697220) | 1e-08 | Click |
| 46 | complement(2556138..2558561) | PHAGE_Entero_phiFL4A: VirE domain protein; CBF_2419; phage(gi281416460) | 0.0 | Click |
| 47 | complement(2558608..2559633) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p75; CBF_2420; phage(gi134287407) | 1e-47 | Click |
| 48 | complement(2559676..2559960) | hypothetical protein; CBF_2421 | N/A | Click |
| 49 | complement(2559999..2560229) | PHAGE_Clostr_phiCP13O: hypothetical protein; CBF_2422; phage(gi422935104) | 2e-10 | Click |
| 50 | complement(2560278..2561708) | PHAGE_Pectob_ZF40: putative methylase; CBF_2423; phage(gi422936661) | 2e-104 | Click |
Region 3, total : 48 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3429256..3429269 | attL TTATTTTTTATTCA | N/A | Click |
| 2 | complement(3440561..3440689) | PHAGE_Clostr_phiCD6356: hypothetical protein; CBF_3250; phage(gi326536860) | 2e-09 | Click |
| 3 | complement(3440776..3441063) | PHAGE_Bacill_phIS3501: phage protein; CBF_3251; phage(gi422934337) | 5e-08 | Click |
| 4 | complement(3441099..3441680) | PHAGE_Bacill_phIS3501: phage major tail protein; CBF_3252; phage(gi422934336) | 8e-23 | Click |
| 5 | complement(3441680..3442027) | PHAGE_Bacill_phIS3501: phage protein; CBF_3253; phage(gi422934335) | 2e-08 | Click |
| 6 | complement(3442024..3442407) | PHAGE_Bacill_phIS3501: gp10 family phage protein; CBF_3254; phage(gi422934334) | 7e-18 | Click |
| 7 | complement(3442400..3442726) | PHAGE_Bacill_phIS3501: phage head-tail adaptor; CBF_3255; phage(gi422934333) | 4e-11 | Click |
| 8 | complement(3442707..3443036) | PHAGE_Bacill_phIS3501: phage DNA packaging protein; CBF_3256; phage(gi422934332) | 1e-09 | Click |
| 9 | complement(3443053..3443208) | conserved domain protein; CBF_3257 | N/A | Click |
| 10 | complement(3443228..3444355) | PHAGE_Staphy_phi7401PVL: phage major capsid protein; CBF_3258; phage(gi448244667) | 5e-85 | Click |
| 11 | complement(3444348..3445148) | PHAGE_Bacill_phIS3501: ATP-dependent Clp protease; CBF_3259; phage(gi422934330) | 4e-64 | Click |
| 12 | complement(3445184..3445297) | phage portal protein, HK97 family; CBF_3260 | N/A | Click |
| 13 | complement(3445350..3446378) | PHAGE_Staphy_phi7401PVL: portal protein; CBF_3261; phage(gi448244665) | 9e-57 | Click |
| 14 | complement(3446394..3448091) | PHAGE_Bacill_phIS3501: terminase large subunit; CBF_3262; phage(gi422934328) | 5e-178 | Click |
| 15 | complement(3448088..3448561) | PHAGE_Bacill_phi105: hypothetical protein phi105_01; CBF_3263; phage(gi22854994) | 1e-53 | Click |
| 16 | complement(3448819..3449217) | PHAGE_Clostr_PhiS63: gp43; CBF_3264; phage(gi388570669) | 2e-16 | Click |
| 17 | complement(3449292..3449585) | conserved domain protein; CBF_3265 | N/A | Click |
| 18 | complement(3449619..3449960) | hypothetical protein; CBF_3266 | N/A | Click |
| 19 | complement(3449998..3450273) | PHAGE_Clostr_phiSM101: hypothetical protein; CBF_3267; phage(gi110804065) | 5e-09 | Click |
| 20 | complement(3450427..3450972) | PHAGE_Bacill_phIS3501: site-specific phage integrase; CBF_3268; phage(gi422934319) | 1e-52 | Click |
| 21 | complement(3450974..3451207) | conserved hypothetical protein; CBF_3269 | N/A | Click |
| 22 | complement(3451416..3451799) | hypothetical protein; CBF_3270 | N/A | Click |
| 23 | complement(3451792..3451959) | hypothetical protein; CBF_3271 | N/A | Click |
| 24 | complement(3451962..3452105) | hypothetical protein; CBF_3272 | N/A | Click |
| 25 | complement(3452120..3452278) | hypothetical protein; CBF_3273 | N/A | Click |
| 26 | complement(3452369..3453418) | PHAGE_Clostr_phiMMP02: hypothetical protein; CBF_3274; phage(gi414090433) | 2e-42 | Click |
| 27 | complement(3453457..3453603) | hypothetical protein; CBF_3275 | N/A | Click |
| 28 | complement(3453637..3453807) | hypothetical protein; CBF_3276 | N/A | Click |
| 29 | complement(3453840..3454025) | hypothetical protein; CBF_3277 | N/A | Click |
| 30 | complement(3454063..3454335) | conserved domain protein; CBF_3278 | N/A | Click |
| 31 | complement(3454369..3454590) | hypothetical protein; CBF_3279 | N/A | Click |
| 32 | complement(3454626..3454988) | hypothetical protein; CBF_3280 | N/A | Click |
| 33 | complement(3455021..3455395) | PHAGE_Clostr_phiMMP02: DNA-cytosine methyltransferase; CBF_3281; phage(gi414090431) | 1e-20 | Click |
| 34 | complement(3455458..3455883) | PHAGE_Strept_MM1: putative methyltransferase; CBF_3282; phage(gi15088757) | 2e-13 | Click |
| 35 | complement(3456066..3456524) | PHAGE_Lister_A118: putative methyltransferase; CBF_3283; phage(gi16798837) | 4e-64 | Click |
| 36 | complement(3456570..3457313) | PHAGE_Burkho_phiE125: hypothetical protein phiE125p43; CBF_3284; phage(gi17975204) | 1e-09 | Click |
| 37 | complement(3457350..3457637) | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp67; CBF_3285; phage(gi90592703) | 6e-09 | Click |
| 38 | complement(3457628..3458143) | hypothetical protein; CBF_3286 | N/A | Click |
| 39 | complement(3458146..3458688) | hypothetical protein; CBF_3287 | N/A | Click |
| 40 | complement(3458689..3459525) | PHAGE_Brocho_BL3: gp46; CBF_3288; phage(gi327409438) | 6e-53 | Click |
| 41 | complement(3459635..3459856) | PHAGE_Clostr_phi3626: Gp29 protein; CBF_3289; phage(gi20065992) | 7e-06 | Click |
| 42 | complement(3459872..3460054) | conserved hypothetical protein; CBF_3290 | N/A | Click |
| 43 | 3460118..3460324 | PHAGE_Entero_phiFL3A: hypothetical protein; CBF_3291; phage(gi281416224) | 7e-10 | Click |
| 44 | complement(3460368..3460535) | hypothetical protein; CBF_3292 | N/A | Click |
| 45 | 3460607..3460620 | attR TTATTTTTTATTCA | N/A | Click |
| 46 | complement(3460633..3461391) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p79; CBF_3293; phage(gi134287411) | 2e-38 | Click |
| 47 | complement(3461448..3461591) | hypothetical protein; CBF_3294 | N/A | Click |
| 48 | complement(3461594..3461743) | hypothetical protein; CBF_3295 | N/A | Click |
| 49 | complement(3461724..3461957) | DNA-binding protein; CBF_3296 | N/A | Click |
| 50 | 3462167..3462532 | PHAGE_Lactob_KC5a: putative transcriptional regulator; CBF_3297; phage(gi90592588) | 2e-10 | Click |