| Definition | Vibrio cholerae O395 chromosome I, complete sequence. |
|---|---|
| Accession | CP001235 |
| Length | 3,024,078 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 52 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1220563..1221300) | PHAGE_Aeromo_phiO18P: putative cI repressor; VC395_1145; phage(gi148727133) | 4e-33 | Click |
| 2 | 1221453..1221677 | PHAGE_Escher_D108: Ner; VC395_1146; phage(gi281199646) | 5e-13 | Click |
| 3 | 1221764..1223692 | PHAGE_Escher_D108: DNA transposition protein A; VC395_1147; phage(gi281199647) | 7e-171 | Click |
| 4 | 1223719..1224663 | PHAGE_Escher_D108: DNA transposition protein B; VC395_1148; phage(gi281199648) | 3e-79 | Click |
| 5 | 1224671..1224895 | hypothetical protein; VC395_1149 | N/A | Click |
| 6 | 1224905..1225345 | hypothetical protein; VC395_1150 | N/A | Click |
| 7 | 1225355..1225720 | hypothetical protein; VC395_1151 | N/A | Click |
| 8 | 1225695..1225889 | hypothetical protein; VC395_1152 | N/A | Click |
| 9 | 1225876..1226490 | PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; VC395_1153; phage(gi198449283) | 9e-47 | Click |
| 10 | 1226500..1226772 | hypothetical protein; VC395_1154 | N/A | Click |
| 11 | 1226765..1227007 | hypothetical protein; VC395_1155 | N/A | Click |
| 12 | 1226991..1227188 | hypothetical protein; VC395_1156 | N/A | Click |
| 13 | 1227185..1227655 | hypothetical protein; VC395_1157 | N/A | Click |
| 14 | 1227652..1228182 | PHAGE_Haemop_SuMu: hypothetical protein; VC395_1158; phage(gi418489048) | 9e-31 | Click |
| 15 | 1228262..1228495 | hypothetical protein; VC395_1159 | N/A | Click |
| 16 | 1228709..1229287 | PHAGE_Escher_D108: hypothetical protein; VC395_1160; phage(gi281199659) | 2e-27 | Click |
| 17 | 1229274..1229522 | hypothetical protein; VC395_1161 | N/A | Click |
| 18 | 1229601..1230017 | PHAGE_Escher_D108: GemB; VC395_1162; phage(gi281199660) | 1e-18 | Click |
| 19 | 1230102..1230650 | PHAGE_Pseudo_AF: putative endolysin; VC395_1163; phage(gi431810312) | 2e-19 | Click |
| 20 | 1230650..1230940 | hypothetical protein; VC395_1164 | N/A | Click |
| 21 | 1230916..1231512 | hypothetical protein; VC395_1165 | N/A | Click |
| 22 | 1231509..1231739 | PHAGE_Halomo_1: hypothetical protein HAPgp41; VC395_1166; phage(gi167832386) | 1e-05 | Click |
| 23 | 1231739..1232038 | hypothetical protein; VC395_1167 | N/A | Click |
| 24 | 1232047..1232337 | PHAGE_Escher_D108: hypothetical protein; VC395_1168; phage(gi281199669) | 6e-23 | Click |
| 25 | 1232349..1232930 | PHAGE_Escher_D108: hypothetical protein; VC395_1169; phage(gi281199670) | 1e-33 | Click |
| 26 | 1232931..1234496 | PHAGE_Escher_D108: hypothetical protein; VC395_1170; phage(gi281199671) | 3e-131 | Click |
| 27 | 1234493..1236052 | PHAGE_Haemop_SuMu: portal protein gp29; VC395_1171; phage(gi418489080) | 7e-57 | Click |
| 28 | 1236036..1236818 | PHAGE_Escher_D108: virion morphogenesis; VC395_1172; phage(gi281199673) | 5e-35 | Click |
| 29 | 1236830..1237078 | hypothetical protein; VC395_1173 | N/A | Click |
| 30 | 1237075..1237587 | PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; VC395_1174; phage(gi66391579) | 7e-30 | Click |
| 31 | 1237584..1238219 | hypothetical protein; VC395_1175 | N/A | Click |
| 32 | 1238219..1238503 | hypothetical protein; VC395_1176 | N/A | Click |
| 33 | 1238869..1239252 | PHAGE_Pseudo_JBD30: hypothetical protein; VC395_1177; phage(gi448244621) | 3e-08 | Click |
| 34 | 1239288..1239791 | PHAGE_Escher_D108: scaffold protein; VC395_1178; phage(gi281199677) | 4e-06 | Click |
| 35 | 1239794..1240693 | PHAGE_Pseudo_JBD88a: hypothetical protein; VC395_1179; phage(gi448244723) | 2e-61 | Click |
| 36 | 1240760..1241335 | hypothetical protein; VC395_1180 | N/A | Click |
| 37 | 1241341..1241775 | PHAGE_Escher_D108: hypothetical protein; VC395_1181; phage(gi281199680) | 9e-08 | Click |
| 38 | 1241775..1242317 | PHAGE_Rhodob_RcapMu: virion morphogenesis protein; VC395_1182; phage(gi356870876) | 1e-08 | Click |
| 39 | 1242314..1242913 | hypothetical protein; VC395_1183 | N/A | Click |
| 40 | 1242927..1243127 | hypothetical protein; VC395_1184 | N/A | Click |
| 41 | 1243130..1244614 | PHAGE_Escher_D108: tail sheath protein; VC395_1185; phage(gi281199683) | 3e-95 | Click |
| 42 | 1244629..1244982 | hypothetical protein; VC395_1186 | N/A | Click |
| 43 | 1244982..1245326 | PHAGE_Escher_D108: hypothetical protein; VC395_1187; phage(gi281199685) | 2e-13 | Click |
| 44 | 1245452..1247203 | PHAGE_Salmon_ST64B: tail protein; VC395_1188; phage(gi23505460) | 6e-06 | Click |
| 45 | 1247215..1248534 | PHAGE_Escher_D108: DNA circularization protein; VC395_1189; phage(gi281199688) | 1e-20 | Click |
| 46 | 1248527..1249603 | PHAGE_Escher_D108: baseplate assembly protein; VC395_1190; phage(gi281199689) | 6e-48 | Click |
| 47 | 1249597..1250214 | PHAGE_Escher_D108: baseplate assembly protein; VC395_1191; phage(gi281199690) | 9e-26 | Click |
| 48 | 1250217..1250666 | PHAGE_Escher_D108: hypothetical protein; VC395_1192; phage(gi281199691) | 4e-19 | Click |
| 49 | 1250656..1251723 | PHAGE_Escher_D108: hypothetical protein; VC395_1193; phage(gi281199692) | 1e-45 | Click |
| 50 | 1251708..1252295 | PHAGE_Escher_D108: hypothetical protein; VC395_1194; phage(gi281199693) | 3e-16 | Click |
| 51 | 1252295..1253533 | PHAGE_Escher_D108: tail fiber protein; VC395_1195; phage(gi281199694) | 1e-06 | Click |
| 52 | 1253533..1254072 | PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; VC395_1196; phage(gi422936603) | 3e-27 | Click |
Region 2, total : 55 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1292120..1292860) | PHAGE_Synech_S_CRM01: methyltransferase domain-containing protein; VC395_1230; phage(gi333798309) | 1e-24 | Click |
| 2 | complement(1292986..1293855) | PHAGE_Marseillevirus: hypothetical protein MAR_ORF255; VC395_1231; phage(gi284504277) | 8e-08 | Click |
| 3 | 1294147..1295922 | PHAGE_Megavi_lba: asparaginyl-tRNA synthetase; VC395_1232; phage(gi448825735) | 4e-07 | Click |
| 4 | 1296019..1296597 | PHAGE_Entero_CC31: thymidine kinase; VC395_1233; phage(gi311993109) | 6e-55 | Click |
| 5 | complement(1297495..1298034) | PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; VC395_1235; phage(gi422936603) | 3e-27 | Click |
| 6 | complement(1298034..1299272) | PHAGE_Escher_D108: tail fiber protein; VC395_1236; phage(gi281199694) | 1e-06 | Click |
| 7 | complement(1299272..1299859) | PHAGE_Escher_D108: hypothetical protein; VC395_1237; phage(gi281199693) | 3e-16 | Click |
| 8 | complement(1299844..1300911) | PHAGE_Escher_D108: hypothetical protein; VC395_1238; phage(gi281199692) | 1e-45 | Click |
| 9 | complement(1300901..1301350) | PHAGE_Escher_D108: hypothetical protein; VC395_1239; phage(gi281199691) | 4e-19 | Click |
| 10 | complement(1301353..1301970) | PHAGE_Escher_D108: baseplate assembly protein; VC395_1240; phage(gi281199690) | 9e-26 | Click |
| 11 | complement(1301964..1303040) | PHAGE_Escher_D108: baseplate assembly protein; VC395_1241; phage(gi281199689) | 6e-48 | Click |
| 12 | complement(1303033..1304352) | PHAGE_Escher_D108: DNA circularization protein; VC395_1242; phage(gi281199688) | 1e-20 | Click |
| 13 | complement(1304364..1306115) | PHAGE_Salmon_ST64B: tail protein; VC395_1243; phage(gi23505460) | 6e-06 | Click |
| 14 | complement(1306241..1306585) | PHAGE_Escher_D108: hypothetical protein; VC395_1244; phage(gi281199685) | 2e-13 | Click |
| 15 | complement(1306585..1306938) | hypothetical protein; VC395_1245 | N/A | Click |
| 16 | complement(1306953..1308437) | PHAGE_Escher_D108: tail sheath protein; VC395_1246; phage(gi281199683) | 3e-95 | Click |
| 17 | complement(1308440..1308640) | hypothetical protein; VC395_1247 | N/A | Click |
| 18 | complement(1308654..1309253) | hypothetical protein; VC395_1248 | N/A | Click |
| 19 | complement(1309250..1309792) | PHAGE_Rhodob_RcapMu: virion morphogenesis protein; VC395_1249; phage(gi356870876) | 1e-08 | Click |
| 20 | complement(1309792..1310226) | PHAGE_Escher_D108: hypothetical protein; VC395_1250; phage(gi281199680) | 9e-08 | Click |
| 21 | complement(1310232..1310807) | hypothetical protein; VC395_1251 | N/A | Click |
| 22 | complement(1310874..1311773) | PHAGE_Pseudo_JBD88a: hypothetical protein; VC395_1252; phage(gi448244723) | 2e-61 | Click |
| 23 | complement(1311776..1312279) | PHAGE_Escher_D108: scaffold protein; VC395_1253; phage(gi281199677) | 4e-06 | Click |
| 24 | complement(1312315..1312698) | PHAGE_Pseudo_JBD30: hypothetical protein; VC395_1254; phage(gi448244621) | 3e-08 | Click |
| 25 | complement(1313064..1313348) | hypothetical protein; VC395_1255 | N/A | Click |
| 26 | complement(1313348..1313983) | hypothetical protein; VC395_1256 | N/A | Click |
| 27 | complement(1313980..1314492) | PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; VC395_1257; phage(gi66391579) | 7e-30 | Click |
| 28 | complement(1314489..1314737) | hypothetical protein; VC395_1258 | N/A | Click |
| 29 | complement(1314749..1315531) | PHAGE_Escher_D108: virion morphogenesis; VC395_1259; phage(gi281199673) | 5e-35 | Click |
| 30 | complement(1315515..1317074) | PHAGE_Haemop_SuMu: portal protein gp29; VC395_1260; phage(gi418489080) | 7e-57 | Click |
| 31 | complement(1317071..1318636) | PHAGE_Escher_D108: hypothetical protein; VC395_1261; phage(gi281199671) | 3e-131 | Click |
| 32 | complement(1318637..1319218) | PHAGE_Escher_D108: hypothetical protein; VC395_1262; phage(gi281199670) | 1e-33 | Click |
| 33 | complement(1319230..1319520) | PHAGE_Escher_D108: hypothetical protein; VC395_1263; phage(gi281199669) | 6e-23 | Click |
| 34 | complement(1319529..1319828) | hypothetical protein; VC395_1264 | N/A | Click |
| 35 | complement(1319828..1320058) | PHAGE_Halomo_1: hypothetical protein HAPgp41; VC395_1265; phage(gi167832386) | 1e-05 | Click |
| 36 | complement(1320055..1320651) | hypothetical protein; VC395_1266 | N/A | Click |
| 37 | complement(1320627..1320917) | hypothetical protein; VC395_1267 | N/A | Click |
| 38 | complement(1320917..1321465) | PHAGE_Pseudo_AF: putative endolysin; VC395_1268; phage(gi431810312) | 2e-19 | Click |
| 39 | complement(1321550..1321966) | PHAGE_Escher_D108: GemB; VC395_1269; phage(gi281199660) | 1e-18 | Click |
| 40 | complement(1322045..1322293) | hypothetical protein; VC395_1270 | N/A | Click |
| 41 | complement(1322280..1322858) | PHAGE_Escher_D108: hypothetical protein; VC395_1271; phage(gi281199659) | 2e-27 | Click |
| 42 | complement(1323072..1323305) | hypothetical protein; VC395_1272 | N/A | Click |
| 43 | complement(1323385..1323915) | PHAGE_Haemop_SuMu: hypothetical protein; VC395_1273; phage(gi418489048) | 9e-31 | Click |
| 44 | complement(1323912..1324382) | hypothetical protein; VC395_1274 | N/A | Click |
| 45 | complement(1324379..1324576) | hypothetical protein; VC395_1275 | N/A | Click |
| 46 | complement(1324560..1324802) | hypothetical protein; VC395_1276 | N/A | Click |
| 47 | complement(1324795..1325067) | hypothetical protein; VC395_1277 | N/A | Click |
| 48 | complement(1325077..1325691) | PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; VC395_1278; phage(gi198449283) | 9e-47 | Click |
| 49 | complement(1325678..1325872) | hypothetical protein; VC395_1279 | N/A | Click |
| 50 | complement(1325847..1326212) | hypothetical protein; VC395_1280 | N/A | Click |
| 51 | complement(1326222..1326662) | hypothetical protein; VC395_1281 | N/A | Click |
| 52 | complement(1326672..1326896) | hypothetical protein; VC395_1282 | N/A | Click |
| 53 | complement(1326904..1327848) | PHAGE_Escher_D108: DNA transposition protein B; VC395_1283; phage(gi281199648) | 3e-79 | Click |
| 54 | complement(1327875..1329803) | PHAGE_Escher_D108: DNA transposition protein A; VC395_1284; phage(gi281199647) | 7e-171 | Click |
| 55 | complement(1329890..1330114) | PHAGE_Escher_D108: Ner; VC395_1285; phage(gi281199646) | 5e-13 | Click |
| 56 | 1330267..1331004 | PHAGE_Aeromo_phiO18P: putative cI repressor; VC395_1286; phage(gi148727133) | 4e-33 | Click |
Region 3, total : 18 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1646195..1646569) | PHAGE_Vibrio_CTX: CtxB; VC395_1570; phage(gi332672307) | 3e-67 | Click |
| 2 | complement(1646566..1647342) | PHAGE_Vibrio_CTX: CtxA; VC395_1571; phage(gi332672306) | 3e-154 | Click |
| 3 | complement(1647462..1648661) | PHAGE_Vibrio_CTX: Zot; VC395_1572; phage(gi332672305) | 0.0 | Click |
| 4 | complement(1648658..1648951) | PHAGE_Vibrio_CTX: Ace; VC395_1573; phage(gi332672304) | 1e-49 | Click |
| 5 | complement(1648948..1650231) | PHAGE_Vibrio_CTX: hypothetical protein; VC395_1574; phage(gi332672303) | 0.0 | Click |
| 6 | complement(1650242..1650490) | PHAGE_Vibrio_CTX: Cep; VC395_1575; phage(gi332672302) | 9e-37 | Click |
| 7 | complement(1650626..1651006) | PHAGE_Vibrio_CTX: RstB; VC395_1576; phage(gi332672301) | 2e-69 | Click |
| 8 | complement(1650984..1652063) | PHAGE_Vibrio_CTX: RstA; VC395_1577; phage(gi332672300) | 0.0 | Click |
| 9 | 1652195..1652530 | PHAGE_Vibrio_CTX: RstR; VC395_1578; phage(gi332672299) | 2e-08 | Click |
| 10 | complement(1652772..1653152) | PHAGE_Vibrio_CTX: RstB; VC395_1579; phage(gi332672301) | 2e-69 | Click |
| 11 | complement(1653130..1654209) | PHAGE_Vibrio_CTX: RstA; VC395_1580; phage(gi332672300) | 0.0 | Click |
| 12 | 1654341..1654676 | PHAGE_Vibrio_CTX: RstR; VC395_1581; phage(gi332672299) | 2e-08 | Click |
| 13 | 1655146..1655298 | hypothetical protein; VC395_1582 | N/A | Click |
| 14 | complement(1655295..1655879) | conserved hypothetical protein; VC395_1583 | N/A | Click |
| 15 | complement(1655872..1656039) | conserved hypothetical protein; VC395_1584 | N/A | Click |
| 16 | complement(1656117..1656809) | conserved hypothetical protein; VC395_1585 | N/A | Click |
| 17 | complement(1656939..1657223) | conserved hypothetical protein; VC395_1586 | N/A | Click |
| 18 | complement(1657228..1658796) | PHAGE_Entero_Ike: G II protein; VC395_1587; phage(gi9626233) | 6e-66 | Click |
Region 4, total : 16 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2020323..2020529) | PHAGE_Entero_P4: transcriptional regulator; VC395_1899; phage(gi9627517) | 3e-09 | Click |
| 2 | 2020643..2021119 | putative DNA repair protein RadC; VC395_1900 | N/A | Click |
| 3 | 2021116..2021253 | conserved hypothetical protein; VC395_1901 | N/A | Click |
| 4 | complement(2021349..2022044) | conserved hypothetical protein; VC395_1902 | N/A | Click |
| 5 | complement(2022041..2022913) | PHAGE_Entero_Sf6: putative transposase OrfB; VC395_1903; phage(gi41057343) | 3e-115 | Click |
| 6 | complement(2022910..2023254) | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; VC395_1904; phage(gi24373865) | 7e-08 | Click |
| 7 | complement(2023261..2024301) | PHAGE_Escher_D108: tail assembly protein; VC395_1905; phage(gi281199687) | 2e-27 | Click |
| 8 | complement(2024436..2024795) | PHAGE_Entero_Mu: hypothetical protein Mup41; VC395_1906; phage(gi9633532) | 2e-09 | Click |
| 9 | complement(2024844..2025221) | conserved hypothetical protein; VC395_1907 | N/A | Click |
| 10 | complement(2025276..2025854) | conserved hypothetical protein; VC395_1908 | N/A | Click |
| 11 | complement(2025873..2026193) | putative transcriptional regulator; VC395_1909 | N/A | Click |
| 12 | complement(2026180..2026554) | PHAGE_Entero_Mu: Mor; VC395_1910; phage(gi9633507) | 3e-07 | Click |
| 13 | complement(2026956..2027222) | conserved hypothetical protein; VC395_1911 | N/A | Click |
| 14 | complement(2027364..2027825) | conserved hypothetical protein; VC395_1912 | N/A | Click |
| 15 | complement(2027828..2028979) | PHAGE_Pseudo_B3: putative transposase B subunit; VC395_1913; phage(gi56692579) | 1e-45 | Click |
| 16 | complement(2028909..2030666) | PHAGE_Pseudo_B3: putative transposase A subunit; VC395_1914; phage(gi56692580) | 1e-92 | Click |