Definition Yersinia pestis D106004, complete genome.
Accession CP001585
Length 4,640,720
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2359862..2359892  attL    ATATTGAATAAGCCGAGTTGGGCTAAATAAC  N/A  Click
2 complement(2359918..2361156)  PHAGE_Salmon_1: putative bacteriophage integrase; YPD4_1841; phage(gi169257156)  1e-125  Click
3 2361226..2362248  PROPHAGE_Escher_CFT073: transposase; YPD4_1842; phage(gi26248360)  0.0  Click
4 2362248..2363027  PROPHAGE_Escher_CFT073: transposase/IS protein; YPD4_1843; phage(gi26248359)  1e-142  Click
5 complement(2363755..2364453)  PHAGE_Pseudo_F116: DNA adenine methyltransferase; YPD4_1844; phage(gi56692911)  3e-53  Click
6 2364480..2364926  PHAGE_Cronob_ENT47670: putative ninB protein; YPD4_1845; phage(gi431810524)  5e-47  Click
7 2365000..2365707  PHAGE_Entero_mEp213: NinG protein; YPD4_1846; phage(gi428782653)  6e-43  Click
8 2366265..2366828  PHAGE_Salmon_SPN3UB: hypothetical protein; YPD4_1847; phage(gi423262398)  1e-29  Click
9 2368207..2368719  PHAGE_Cronob_phiES15: putative endolysin; YPD4_1848; phage(gi401817587)  2e-51  Click
10 2368704..2369162  PHAGE_Entero_cdtI: lysin; YPD4_1849; phage(gi148609441)  2e-24  Click
11 2369708..2370421  PHAGE_Cronob_ENT47670: phage antirepressor protein; YPD4_1850; phage(gi431810509)  6e-50  Click
12 2370878..2371513  PHAGE_Pectob_ZF40: putative transposase; YPD4_1851; phage(gi422936679)  3e-87  Click
13 2371544..2371993  PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; YPD4_1852; phage(gi399528759)  4e-51  Click
14 2372243..2372581  PHAGE_Cronob_phiES15: terminase large subunit; YPD4_1853; phage(gi401817592)  6e-33  Click
15 2372629..2373837  PROPHAGE_Escher_CFT073: transposase; YPD4_1854; phage(gi26246249)  0.0  Click
16 2373842..2374816  PHAGE_Cronob_phiES15: terminase large subunit; YPD4_1855; phage(gi401817592)  5e-144  Click
17 2374816..2375544  PHAGE_Burkho_KL1: portal protein; YPD4_1856; phage(gi399528722)  2e-35  Click
18 2375563..2376204  PHAGE_Burkho_KL1: portal protein; YPD4_1857; phage(gi399528722)  1e-34  Click
19 2376205..2377317  PHAGE_Cronob_phiES15: hypothetical protein; YPD4_1858; phage(gi401817594)  3e-123  Click
20 2377439..2378212  PHAGE_Xantho_Xp15: putative phage structural protein; YPD4_1859; phage(gi66392059)  1e-19  Click
21 2378226..2379431  PHAGE_Acinet_Bphi_B1251: major capsid protein; YPD4_1860; phage(gi423262007)  1e-113  Click
22 2379479..2379961  PHAGE_Cronob_phiES15: hypothetical protein; YPD4_1861; phage(gi401817598)  2e-23  Click
23 2380214..2380564  PHAGE_Cronob_phiES15: putative structural protein 2; YPD4_1862; phage(gi401817599)  5e-33  Click
24 2380566..2381150  PHAGE_Shigel_EP23: putative tail protein; YPD4_1863; phage(gi371496282)  2e-27  Click
25 2381147..2381554  PHAGE_Cronob_phiES15: hypothetical protein; YPD4_1864; phage(gi401817601)  1e-16  Click
26 2381620..2382540  PHAGE_Cronob_phiES15: putative major tail protein; YPD4_1865; phage(gi401817602)  3e-75  Click
27 2382553..2382864  PHAGE_Cronob_phiES15: hypothetical protein; YPD4_1866; phage(gi401817603)  9e-32  Click
28 2383173..2386676  PHAGE_Entero_mEp213: tail length tape measure protein; YPD4_1867; phage(gi428782602)  5e-152  Click
29 2386679..2387020  PHAGE_Cronob_phiES15: putative minor tail protein; YPD4_1868; phage(gi401817607)  2e-31  Click
30 2387274..2387783  PROPHAGE_Salmon_Ty2: transposase; YPD4_1869; phage(gi29143766)  6e-84  Click
31 2387904..2388656  PHAGE_Entero_HK225: minor tail protein; YPD4_1870; phage(gi428782393)  3e-101  Click
32 2388659..2389369  PHAGE_Entero_HK140: minor tail protein K; YPD4_1871; phage(gi428781957)  8e-109  Click
33 2389630..2390262  hypothetical protein; YPD4_1872  N/A  Click
34 2391137..2392144  PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; YPD4_1873; phage(gi31544021)  4e-37  Click
35 2394400..2397603  PHAGE_Cronob_phiES15: putative host specificity protein; YPD4_1874; phage(gi401817611)  0.0  Click
36 2397588..2398601  PHAGE_Cronob_phiES15: hypothetical protein; YPD4_1875; phage(gi401817612)  7e-25  Click
37 2398618..2399535  PHAGE_Salmon_SSU5: putative phage tail fiber protein; YPD4_1876; phage(gi410491431)  2e-09  Click
38 2399546..2399965  PHAGE_Bacter_2: tail fiber; YPD4_1877; phage(gi212499733)  2e-10  Click
39 complement(2400186..2401394)  PROPHAGE_Escher_CFT073: transposase; YPD4_1878; phage(gi26246249)  0.0  Click
40 2401585..2401615  attR    ATATTGAATAAGCCGAGTTGGGCTAAATAAC  N/A  Click
41 complement(2401699..2402871)  hypothetical protein; YPD4_1879  N/A  Click
42 complement(2402875..2404074)  PHAGE_Africa_virus: NifS-like protein; YPD4_1880; phage(gi9628230)  4e-08  Click