| Definition | Sphingobium sp. SYK-6 DNA, complete genome. |
|---|---|
| Accession | AP012222 |
| Length | 4,199,332 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 25 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2348502..2348513 | attL GCTTCATGGCCC | N/A | Click |
| 2 | complement(2357952..2358602) | PHAGE_Pseudo_vB_PaeS_PMG1: integrase; SLG_21540; phage(gi374531680) | 2e-05 | Click |
| 3 | 2358863..2358875 | attL CCTTCAAGGCACC | N/A | Click |
| 4 | 2359362..2360162 | PHAGE_Staphy_vB_SepiS_phiIPLA5: integrase; SLG_21550; phage(gi399528924) | 3e-05 | Click |
| 5 | 2360391..2361953 | acyl-CoA synthetase; SLG_21560 | N/A | Click |
| 6 | 2361978..2361990 | attR CCTTCAAGGCACC | N/A | Click |
| 7 | 2362036..2362431 | glyoxalase-family protein; SLG_21570 | N/A | Click |
| 8 | complement(2362383..2363045) | putative AraC family transcriptional regulator; SLG_21580 | N/A | Click |
| 9 | 2363151..2364527 | putative hydrolase; SLG_21590 | N/A | Click |
| 10 | 2364549..2365418 | hypothetical protein; SLG_21600 | N/A | Click |
| 11 | 2365541..2365552 | attR GCTTCATGGCCC | N/A | Click |
| 12 | complement(2365710..2366774) | PHAGE_Aggreg_S1249: putative integrase; SLG_21610; phage(gi273809608) | 1e-21 | Click |
| 13 | complement(2366953..2367162) | hypothetical protein; SLG_21620 | N/A | Click |
| 14 | complement(2367166..2367783) | hypothetical protein; SLG_21630 | N/A | Click |
| 15 | complement(2367788..2368447) | PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; SLG_21640; phage(gi399528948) | 6e-12 | Click |
| 16 | complement(2368440..2368679) | PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; SLG_21650; phage(gi399528947) | 8e-10 | Click |
| 17 | complement(2368759..2369181) | hypothetical protein; SLG_21660 | N/A | Click |
| 18 | complement(2369309..2369548) | hypothetical protein; SLG_21670 | N/A | Click |
| 19 | complement(2369566..2370243) | PHAGE_Rhodoc_REQ2: hypothetical protein; SLG_21680; phage(gi372449879) | 1e-32 | Click |
| 20 | complement(2370240..2371022) | PHAGE_Rhodoc_REQ2: exonuclease; SLG_21690; phage(gi372449878) | 5e-38 | Click |
| 21 | complement(2371026..2372117) | PHAGE_Iodoba_phiPLPE: gp77 putative tail-fiber protein; SLG_21700; phage(gi197085691) | 8e-33 | Click |
| 22 | complement(2372147..2372308) | hypothetical protein; SLG_21710 | N/A | Click |
| 23 | complement(2372301..2372600) | hypothetical protein; SLG_21720 | N/A | Click |
| 24 | complement(2372597..2372770) | hypothetical protein; SLG_21730 | N/A | Click |
| 25 | complement(2372782..2373120) | hypothetical protein; SLG_21740 | N/A | Click |
| 26 | complement(2373117..2373419) | hypothetical protein; SLG_21750 | N/A | Click |
| 27 | complement(2373416..2373604) | hypothetical protein; SLG_21760 | N/A | Click |
| 28 | complement(2373601..2373852) | hypothetical protein; SLG_21770 | N/A | Click |
| 29 | complement(2373849..2375096) | PHAGE_Entero_ES18: gp53; SLG_21780; phage(gi62362266) | 4e-45 | Click |
Region 2, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2380443..2380697 | PHAGE_Sinorh_PBC5: hypothetical protein PBC5p55; SLG_21930; phage(gi18071259) | 2e-20 | Click |
| 2 | 2380699..2381577 | PHAGE_Entero_P4: DNA primase; SLG_21940; phage(gi9627512) | 2e-09 | Click |
| 3 | 2381574..2382899 | PHAGE_Mycoba_Nigel: gp52; SLG_21950; phage(gi194100566) | 6e-12 | Click |
| 4 | 2383218..2383508 | hypothetical protein; SLG_21960 | N/A | Click |
| 5 | 2383564..2383791 | hypothetical protein; SLG_21970 | N/A | Click |
| 6 | 2383816..2384052 | hypothetical protein; SLG_21980 | N/A | Click |
| 7 | 2384049..2384444 | PHAGE_Salico_CGphi29: hypothetical protein; SLG_21990; phage(gi472340168) | 1e-19 | Click |
| 8 | 2384425..2385648 | PHAGE_Liston_phiHSIC: putative terminase large subunit; SLG_22000; phage(gi62362371) | 5e-121 | Click |
| 9 | 2385695..2387152 | PHAGE_Iodoba_phiPLPE: gp19 putative portal protein; SLG_22010; phage(gi197085633) | 1e-27 | Click |
| 10 | 2387149..2387340 | hypothetical protein; SLG_22020 | N/A | Click |
| 11 | 2387344..2388180 | PHAGE_Aeromo_vB_AsaM_56: putative head protein; SLG_22030; phage(gi422937535) | 2e-12 | Click |
| 12 | 2388275..2388826 | PHAGE_Brucel_Tb: putative DNA-binding protein; SLG_22040; phage(gi418487736) | 2e-29 | Click |
| 13 | 2388868..2389995 | PHAGE_Edward_MSW_3: putative head protein; SLG_22050; phage(gi448261038) | 4e-29 | Click |
| 14 | 2390008..2390466 | PHAGE_Klebsi_JD001: hypothetical protein; SLG_22060; phage(gi448245125) | 3e-14 | Click |
| 15 | 2390481..2391428 | PHAGE_Synech_S_CBS4: major capsid protein; SLG_22070; phage(gi374531766) | 1e-17 | Click |
| 16 | 2391441..2391746 | hypothetical protein; SLG_22080 | N/A | Click |
| 17 | 2391818..2392213 | conserved hypothetical protein; SLG_22090 | N/A | Click |
| 18 | 2392210..2392587 | hypothetical protein; SLG_22100 | N/A | Click |
| 19 | 2393384..2393812 | PHAGE_Marino_P12026: hypothetical protein; SLG_22110; phage(gi399528326) | 4e-05 | Click |
Region 3, total : 21 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3571064..3573397 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SLG_33040; phage(gi15800640) | 0.0 | Click |
| 2 | 3573597..3574310 | hypothetical protein; SLG_33050 | N/A | Click |
| 3 | 3574335..3574976 | glutathione S-transferase; SLG_33060 | N/A | Click |
| 4 | complement(3575079..3575822) | PHAGE_Camelp_virus: CMLV006; SLG_33070; phage(gi18640240) | 5e-16 | Click |
| 5 | complement(3576052..3577116) | PHAGE_Human__4: EBNA-2; SLG_33080; phage(gi82503202) | 3e-14 | Click |
| 6 | complement(3577317..3577814) | PHAGE_Tetras_SI1: hypothetical protein; SLG_33090; phage(gi472342232) | 7e-10 | Click |
| 7 | complement(3577854..3580079) | PHAGE_Tetras_SI1: hypothetical protein; SLG_33100; phage(gi472342233) | 1e-68 | Click |
| 8 | complement(3580084..3580497) | PHAGE_phiJL001: cell wall-associated hydrolase; SLG_33110; phage(gi62327194) | 1e-05 | Click |
| 9 | complement(3580501..3581322) | PHAGE_Tetras_SI1: hypothetical protein; SLG_33120; phage(gi472342235) | 1e-26 | Click |
| 10 | complement(3581319..3583649) | PHAGE_Escher_phAPEC8: hypothetical protein; SLG_33130; phage(gi448260438) | 6e-63 | Click |
| 11 | complement(3583731..3584324) | PHAGE_Cyanop_MED4_184: tail tape measure protein; SLG_33140; phage(gi472340568) | 4e-09 | Click |
| 12 | complement(3584317..3584532) | hypothetical protein; SLG_33150 | N/A | Click |
| 13 | complement(3584529..3584843) | hypothetical protein; SLG_33160 | N/A | Click |
| 14 | complement(3584840..3585247) | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; SLG_33170; phage(gi461474972) | 2e-15 | Click |
| 15 | complement(3585297..3585692) | hypothetical protein; SLG_33180 | N/A | Click |
| 16 | complement(3585689..3586228) | PHAGE_Rhodob_RcapNL: hypothetical protein; SLG_33190; phage(gi461474967) | 1e-06 | Click |
| 17 | complement(3586334..3587473) | PHAGE_Entero_phiP27: putative major capsid protein; SLG_33200; phage(gi18249904) | 3e-83 | Click |
| 18 | complement(3587591..3588064) | PHAGE_Azospi_Cd: phage head maturation protease; SLG_33210; phage(gi168495135) | 5e-19 | Click |
| 19 | complement(3588061..3589206) | PHAGE_Strept_6: portal protein; SLG_33220; phage(gi93007441) | 8e-17 | Click |
| 20 | complement(3589384..3590091) | LuxR family transcriptional regulator; SLG_33230 | N/A | Click |
| 21 | complement(3590189..3591409) | PHAGE_Strept_6: terminase large subunit; SLG_33240; phage(gi93007440) | 2e-55 | Click |