| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S, complete genome. |
|---|---|
| Accession | CP001363 |
| Length | 4,870,265 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 6 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 613917..613929 | attL TGATTCGCCAGAC | N/A | Click |
| 2 | complement(614287..614475) | PHAGE_Salmon_SPN9CC: integrase; STM14_0647; phage(gi389060492) | 1e-12 | Click |
| 3 | 615283..615441 | PHAGE_Salmon_SFP10: phage tailspike protein; STM14_0649; phage(gi351518605) | 5e-14 | Click |
| 4 | complement(615498..617150) | PHAGE_Salmon_epsilon34: GtrC; putative membrane protein; STM14_0650; phage(gi221328637) | 9e-93 | Click |
| 5 | complement(617131..618057) | PHAGE_Salmon_SPN9CC: O-antigen conversion protein; STM14_0651; phage(gi389060490) | 7e-172 | Click |
| 6 | complement(618054..618416) | PHAGE_Salmon_SPN9CC: bactoprenol-linked glucose translocase; STM14_0652; phage(gi389060491) | 9e-66 | Click |
| 7 | 618678..618750 | tRNA | N/A | Click |
| 8 | complement(619284..619613) | PHAGE_Ectoca_1: EsV-1-186; STM14_0655; phage(gi13242656) | 8e-07 | Click |
| 9 | 620558..620570 | attR TGATTCGCCAGAC | N/A | Click |
Region 2, total : 13 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 962256..962269 | attL TTTCCGCCAGCTCA | N/A | Click |
| 2 | 974189..975847 | PHAGE_Entero_P2: Old; STM14_1056; phage(gi9630369) | 8e-06 | Click |
| 3 | complement(975844..976812) | VirK-like protein; STM14_1057 | N/A | Click |
| 4 | 976940..978058 | PHAGE_Cronob_ENT47670: putative tail protein; STM14_1058; phage(gi431810494) | 4e-05 | Click |
| 5 | 978055..980001 | PHAGE_Plankt_PaV_LD: ABC transporter; STM14_1059; phage(gi371496158) | 5e-41 | Click |
| 6 | complement(980013..980138) | hypothetical protein; STM14_1060 | N/A | Click |
| 7 | 980033..980176 | hypothetical protein; STM14_1061 | N/A | Click |
| 8 | complement(980131..980352) | PHAGE_Lactoc_bIL312: Csp; STM14_1062; phage(gi13095918) | 5e-14 | Click |
| 9 | 980676..980996 | PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; STM14_1063; phage(gi414087232) | 3e-05 | Click |
| 10 | 981027..983303 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; STM14_1064; phage(gi15800640) | 0.0 | Click |
| 11 | 983350..983538 | hypothetical protein; STM14_1065 | N/A | Click |
| 12 | 983495..983953 | PHAGE_Hypert_2: IS element Dka2 orfA; STM14_1066; phage(gi300116744) | 4e-16 | Click |
| 13 | complement(984062..984343) | hypothetical protein; STM14_1067 | N/A | Click |
| 14 | complement(984416..985099) | PROPHAGE_Escher_CFT073: transposase insF; STM14_1068; phage(gi26249410) | 1e-31 | Click |
| 15 | 992411..992424 | attR TTTCCGCCAGCTCA | N/A | Click |
Region 3, total : 58 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1056538..1056552 | attL TTATAAAAATGTAGC | N/A | Click |
| 2 | complement(1056587..1057879) | PHAGE_Gifsy_2: bacteriophage integrase; STM14_1140; phage(gi169257268) | 0.0 | Click |
| 3 | complement(1057924..1058172) | PHAGE_Gifsy_2: bacteriophage excisionase; STM14_1141; phage(gi169257269) | 1e-43 | Click |
| 4 | complement(1058213..1058452) | PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; STM14_1142; phage(gi169257270) | 7e-40 | Click |
| 5 | complement(1058495..1059604) | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM14_1143; phage(gi169257271) | 0.0 | Click |
| 6 | complement(1059615..1062500) | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; STM14_1144; phage(gi169257272) | 0.0 | Click |
| 7 | complement(1062627..1062926) | PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; STM14_1145; phage(gi169257273) | 3e-40 | Click |
| 8 | complement(1062948..1063106) | PHAGE_Gifsy_2: hypothetical protein STM1010.1n.Gifsy2; STM14_1146; phage(gi169257274) | 1e-25 | Click |
| 9 | complement(1063099..1063359) | PHAGE_Gifsy_2: hypothetical protein STM1010.2n.Gifsy2; STM14_1147; phage(gi169257275) | 2e-15 | Click |
| 10 | complement(1063409..1063819) | PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STM14_1148; phage(gi169257276) | 6e-74 | Click |
| 11 | 1063939..1064178 | PHAGE_Gifsy_2: putative bacteriophage regulatory protein; Lambda gpCro analog; STM14_1149; phage(gi169257277) | 4e-42 | Click |
| 12 | 1064144..1064518 | PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; STM14_1150; phage(gi169257278) | 1e-54 | Click |
| 13 | 1064603..1065586 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; STM14_1151; phage(gi169257279) | 0.0 | Click |
| 14 | 1065589..1066338 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; STM14_1152; phage(gi169257280) | 4e-141 | Click |
| 15 | 1066349..1066696 | PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; STM14_1153; phage(gi169257281) | 5e-60 | Click |
| 16 | 1066693..1067004 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM14_1154; phage(gi169257282) | 7e-53 | Click |
| 17 | 1067082..1067372 | PHAGE_Gifsy_2: hypothetical protein STM1019.1n.Gifsy2; STM14_1155; phage(gi169257283) | 8e-47 | Click |
| 18 | 1067664..1067897 | PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; STM14_1156; phage(gi169257284) | 8e-39 | Click |
| 19 | 1068009..1068230 | PHAGE_Gifsy_2: hypothetical bacteriophage protein; STM14_1157; phage(gi169257285) | 3e-35 | Click |
| 20 | 1068313..1068915 | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; STM14_1158; phage(gi169257286) | 3e-111 | Click |
| 21 | 1068921..1069121 | PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; STM14_1159; phage(gi169257287) | 1e-35 | Click |
| 22 | 1069124..1069735 | PHAGE_Gifsy_2: NinG; STM14_1160; phage(gi169257288) | 1e-116 | Click |
| 23 | 1069732..1069878 | PHAGE_Gifsy_2: hypothetical protein STM1022.1n.Gifsy2; STM14_1161; phage(gi169257289) | 5e-22 | Click |
| 24 | 1069868..1070665 | PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; STM14_1162; phage(gi169257290) | 7e-155 | Click |
| 25 | 1070732..1071049 | PHAGE_Gifsy_2: hypothetical protein STM1023.Gifsy2; STM14_1163; phage(gi169257291) | 1e-58 | Click |
| 26 | 1071223..1071348 | PHAGE_Gifsy_2: hypothetical protein STM1024.Gifsy2; STM14_1164; phage(gi169257292) | 1e-17 | Click |
| 27 | complement(1071484..1071933) | PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; STM14_1165; phage(gi169257293) | 6e-84 | Click |
| 28 | complement(1072294..1072980) | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; STM14_1166; phage(gi169257294) | 2e-134 | Click |
| 29 | 1073337..1073585 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; STM14_1167; phage(gi169257295) | 5e-41 | Click |
| 30 | 1073569..1074021 | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; STM14_1168; phage(gi169257296) | 2e-83 | Click |
| 31 | 1074039..1074518 | PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; STM14_1169; phage(gi169257297) | 1e-86 | Click |
| 32 | 1074726..1075259 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; STM14_1170; phage(gi169257298) | 1e-95 | Click |
| 33 | 1075216..1077354 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, large subunit; STM14_1171; phage(gi169257299) | 0.0 | Click |
| 34 | 1077554..1079101 | PHAGE_Gifsy_2: bacteriophage portal protein; STM14_1172; phage(gi169257301) | 0.0 | Click |
| 35 | 1079025..1081106 | PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; STM14_1173; phage(gi169257302) | 0.0 | Click |
| 36 | 1081197..1081520 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM14_1174; phage(gi169257303) | 3e-55 | Click |
| 37 | 1081513..1081812 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; STM14_1175; phage(gi169257304) | 6e-52 | Click |
| 38 | 1081793..1082359 | PHAGE_Gifsy_2: bacteriophage morphogenesis protein; Lambda gpZ homolog; STM14_1176; phage(gi169257305) | 3e-103 | Click |
| 39 | 1082356..1082757 | PHAGE_Gifsy_2: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM14_1177; phage(gi169257306) | 3e-72 | Click |
| 40 | 1082769..1083518 | PHAGE_Gifsy_2: bacteriophage major tail protein; Lambda gpV homolog; STM14_1178; phage(gi169257307) | 2e-141 | Click |
| 41 | 1083564..1083962 | PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM14_1179; phage(gi169257308) | 8e-70 | Click |
| 42 | 1083959..1084288 | PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; STM14_1180; phage(gi169257309) | 6e-57 | Click |
| 43 | 1084368..1087355 | PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM14_1181; phage(gi169257310) | 0.0 | Click |
| 44 | 1087352..1087684 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM14_1182; phage(gi169257311) | 2e-61 | Click |
| 45 | 1087783..1088280 | PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; STM14_1183; phage(gi169257312) | 3e-93 | Click |
| 46 | complement(1088397..1088930) | PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; STM14_1184; phage(gi169257313) | 3e-102 | Click |
| 47 | 1089020..1089715 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM14_1185; phage(gi169257314) | 1e-135 | Click |
| 48 | 1089725..1090462 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; STM14_1186; phage(gi169257315) | 3e-152 | Click |
| 49 | 1090360..1091064 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM14_1187; phage(gi169257316) | 5e-129 | Click |
| 50 | 1091136..1094486 | PHAGE_Gifsy_2: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; STM14_1188; phage(gi169257317) | 0.0 | Click |
| 51 | 1094525..1094767 | PHAGE_Gifsy_2: hypothetical protein STM1049.2n.Gifsy2; STM14_1189; phage(gi169257319) | 3e-40 | Click |
| 52 | 1094821..1097259 | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STM14_1190; phage(gi169257320) | 0.0 | Click |
| 53 | 1097259..1097840 | PHAGE_Gifsy_2: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STM14_1191; phage(gi169257321) | 3e-111 | Click |
| 54 | complement(1097844..1097951) | PHAGE_Salmon_RE_2010: tail fiber protein; STM14_1192; phage(gi418489717) | 1e-11 | Click |
| 55 | 1098316..1099284 | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; STM14_1193; phage(gi169257322) | 0.0 | Click |
| 56 | complement(1099932..1100558) | PHAGE_Pseudo_F116: hypothetical protein F116p67; STM14_1195; phage(gi56692976) | 7e-31 | Click |
| 57 | complement(1100627..1100926) | hypothetical protein; STM14_1196 | N/A | Click |
| 58 | complement(1100911..1101597) | hypothetical protein; STM14_1197 | N/A | Click |
| 59 | complement(1101868..1102059) | PHAGE_Entero_mEp390: DinI-like family protein; STM14_1198; phage(gi428782688) | 6e-25 | Click |
| 60 | 1102365..1102379 | attR TTATAAAAATGTAGC | N/A | Click |
Region 4, total : 68 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1282096..1282425) | PHAGE_Aeromo_CC2: hypothetical protein; STM14_1414; phage(gi423261545) | 9e-08 | Click |
| 2 | complement(1282422..1283087) | putative ribosomal large subunit pseudouridine synthase; STM14_1415 | N/A | Click |
| 3 | 1283259..1284509 | isocitrate dehydrogenase; STM14_1416 | N/A | Click |
| 4 | 1284574..1284587 | attL TCTTCCCCAAAACT | N/A | Click |
| 5 | complement(1284622..1285764) | PHAGE_Entero_mEp235: integrase; STM14_1417; phage(gi428781836) | 6e-62 | Click |
| 6 | complement(1285754..1285990) | excisionase; STM14_1418 | N/A | Click |
| 7 | complement(1286040..1286591) | PHAGE_Salmon_SPN9CC: Eaa protein; STM14_1419; phage(gi389060494) | 6e-12 | Click |
| 8 | complement(1286588..1286920) | PHAGE_Salmon_ST64B: hypothetical protein sb32; STM14_1420; phage(gi23505476) | 4e-20 | Click |
| 9 | complement(1286913..1287239) | PHAGE_Entero_mEp213: hypothetical protein; STM14_1421; phage(gi428782634) | 7e-21 | Click |
| 10 | complement(1287269..1288099) | PHAGE_Entero_epsilon15: RecT; STM14_1422; phage(gi30387413) | 2e-81 | Click |
| 11 | complement(1288092..1290446) | PHAGE_Erwini_phiEt88: exodeoxyribonuclease; STM14_1423; phage(gi327198600) | 9e-86 | Click |
| 12 | complement(1290505..1290804) | PHAGE_Gifsy_1: bacteriophage exodeoxyribonuclease VIII-like protein; STM14_1424; phage(gi169257262) | 2e-19 | Click |
| 13 | complement(1290945..1291115) | PHAGE_Gifsy_1: hypothetical protein STM2630.Gifsy1; STM14_1425; phage(gi169257260) | 5e-12 | Click |
| 14 | complement(1291108..1291224) | PHAGE_Gifsy_1: hypothetical protein STM2630.1n.Gifsy1; STM14_1426; phage(gi169257259) | 2e-14 | Click |
| 15 | 1291515..1291721 | PHAGE_Entero_HK225: hypothetical protein; STM14_1427; phage(gi428782417) | 1e-19 | Click |
| 16 | complement(1291829..1292914) | PHAGE_Pseudo_phi297: putative ParA protein; STM14_1428; phage(gi374531271) | 5e-62 | Click |
| 17 | complement(1293066..1293533) | PHAGE_Entero_mEp237: prophage repressor; STM14_1429; phage(gi435439304) | 4e-73 | Click |
| 18 | 1293622..1293774 | PHAGE_Gifsy_1: conserved hypothetical prophage protein; putative Cro analog; STM14_1430; phage(gi169257257) | 7e-08 | Click |
| 19 | 1293794..1294114 | PHAGE_Gifsy_1: probable regulatory protein; transcriptional activator; lambda CII analog; STM14_1431; phage(gi169257256) | 1e-54 | Click |
| 20 | 1294206..1295111 | PHAGE_Entero_lambda: DNA replication protein; STM14_1432; phage(gi9626295) | 8e-97 | Click |
| 21 | 1295108..1295800 | PHAGE_Escher_HK639: replication protein 14; STM14_1433; phage(gi356870655) | 4e-81 | Click |
| 22 | 1295815..1296480 | PHAGE_Salmon_epsilon34: EaD-like protein; STM14_1434; phage(gi221328645) | 1e-27 | Click |
| 23 | 1296482..1296952 | PHAGE_Pectob_ZF40: putative methylase; STM14_1435; phage(gi422936660) | 8e-69 | Click |
| 24 | 1296955..1297608 | PHAGE_Entero_P22: EaA; STM14_1436; phage(gi9635497) | 3e-56 | Click |
| 25 | 1297601..1297882 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p54; STM14_1437; phage(gi89152468) | 8e-49 | Click |
| 26 | 1297994..1298185 | PHAGE_Escher_HK639: hypothetical protein; STM14_1438; phage(gi356870631) | 1e-19 | Click |
| 27 | 1298444..1298677 | PHAGE_Gifsy_1: bacteriophage putative DNA damage-inducible protein; DinI homolog; STM14_1439; phage(gi169257250) | 2e-38 | Click |
| 28 | 1298794..1299042 | PHAGE_Entero_mEp237: hypothetical protein; STM14_1440; phage(gi435439314) | 2e-40 | Click |
| 29 | 1299077..1299676 | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM14_1441; phage(gi169257248) | 7e-59 | Click |
| 30 | 1299673..1299867 | PHAGE_Gifsy_1: hypothetical protein STM2620.1n.Gifsy1; STM14_1442; phage(gi169257247) | 3e-13 | Click |
| 31 | 1299849..1300145 | PHAGE_Entero_HK225: hypothetical protein; STM14_1443; phage(gi428782439) | 2e-37 | Click |
| 32 | 1300142..1300696 | PHAGE_Salmon_vB_SosS_Oslo: antitermination protein Q; STM14_1444; phage(gi399528832) | 5e-06 | Click |
| 33 | 1300693..1300881 | conserved hypothetical protein; STM14_1445 | N/A | Click |
| 34 | 1300963..1301523 | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM14_1446; phage(gi169257243) | 7e-47 | Click |
| 35 | 1301766..1301954 | PHAGE_Gifsy_1: hypothetical protein STM2615.1n.Gifsy1; STM14_1447; phage(gi169257242) | 1e-25 | Click |
| 36 | 1302108..1302326 | hypothetical protein; STM14_1448 | N/A | Click |
| 37 | complement(1302338..1302877) | conserved hypothetical protein; STM14_1449 | N/A | Click |
| 38 | 1303055..1303357 | PHAGE_Bacter_2: phage 21-like group II holin; STM14_1450; phage(gi212499716) | 1e-05 | Click |
| 39 | 1303335..1303874 | PHAGE_Entero_mEp460: endolysin; STM14_1451; phage(gi428782372) | 5e-77 | Click |
| 40 | 1304044..1304181 | putative bacteriophage protein; STM14_1452 | N/A | Click |
| 41 | 1304183..1304647 | PHAGE_Gifsy_1: bacteriophage lysis protein; Rz; STM14_1453; phage(gi169257238) | 3e-62 | Click |
| 42 | complement(1304874..1305275) | PHAGE_Gifsy_1: hypothetical protein STM2610.Gifsy1; STM14_1454; phage(gi169257237) | 1e-70 | Click |
| 43 | 1305561..1306106 | PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STM14_1455; phage(gi169257236) | 2e-87 | Click |
| 44 | 1306078..1308009 | PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STM14_1456; phage(gi169257235) | 0.0 | Click |
| 45 | 1307993..1308196 | PHAGE_Gifsy_1: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STM14_1457; phage(gi169257234) | 2e-31 | Click |
| 46 | 1308154..1309773 | PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; STM14_1458; phage(gi169257233) | 0.0 | Click |
| 47 | 1309763..1311259 | PHAGE_Gifsy_1: bacteriophage prohead protease; Lambda gpC homolog; STM14_1459; phage(gi169257232) | 0.0 | Click |
| 48 | 1311272..1311619 | PHAGE_Gifsy_1: bacteriophage head decoration protein; Lambda gpD homolog; STM14_1460; phage(gi169257231) | 2e-61 | Click |
| 49 | 1311674..1312702 | PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; STM14_1461; phage(gi169257230) | 0.0 | Click |
| 50 | 1313114..1313518 | PHAGE_Gifsy_1: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STM14_1463; phage(gi169257228) | 1e-68 | Click |
| 51 | 1313546..1314124 | PHAGE_Gifsy_1: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STM14_1464; phage(gi169257227) | 7e-104 | Click |
| 52 | complement(1314173..1315423) | PHAGE_Gifsy_1: transposase; STM14_1465; phage(gi169257226) | 0.0 | Click |
| 53 | 1315412..1315813 | PHAGE_Gifsy_1: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM14_1466; phage(gi169257225) | 2e-73 | Click |
| 54 | 1315824..1316567 | PHAGE_Gifsy_1: bacteriophage major tail subunit; Lambda gpV homolog; STM14_1467; phage(gi169257224) | 5e-138 | Click |
| 55 | 1316618..1317013 | PHAGE_Gifsy_1: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM14_1468; phage(gi169257223) | 2e-70 | Click |
| 56 | 1317031..1317348 | PHAGE_Gifsy_1: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STM14_1469; phage(gi169257222) | 8e-57 | Click |
| 57 | 1317320..1320415 | PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM14_1470; phage(gi169257221) | 0.0 | Click |
| 58 | 1320418..1320747 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM14_1471; phage(gi169257220) | 2e-61 | Click |
| 59 | 1320754..1321455 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM14_1472; phage(gi169257219) | 7e-136 | Click |
| 60 | complement(1321447..1322052) | hypothetical protein; STM14_1473 | N/A | Click |
| 61 | 1322136..1322744 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM14_1474; phage(gi169257217) | 5e-113 | Click |
| 62 | 1322806..1326168 | PHAGE_Gifsy_1: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STM14_1475; phage(gi169257216) | 0.0 | Click |
| 63 | 1326207..1326449 | PHAGE_Gifsy_1: hypothetical protein STM2589.1n.Gifsy1; STM14_1476; phage(gi169257215) | 1e-38 | Click |
| 64 | 1326457..1326636 | hypothetical protein; STM14_1477 | N/A | Click |
| 65 | 1326599..1328944 | PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STM14_1478; phage(gi169257214) | 0.0 | Click |
| 66 | 1328944..1329528 | PHAGE_Gifsy_1: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STM14_1479; phage(gi169257212) | 1e-99 | Click |
| 67 | complement(1329626..1329826) | PHAGE_Gifsy_1: PagK-like protein; STM14_1480; phage(gi169257211) | 4e-28 | Click |
| 68 | 1330809..1331156 | PROPHAGE_Shewan_MR-1: ISSod13, transposase; STM14_1481; phage(gi24375047) | 9e-40 | Click |
| 69 | 1332051..1334153 | PHAGE_Gifsy_1: leucine-rich repeat protein; STM14_1483; phage(gi169257209) | 3e-06 | Click |
| 70 | 1335316..1335329 | attR TCTTCCCCAAAACT | N/A | Click |
Region 5, total : 18 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1974584..1974784 | PHAGE_Gifsy_1: PagK-like protein; STM14_2265; phage(gi169257211) | 3e-34 | Click |
| 2 | complement(1974881..1975939) | PHAGE_Salmon_1: putative bacteriophage tail assembly protein; STM14_2266; phage(gi169257205) | 6e-73 | Click |
| 3 | complement(1975917..1976180) | PHAGE_Salmon_1: bacteriophage terminase, small subunit; STM14_2267; phage(gi169257184) | 7e-43 | Click |
| 4 | 1976235..1976423 | hypothetical protein; STM14_2268 | N/A | Click |
| 5 | 1976488..1976655 | lytic enzyme; STM14_2269 | N/A | Click |
| 6 | 1976705..1976878 | hypothetical protein; STM14_2270 | N/A | Click |
| 7 | 1976808..1976927 | hypothetical protein; STM14_2271 | N/A | Click |
| 8 | complement(1976912..1977445) | PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STM14_2272; phage(gi16765210) | 5e-95 | Click |
| 9 | complement(1977499..1977786) | PHAGE_Salmon_1: putative bacteriophage endolysin; STM14_2273; phage(gi169257182) | 7e-30 | Click |
| 10 | 1977760..1978413 | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; STM14_2274; phage(gi169257272) | 3e-17 | Click |
| 11 | complement(1979312..1979440) | hypothetical protein; STM14_2276 | N/A | Click |
| 12 | complement(1979524..1979643) | putative cytoplasmic protein; STM14_2277 | N/A | Click |
| 13 | complement(1979701..1980054) | PHAGE_Entero_PsP3: gp28; STM14_2278; phage(gi41057381) | 4e-08 | Click |
| 14 | complement(1980071..1980946) | putative inner membrane protein; STM14_2279 | N/A | Click |
| 15 | complement(1980947..1981321) | hypothetical protein; STM14_2280 | N/A | Click |
| 16 | 1981459..1981689 | PHAGE_Pectob_ZF40: putative DNA polymerase; STM14_2281; phage(gi422936677) | 6e-17 | Click |
| 17 | 1981797..1982453 | putative amidohydrolase; STM14_2282 | N/A | Click |
| 18 | 1982477..1983175 | PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; STM14_2283; phage(gi414087193) | 2e-15 | Click |
Region 6, total : 66 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2090630..2090842) | PHAGE_Lactoc_bIL312: Csp; STM14_2420; phage(gi13095918) | 1e-16 | Click |
| 2 | complement(2091089..2091208) | hypothetical protein; STM14_2421 | N/A | Click |
| 3 | complement(2091297..2092565) | PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; STM14_2422; phage(gi399528790) | 0.0 | Click |
| 4 | complement(2092568..2092987) | PHAGE_Salmon_vB_SosS_Oslo: errror-prone repair protein UmuD; STM14_2423; phage(gi399528789) | 1e-31 | Click |
| 5 | complement(2093114..2093275) | putative cytoplasmic protein; STM14_2424 | N/A | Click |
| 6 | complement(2093253..2093495) | hypothetical protein; STM14_2425 | N/A | Click |
| 7 | complement(2093578..2093639) | tRNA | N/A | Click |
| 8 | complement(2093906..2094127) | PHAGE_Salmon_ST64B: DNA invertase pin protein; STM14_2427; phage(gi23505471) | 7e-38 | Click |
| 9 | 2094322..2094333 | attL TAGCGTAAGGGT | N/A | Click |
| 10 | 2094340..2095347 | PHAGE_Salmon_ST64B: hypothetical protein sb26; STM14_2428; phage(gi23505470) | 0.0 | Click |
| 11 | complement(2095348..2095497) | PHAGE_Erwini_ENT90: tail sheath protein; STM14_2429; phage(gi431810939) | 2e-05 | Click |
| 12 | complement(2095632..2096201) | PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; STM14_2430; phage(gi23505469) | 2e-109 | Click |
| 13 | complement(2096201..2097763) | PHAGE_Salmon_ST64B: tail protein; STM14_2431; phage(gi23505468) | 0.0 | Click |
| 14 | complement(2097750..2098337) | PHAGE_Salmon_ST64B: putative tail protein; STM14_2432; phage(gi23505467) | 2e-115 | Click |
| 15 | complement(2099413..2099826) | PHAGE_Salmon_ST64B: putative tail protein; STM14_2434; phage(gi23505464) | 2e-77 | Click |
| 16 | complement(2099831..2100364) | PHAGE_Salmon_ST64B: putative base plate assembly protein; STM14_2435; phage(gi23505463) | 3e-99 | Click |
| 17 | complement(2100364..2101422) | PHAGE_Salmon_ST64B: Tail protein; STM14_2436; phage(gi23505462) | 0.0 | Click |
| 18 | complement(2101419..2102759) | PHAGE_Salmon_ST64B: tail/DNA circulation protein; STM14_2437; phage(gi23505461) | 0.0 | Click |
| 19 | complement(2102793..2104721) | PHAGE_Salmon_ST64B: tail protein; STM14_2438; phage(gi23505460) | 0.0 | Click |
| 20 | complement(2104733..2105140) | PHAGE_Salmon_ST64B: hypothetical protein sb15; STM14_2439; phage(gi23505501) | 8e-45 | Click |
| 21 | complement(2105128..2105484) | PHAGE_Salmon_ST64B: Tail tube protein; STM14_2440; phage(gi23505459) | 8e-65 | Click |
| 22 | complement(2105484..2106980) | PHAGE_Salmon_ST64B: Tail Sheath protein; STM14_2441; phage(gi23505458) | 0.0 | Click |
| 23 | complement(2106970..2107134) | PHAGE_Salmon_ST64B: hypothetical protein sb12; STM14_2442; phage(gi23505457) | 9e-27 | Click |
| 24 | complement(2107138..2107698) | PHAGE_Salmon_ST64B: hypothetical protein sb11; STM14_2443; phage(gi23505456) | 3e-107 | Click |
| 25 | complement(2107695..2108207) | PHAGE_Salmon_ST64B: hypothetical protein sb10; STM14_2444; phage(gi23505455) | 3e-97 | Click |
| 26 | complement(2108179..2108583) | PHAGE_Salmon_ST64B: hypothetical protein sb9; STM14_2445; phage(gi23505454) | 8e-74 | Click |
| 27 | complement(2108580..2108903) | PHAGE_Salmon_ST64B: hypothetical protein sb8; STM14_2446; phage(gi23505453) | 5e-57 | Click |
| 28 | complement(2108906..2109106) | PHAGE_Salmon_ST64B: hypothetical protein sb7; STM14_2447; phage(gi23505452) | 2e-31 | Click |
| 29 | complement(2109157..2110362) | PHAGE_Salmon_ST64B: Major capsid protein precursor; STM14_2448; phage(gi23505451) | 0.0 | Click |
| 30 | complement(2110377..2111063) | PHAGE_Salmon_ST64B: Pro-head protease; STM14_2449; phage(gi23505450) | 3e-127 | Click |
| 31 | complement(2111005..2112249) | PHAGE_Salmon_ST64B: Portal Protein; STM14_2450; phage(gi23505449) | 0.0 | Click |
| 32 | complement(2112246..2112428) | PHAGE_Salmon_ST64B: putative integral membrane protein; STM14_2451; phage(gi23505448) | 1e-29 | Click |
| 33 | complement(2112440..2114173) | PHAGE_Salmon_ST64B: Terminase large subunit; STM14_2452; phage(gi23505447) | 0.0 | Click |
| 34 | complement(2114170..2114664) | PHAGE_Salmon_ST64B: terminase small subunit; STM14_2453; phage(gi23505446) | 9e-93 | Click |
| 35 | complement(2114790..2115140) | PHAGE_Salmon_ST64B: hypothetical protein sb56; STM14_2454; phage(gi23505500) | 3e-68 | Click |
| 36 | complement(2115201..2115503) | PHAGE_Salmon_ST64B: hypothetical protein sb55; STM14_2455; phage(gi23505499) | 2e-53 | Click |
| 37 | complement(2115612..2115710) | PHAGE_Salmon_SE1: hypothetical protein SE1_gp47; STM14_2456; phage(gi219681238) | 7e-11 | Click |
| 38 | complement(2115723..2116142) | PHAGE_Salmon_ST64B: hypothetical protein sb54; STM14_2457; phage(gi23505498) | 1e-73 | Click |
| 39 | complement(2116355..2116840) | PHAGE_Salmon_ST64B: lysis protein; STM14_2458; phage(gi23505497) | 2e-86 | Click |
| 40 | complement(2116837..2117451) | PHAGE_Salmon_ST64B: lytic enzyme (putative glycohydrolase); STM14_2459; phage(gi23505496) | 2e-116 | Click |
| 41 | complement(2117454..2117798) | PHAGE_Salmon_ST64B: lysis protein (holin); STM14_2460; phage(gi23505495) | 5e-46 | Click |
| 42 | 2117839..2117967 | hypothetical protein; STM14_2461 | N/A | Click |
| 43 | complement(2118324..2118683) | PHAGE_Salmon_ST64B: hypothetical protein sb50; STM14_2462; phage(gi23505494) | 4e-67 | Click |
| 44 | complement(2118714..2119337) | PHAGE_Salmon_ST64B: hypothetical protein sb49; STM14_2463; phage(gi23505493) | 3e-120 | Click |
| 45 | complement(2119348..2120301) | PHAGE_Salmon_ST64B: hypothetical protein sb47; STM14_2464; phage(gi23505491) | 2e-134 | Click |
| 46 | complement(2120345..2121205) | PHAGE_Salmon_ST64B: hypothetical protein sb46; STM14_2465; phage(gi23505490) | 8e-165 | Click |
| 47 | complement(2121222..2121611) | PHAGE_Salmon_ST64B: holiday-junction resolvase; STM14_2466; phage(gi23505489) | 1e-71 | Click |
| 48 | complement(2121608..2122501) | PHAGE_Salmon_ST64B: putative DNA methyltransferase; STM14_2467; phage(gi23505488) | 3e-175 | Click |
| 49 | complement(2122501..2123025) | PHAGE_Salmon_ST64B: putative transcriptional activator; STM14_2468; phage(gi23505487) | 2e-98 | Click |
| 50 | complement(2122985..2123803) | PHAGE_Salmon_ST64B: putative replication protein; STM14_2469; phage(gi23505486) | 5e-158 | Click |
| 51 | complement(2123800..2124024) | PHAGE_Entero_mEp460: hypothetical protein; STM14_2470; phage(gi428782358) | 1e-35 | Click |
| 52 | complement(2124021..2125178) | PHAGE_Salmon_ST64B: putative antirepressor; STM14_2471; phage(gi23505485) | 0.0 | Click |
| 53 | complement(2125175..2125729) | PHAGE_Salmon_ST64B: hypothetical protein sb40; STM14_2472; phage(gi23505484) | 4e-47 | Click |
| 54 | complement(2125758..2125982) | PHAGE_Salmon_ST64B: DNA binding protein; STM14_2473; phage(gi23505483) | 2e-36 | Click |
| 55 | 2126080..2126775 | PHAGE_Salmon_ST64B: regulatory protein; STM14_2474; phage(gi23505482) | 4e-129 | Click |
| 56 | 2127297..2127308 | attL TCCTCTGTAGTT | N/A | Click |
| 57 | 2127428..2127961 | PHAGE_Salmon_ST64B: hypothetical protein sb37; STM14_2475; phage(gi23505481) | 4e-66 | Click |
| 58 | 2128019..2128846 | PHAGE_Salmon_ST64B: hypothetical protein sb36; STM14_2476; phage(gi23505480) | 2e-154 | Click |
| 59 | 2128983..2129522 | PHAGE_Salmon_ST64B: hypothetical protein sb35; STM14_2477; phage(gi23505479) | 7e-100 | Click |
| 60 | 2129593..2129823 | PHAGE_Salmon_ST64B: hypothetical protein sb34; STM14_2478; phage(gi23505478) | 4e-37 | Click |
| 61 | 2129820..2130335 | PHAGE_Salmon_ST64B: hypothetical protein sb33; STM14_2479; phage(gi23505477) | 5e-98 | Click |
| 62 | 2130332..2130949 | PHAGE_Salmon_ST64B: hypothetical protein sb32; STM14_2480; phage(gi23505476) | 2e-116 | Click |
| 63 | 2130946..2131779 | PHAGE_Salmon_ST64B: hypothetical protein sb31; STM14_2481; phage(gi23505475) | 6e-164 | Click |
| 64 | 2131783..2132352 | PHAGE_Salmon_ST64B: Endodeoxyribonuclease; STM14_2482; phage(gi23505474) | 8e-110 | Click |
| 65 | 2132377..2132619 | PHAGE_Salmon_ST64B: hypothetical protein sb29; STM14_2483; phage(gi23505473) | 2e-41 | Click |
| 66 | 2132621..2133610 | PHAGE_Salmon_ST64B: Integrase protein; STM14_2484; phage(gi23505472) | 0.0 | Click |
| 67 | complement(2133724..2133813) | tRNA | N/A | Click |
| 68 | 2133902..2134699 | putative inner membrane protein; STM14_2485 | N/A | Click |
| 69 | 2134800..2134875 | tRNA | N/A | Click |
| 70 | 2135770..2135845 | tRNA | N/A | Click |
| 71 | 2135770..2135781 | attR TCCTCTGTAGTT | N/A | Click |
| 72 | 2136009..2136482 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; STM14_2489; phage(gi89152430) | 5e-45 | Click |
| 73 | 2136957..2137655 | PROPHAGE_Salmon_LT2: integrase; STM14_2490; phage(gi16766072) | 2e-39 | Click |
| 74 | 2144387..2144398 | attR TAGCGTAAGGGT | N/A | Click |
Region 7, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2382514..2382984) | PHAGE_Entero_P1: HumD; STM14_2756; phage(gi46401723) | 6e-51 | Click |
| 2 | 2383045..2383335 | PHAGE_Klebsi_phiKO2: Gp22; STM14_2757; phage(gi46402108) | 1e-25 | Click |
| 3 | 2383683..2385512 | PHAGE_Salmon_c341: O-polysaccharide acetyltransferase protein; STM14_2758; phage(gi255252697) | 5e-68 | Click |
| 4 | complement(2385566..2386009) | PHAGE_Entero_mEp213: tail fiber assembly protein; STM14_2759; phage(gi428782612) | 5e-15 | Click |
| 5 | complement(2386387..2386914) | PHAGE_Sodali_phiSG1: putative phage tail fiber assembly protein; STM14_2760; phage(gi89886004) | 1e-13 | Click |
| 6 | complement(2386917..2388158) | PHAGE_Entero_SfV: hypothetical protein SfVp21; STM14_2761; phage(gi19548989) | 2e-20 | Click |
| 7 | complement(2388219..2388737) | PHAGE_Entero_SfV: capsid protease; STM14_2762; phage(gi19548994) | 7e-76 | Click |
| 8 | complement(2388751..2389080) | PHAGE_Entero_SfV: holin; STM14_2763; phage(gi19549036) | 9e-38 | Click |
| 9 | complement(2389094..2389207) | hypothetical protein; STM14_2764 | N/A | Click |
| 10 | 2389377..2390708 | hypothetical protein; STM14_2765 | N/A | Click |
| 11 | complement(2390737..2391105) | PHAGE_Entero_cdtI: antitermination protein Q; STM14_2766; phage(gi148609434) | 6e-54 | Click |
| 12 | complement(2391120..2392109) | PHAGE_Entero_SfV: hypothetical protein SfVp45; STM14_2767; phage(gi19549032) | 1e-159 | Click |
| 13 | complement(2392117..2392347) | PHAGE_Entero_SfV: hypothetical protein SfVp44; STM14_2768; phage(gi19549031) | 4e-35 | Click |
| 14 | complement(2392438..2394804) | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; STM14_2769; phage(gi169257322) | 1e-73 | Click |
| 15 | complement(2394973..2395176) | putative phage tail fiber protein; STM14_2770 | N/A | Click |
| 16 | complement(2395473..2396264) | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STM14_2771; phage(gi169257320) | 3e-72 | Click |
| 17 | 2396453..2396770 | PHAGE_Entero_HK225: DNA damage-inducible protein; STM14_2772; phage(gi428782403) | 9e-05 | Click |
Region 8, total : 63 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2780529..2782022 | PHAGE_Gifsy_1: leucine-rich repeat protein; STM14_3164; phage(gi169257209) | 0.0 | Click |
| 2 | complement(2782226..2782354) | hypothetical protein; STM14_3165 | N/A | Click |
| 3 | 2782885..2783430 | PHAGE_Gifsy_1: hypothetical protein STM2585.Gifsy1; STM14_3166; phage(gi169257210) | 1e-101 | Click |
| 4 | 2783615..2783626 | attL ACAAAAACCATG | N/A | Click |
| 5 | 2784542..2784769 | PHAGE_Gifsy_1: PagK-like protein; STM14_3167; phage(gi169257211) | 8e-41 | Click |
| 6 | complement(2784866..2785444) | PHAGE_Gifsy_1: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STM14_3168; phage(gi169257212) | 1e-110 | Click |
| 7 | complement(2785434..2786258) | PHAGE_Gifsy_1: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; STM14_3169; phage(gi169257213) | 2e-161 | Click |
| 8 | complement(2786255..2788627) | PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STM14_3170; phage(gi169257214) | 0.0 | Click |
| 9 | complement(2788681..2788917) | PHAGE_Gifsy_1: hypothetical protein STM2589.1n.Gifsy1; STM14_3171; phage(gi169257215) | 6e-39 | Click |
| 10 | complement(2788962..2792324) | PHAGE_Gifsy_1: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STM14_3172; phage(gi169257216) | 0.0 | Click |
| 11 | complement(2792386..2793033) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpI homolog; STM14_3173; phage(gi169257217) | 6e-121 | Click |
| 12 | complement(2792931..2793668) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpK homolog; STM14_3174; phage(gi169257218) | 7e-124 | Click |
| 13 | complement(2793675..2794373) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpL homolog; STM14_3175; phage(gi169257219) | 7e-136 | Click |
| 14 | complement(2794383..2794712) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; STM14_3176; phage(gi169257220) | 2e-61 | Click |
| 15 | complement(2794715..2797810) | PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STM14_3177; phage(gi169257221) | 0.0 | Click |
| 16 | complement(2797782..2798120) | PHAGE_Gifsy_1: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STM14_3178; phage(gi169257222) | 3e-61 | Click |
| 17 | complement(2798117..2798512) | PHAGE_Gifsy_1: bacteriophage tail assembly chaperone; Lambda gpG homolog; STM14_3179; phage(gi169257223) | 2e-70 | Click |
| 18 | complement(2798563..2799309) | PHAGE_Gifsy_1: bacteriophage major tail subunit; Lambda gpV homolog; STM14_3180; phage(gi169257224) | 5e-138 | Click |
| 19 | complement(2799317..2799718) | PHAGE_Gifsy_1: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STM14_3181; phage(gi169257225) | 2e-73 | Click |
| 20 | 2799707..2800957 | PHAGE_Gifsy_1: transposase; STM14_3182; phage(gi169257226) | 0.0 | Click |
| 21 | complement(2801006..2801584) | PHAGE_Gifsy_1: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STM14_3183; phage(gi169257227) | 7e-104 | Click |
| 22 | complement(2801612..2801995) | PHAGE_Gifsy_1: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STM14_3184; phage(gi169257228) | 1e-68 | Click |
| 23 | complement(2802428..2803456) | PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; STM14_3186; phage(gi169257230) | 0.0 | Click |
| 24 | complement(2803511..2803858) | PHAGE_Gifsy_1: bacteriophage head decoration protein; Lambda gpD homolog; STM14_3187; phage(gi169257231) | 2e-61 | Click |
| 25 | complement(2803871..2805367) | PHAGE_Gifsy_1: bacteriophage prohead protease; Lambda gpC homolog; STM14_3188; phage(gi169257232) | 0.0 | Click |
| 26 | complement(2805357..2806937) | PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; STM14_3189; phage(gi169257233) | 0.0 | Click |
| 27 | complement(2806934..2807137) | PHAGE_Gifsy_1: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STM14_3190; phage(gi169257234) | 2e-31 | Click |
| 28 | complement(2807121..2809052) | PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STM14_3191; phage(gi169257235) | 0.0 | Click |
| 29 | complement(2809024..2809569) | PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STM14_3192; phage(gi169257236) | 2e-87 | Click |
| 30 | 2809856..2810257 | PHAGE_Gifsy_1: hypothetical protein STM2610.Gifsy1; STM14_3193; phage(gi169257237) | 9e-72 | Click |
| 31 | complement(2810493..2810966) | PHAGE_Gifsy_1: bacteriophage lysis protein; Rz; STM14_3194; phage(gi169257238) | 6e-80 | Click |
| 32 | complement(2810963..2811415) | PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; STM14_3195; phage(gi169257239) | 2e-82 | Click |
| 33 | complement(2811399..2811728) | PHAGE_Gifsy_1: bacteriophage lysis protein; holin; STM14_3196; phage(gi169257240) | 4e-58 | Click |
| 34 | 2811771..2811908 | hypothetical protein; STM14_3197 | N/A | Click |
| 35 | 2812004..2812690 | PHAGE_Gifsy_1: virulence protein GogA; STM14_3198; phage(gi169257241) | 9e-134 | Click |
| 36 | complement(2812905..2813093) | PHAGE_Gifsy_1: hypothetical protein STM2615.1n.Gifsy1; STM14_3199; phage(gi169257242) | 2e-33 | Click |
| 37 | complement(2813182..2813258) | tRNA | N/A | Click |
| 38 | complement(2813600..2814163) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM14_3201; phage(gi169257243) | 1e-103 | Click |
| 39 | complement(2814160..2814285) | hypothetical protein; STM14_3202 | N/A | Click |
| 40 | complement(2814436..2815113) | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; STM14_3203; phage(gi169257244) | 3e-130 | Click |
| 41 | complement(2815110..2815250) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM14_3204; phage(gi169257245) | 7e-21 | Click |
| 42 | complement(2815247..2815858) | PHAGE_Gifsy_1: NinG; STM14_3205; phage(gi169257246) | 5e-117 | Click |
| 43 | complement(2815861..2816061) | PHAGE_Gifsy_1: hypothetical protein STM2620.1n.Gifsy1; STM14_3206; phage(gi169257247) | 8e-36 | Click |
| 44 | complement(2816067..2816669) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; STM14_3207; phage(gi169257248) | 2e-111 | Click |
| 45 | complement(2816704..2816883) | PHAGE_Entero_mEp237: hypothetical protein; STM14_3208; phage(gi435439314) | 2e-27 | Click |
| 46 | 2816906..2817040 | prophage DinI; STM14_3209 | N/A | Click |
| 47 | complement(2817069..2817302) | PHAGE_Gifsy_1: bacteriophage putative DNA damage-inducible protein; DinI homolog; STM14_3210; phage(gi169257250) | 2e-38 | Click |
| 48 | complement(2817545..2818177) | hypothetical protein; STM14_3211 | N/A | Click |
| 49 | complement(2818285..2818983) | PHAGE_Salmon_vB_SemP_Emek: Eaa1; STM14_3212; phage(gi399498822) | 3e-57 | Click |
| 50 | complement(2818997..2819692) | PHAGE_Escher_HK639: replication protein 14; STM14_3213; phage(gi356870655) | 9e-57 | Click |
| 51 | complement(2819689..2820573) | PHAGE_Gifsy_1: bacteriophage replication protein O; STM14_3214; phage(gi169257255) | 1e-43 | Click |
| 52 | complement(2820665..2821039) | PHAGE_Gifsy_1: probable regulatory protein; transcriptional activator; lambda CII analog; STM14_3215; phage(gi169257256) | 4e-66 | Click |
| 53 | complement(2820999..2821259) | PHAGE_Gifsy_1: conserved hypothetical prophage protein; putative Cro analog; STM14_3216; phage(gi169257257) | 1e-10 | Click |
| 54 | 2821377..2821736 | PHAGE_Entero_mEp237: hypothetical protein; STM14_3217; phage(gi435439303) | 1e-36 | Click |
| 55 | 2821795..2822634 | PHAGE_Lactob_LF1: chromosome partitioning ATPase; STM14_3218; phage(gi418489414) | 4e-29 | Click |
| 56 | 2822705..2823013 | hypothetical protein; STM14_3219 | N/A | Click |
| 57 | 2823013..2823675 | hypothetical protein; STM14_3220 | N/A | Click |
| 58 | 2824017..2824139 | PHAGE_Gifsy_1: hypothetical protein STM2630.1n.Gifsy1; STM14_3221; phage(gi169257259) | 2e-15 | Click |
| 59 | 2824132..2824290 | PHAGE_Gifsy_1: hypothetical protein STM2630.Gifsy1; STM14_3222; phage(gi169257260) | 1e-25 | Click |
| 60 | 2824312..2824662 | PHAGE_Gifsy_1: hypothetical protein STM2631.Gifsy1; STM14_3223; phage(gi169257261) | 5e-64 | Click |
| 61 | 2824789..2827716 | PHAGE_Gifsy_1: bacteriophage exodeoxyribonuclease VIII-like protein; STM14_3224; phage(gi169257262) | 0.0 | Click |
| 62 | 2827727..2828836 | PHAGE_Gifsy_1: RecT; STM14_3225; phage(gi169257263) | 0.0 | Click |
| 63 | 2828879..2829118 | PHAGE_Gifsy_1: hypothetical protein STM2634.Gifsy1; STM14_3226; phage(gi169257264) | 7e-40 | Click |
| 64 | 2829159..2829443 | PHAGE_Gifsy_1: hypothetical protein STM2635.Gifsy1; STM14_3227; phage(gi169257265) | 8e-52 | Click |
| 65 | complement(2829421..2830650) | PHAGE_Gifsy_1: bacteriophage integrase protein; STM14_3228; phage(gi169257266) | 0.0 | Click |
| 66 | 2830724..2830735 | attR ACAAAAACCATG | N/A | Click |
Region 9, total : 18 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2920065..2920077 | attL AATGCTATTTTTA | N/A | Click |
| 2 | 2920664..2921539 | PROPHAGE_Salmon_LT2: integrase; STM14_3327; phage(gi16766072) | 4e-168 | Click |
| 3 | 2921705..2923579 | putative inner membrane protein; STM14_3328 | N/A | Click |
| 4 | complement(2923839..2925122) | putative inner membrane protein; STM14_3329 | N/A | Click |
| 5 | complement(2926750..2927154) | PROPHAGE_Xantho_33913: ISxcC1 transposase; STM14_3331; phage(gi21231060) | 1e-42 | Click |
| 6 | complement(2927301..2927567) | PROPHAGE_Salmon_LT2: transposase; STM14_3332; phage(gi16766077) | 7e-45 | Click |
| 7 | complement(2928020..2928658) | putative cytoplasmic protein; STM14_3333 | N/A | Click |
| 8 | complement(2928655..2930637) | putative DNA/RNA helicase; STM14_3334 | N/A | Click |
| 9 | 2930916..2931215 | PROPHAGE_Escher_MG1655: IS3 transposase A; STM14_3335; phage(gi226524700) | 2e-41 | Click |
| 10 | 2931212..2932078 | PROPHAGE_Escher_MG1655: IS3 transposase B; STM14_3336; phage(gi16128284) | 3e-145 | Click |
| 11 | complement(2932858..2933397) | PHAGE_Salmon_SSU5: putative repressor of phase 1 flagellin; STM14_3337; phage(gi390013956) | 9e-13 | Click |
| 12 | complement(2933465..2934985) | PHAGE_Escher_phiKT: tail fiber protein; STM14_3338; phage(gi422936632) | 1e-07 | Click |
| 13 | 2935077..2935649 | PHAGE_Escher_D108: G region invertase; STM14_3339; phage(gi281199698) | 4e-67 | Click |
| 14 | 2935806..2935976 | hypothetical protein; STM14_3340 | N/A | Click |
| 15 | complement(2936002..2936229) | hypothetical protein; STM14_3341 | N/A | Click |
| 16 | complement(2936297..2936449) | hypothetical protein; STM14_3342 | N/A | Click |
| 17 | 2936325..2936507 | hypothetical protein; STM14_3343 | N/A | Click |
| 18 | 2936612..2937727 | putative glycosyl transferase; STM14_3344 | N/A | Click |
| 19 | 2937808..2941461 | PHAGE_Bacill_SPBc2: ABC transporter; STM14_3345; phage(gi9630145) | 2e-25 | Click |
| 20 | 2951425..2951437 | attR AATGCTATTTTTA | N/A | Click |
Region 10, total : 28 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(4431457..4432185) | PHAGE_Entero_P1: PmgQ; STM14_5045; phage(gi46401711) | 7e-34 | Click |
| 2 | complement(4432382..4432672) | putative inner membrane protein; STM14_5046 | N/A | Click |
| 3 | complement(4432921..4433376) | PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; STM14_5047; phage(gi418489075) | 2e-24 | Click |
| 4 | complement(4433373..4433978) | putative cytoplasmic protein; STM14_5048 | N/A | Click |
| 5 | complement(4433983..4435728) | PHAGE_Entero_PsP3: gp19; STM14_5049; phage(gi41057371) | 1e-78 | Click |
| 6 | complement(4435731..4436363) | PHAGE_Burkho_BcepMu: gp51; STM14_5050; phage(gi48696961) | 4e-26 | Click |
| 7 | complement(4436356..4437471) | PHAGE_Burkho_BcepMu: gp50; STM14_5051; phage(gi48696960) | 2e-105 | Click |
| 8 | complement(4437462..4437821) | PHAGE_Burkho_BcepMu: gp49; STM14_5052; phage(gi48696959) | 1e-35 | Click |
| 9 | 4437882..4438004 | hypothetical protein; STM14_5053 | N/A | Click |
| 10 | complement(4437985..4439532) | PHAGE_Salmon_epsilon34: GtrC; putative membrane protein; STM14_5054; phage(gi221328637) | 2e-59 | Click |
| 11 | complement(4439532..4440461) | PHAGE_Entero_SfV: bactoprenol glucosyltransferase; STM14_5055; phage(gi19549012) | 3e-152 | Click |
| 12 | complement(4440458..4440820) | PHAGE_Entero_SfV: putative flippase; STM14_5056; phage(gi19549013) | 7e-48 | Click |
| 13 | complement(4441014..4441139) | hypothetical protein; STM14_5057 | N/A | Click |
| 14 | complement(4441148..4441870) | PHAGE_Burkho_BcepMu: gp48; STM14_5058; phage(gi48696958) | 2e-39 | Click |
| 15 | complement(4441880..4442923) | PHAGE_Burkho_BcepMu: gp47; STM14_5059; phage(gi48696957) | 9e-81 | Click |
| 16 | complement(4442911..4443120) | PHAGE_Burkho_BcepMu: gp46; STM14_5060; phage(gi48696956) | 9e-19 | Click |
| 17 | complement(4443120..4444073) | PHAGE_Burkho_BcepMu: gp45; STM14_5061; phage(gi48696955) | 1e-45 | Click |
| 18 | complement(4444073..4446427) | PHAGE_Burkho_BcepMu: gp44; STM14_5062; phage(gi48696954) | 1e-68 | Click |
| 19 | complement(4446524..4446652) | conserved hypothetical protein; STM14_5063 | N/A | Click |
| 20 | complement(4446981..4447505) | PHAGE_Burkho_BcepMu: gp40; STM14_5065; phage(gi48696950) | 1e-68 | Click |
| 21 | complement(4447505..4448932) | PHAGE_Burkho_BcepMu: gp39; STM14_5066; phage(gi48696949) | 0.0 | Click |
| 22 | complement(4448922..4449119) | PHAGE_Burkho_BcepMu: gp38; STM14_5067; phage(gi48696948) | 2e-08 | Click |
| 23 | complement(4449116..4449571) | PHAGE_Burkho_BcepMu: gp37; STM14_5068; phage(gi48696947) | 2e-13 | Click |
| 24 | complement(4449731..4450045) | PHAGE_Burkho_BcepMu: gp25; STM14_5069; phage(gi48696935) | 3e-23 | Click |
| 25 | complement(4450058..4450663) | PHAGE_Burkho_BcepMu: gp22; STM14_5070; phage(gi48696932) | 5e-56 | Click |
| 26 | complement(4450666..4450953) | PHAGE_Burkho_BcepMu: gp21; STM14_5071; phage(gi48696931) | 7e-21 | Click |
| 27 | 4451435..4451575 | hypothetical protein; STM14_5072 | N/A | Click |
| 28 | 4451529..4451876 | PHAGE_Burkho_BcepMu: gp01; STM14_5073; phage(gi48696911) | 7e-24 | Click |