Definition Escherichia coli SE15 DNA, complete genome.
Accession AP009378
Length 4,717,338
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 66 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1135343..1135357  attL    GGCTTATTTCAGCTC  N/A  Click
2 complement(1138557..1139018)  PHAGE_Vibrio_KVP40: NMN adenylyl tranferase; ECSF_1034; phage(gi34419395)  6e-05  Click
3 complement(1139028..1139681)  conserved hypothetical protein; ECSF_1035  N/A  Click
4 1139853..1141103  isocitrate dehydrogenase; ECSF_1036  N/A  Click
5 complement(1141217..1142359)  PHAGE_Entero_HK630: integrase; ECSF_1037; phage(gi428782814)  4e-50  Click
6 complement(1142349..1142585)  phage excisionase; ECSF_1038  N/A  Click
7 complement(1142725..1142964)  PHAGE_Entero_phiP27: hypothetical protein P27p03; ECSF_1039; phage(gi18249867)  2e-07  Click
8 complement(1143012..1143230)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip097; ECSF_1040; phage(gi20065892)  3e-33  Click
9 complement(1143329..1143610)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip098; ECSF_1041; phage(gi20065893)  2e-48  Click
10 complement(1143621..1143812)  PHAGE_Entero_HK630: hypothetical protein; ECSF_1042; phage(gi428782820)  2e-27  Click
11 complement(1143785..1143973)  PHAGE_Entero_HK630: hypothetical protein; ECSF_1043; phage(gi428782821)  2e-28  Click
12 complement(1143964..1144644)  PHAGE_Stx2_c_1717: exonuclease; ECSF_1044; phage(gi209447136)  4e-132  Click
13 complement(1144641..1145426)  PHAGE_Entero_HK630: Bet protein; ECSF_1045; phage(gi428782823)  7e-151  Click
14 complement(1145432..1145728)  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; ECSF_1046; phage(gi116222045)  1e-50  Click
15 complement(1146486..1146818)  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0305; ECSF_1047; phage(gi41179237)  2e-27  Click
16 complement(1146841..1147914)  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0304; ECSF_1048; phage(gi41179236)  2e-66  Click
17 complement(1147983..1148675)  PHAGE_Entero_ST104: CI; ECSF_1049; phage(gi46358671)  3e-110  Click
18 1148719..1148731  attL    TTTGCTATTGTTA  N/A  Click
19 1148786..1149013  PHAGE_Salmon_ST160: Cro; ECSF_1050; phage(gi318065926)  9e-24  Click
20 1149038..1149583  PHAGE_Entero_mEp237: CII protein; ECSF_1051; phage(gi435439306)  5e-64  Click
21 1149670..1150599  PHAGE_Stx2_c_I: O protein; ECSF_1052; phage(gi20065919)  6e-113  Click
22 1150596..1151297  PHAGE_Entero_HK140: DNA replication protein P; ECSF_1053; phage(gi428781992)  3e-132  Click
23 1151294..1151596  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip128; ECSF_1054; phage(gi20065923)  7e-43  Click
24 1151664..1151996  PHAGE_Acinet_Acj61: putative quaternary ammonium compound-resistance protein qacE; ECSF_1055; phage(gi311992758)  1e-10  Click
25 1152252..1153778  PHAGE_Bacill_WBeta: putative site-specific recombinase; ECSF_1056; phage(gi85701406)  5e-09  Click
26 complement(1154128..1155171)  PHAGE_Mycoba_Omega: gp105; ECSF_1057; phage(gi29566839)  4e-13  Click
27 1155619..1156074  PHAGE_Cronob_phiES15: hypothetical protein; ECSF_1058; phage(gi401817579)  1e-60  Click
28 1156074..1156244  PHAGE_Escher_HK639: NinE; ECSF_1059; phage(gi356870663)  1e-14  Click
29 1156237..1156527  PHAGE_Entero_mEp237: hypothetical protein; ECSF_1060; phage(gi435439317)  2e-48  Click
30 1156524..1156886  PHAGE_Entero_mEp237: Holliday junction resolvase RusA; ECSF_1061; phage(gi435439318)  1e-61  Click
31 1157109..1157492  PHAGE_Entero_2008: antitermination protein Q; ECSF_1062; phage(gi209427762)  2e-56  Click
32 complement(1157681..1158763)  putative outer membrane porin protein; ECSF_1063  N/A  Click
33 1159353..1159568  PHAGE_Stx2_c_II: holin; ECSF_1064; phage(gi302393164)  1e-28  Click
34 1159568..1160065  PHAGE_Entero_cdtI: lysin; ECSF_1065; phage(gi148609440)  8e-94  Click
35 1160062..1160505  PHAGE_Entero_HK97: Rz lysis protein; ECSF_1066; phage(gi9634214)  1e-55  Click
36 1161150..1161428  PHAGE_Entero_mEp460: hypothetical protein; ECSF_1067; phage(gi428782375)  1e-10  Click
37 1161510..1162058  PHAGE_Entero_HK630: terminase small subunit nu1; ECSF_1068; phage(gi428782788)  4e-51  Click
38 1162030..1163958  PHAGE_Entero_HK630: terminase large subunit A; ECSF_1069; phage(gi428782789)  0.0  Click
39 1163942..1164148  PHAGE_Entero_HK630: head-tail connector W; ECSF_1070; phage(gi428782790)  1e-10  Click
40 1164145..1165737  PHAGE_Entero_HK630: portal protein B; ECSF_1071; phage(gi428782791)  0.0  Click
41 1165727..1167232  PHAGE_Entero_HK630: head maturation protease C; ECSF_1072; phage(gi428782792)  3e-107  Click
42 1167269..1167616  PHAGE_Entero_HK630: head decoration protein D; ECSF_1073; phage(gi428782794)  2e-24  Click
43 1167674..1168702  PHAGE_Entero_HK630: major head subunit E; ECSF_1074; phage(gi428782795)  4e-117  Click
44 1168754..1169128  PHAGE_Entero_HK225: head assembly protein Fi; ECSF_1075; phage(gi428782384)  1e-07  Click
45 1169121..1169474  PHAGE_Entero_HK630: head-tail connector Fii; ECSF_1076; phage(gi428782797)  9e-40  Click
46 1169486..1170064  PHAGE_Entero_HK630: minor tail protein Z; ECSF_1077; phage(gi428782798)  5e-99  Click
47 1170061..1170456  PHAGE_Entero_HK630: minor tail protein U; ECSF_1078; phage(gi428782799)  1e-70  Click
48 1170464..1171204  PHAGE_Entero_HK630: major tail protein V; ECSF_1079; phage(gi428782800)  8e-136  Click
49 1171220..1171642  PHAGE_Entero_HK630: minor tail protein G; ECSF_1080; phage(gi428782801)  3e-74  Click
50 1171624..1172058  PHAGE_Entero_HK630: tail assembly protein GT; ECSF_1081; phage(gi428782802)  8e-80  Click
51 1172051..1174612  PHAGE_Entero_HK630: tail length tape measure protein H; ECSF_1082; phage(gi428782803)  0.0  Click
52 1174609..1174938  PHAGE_Entero_HK630: minor tail protein M; ECSF_1083; phage(gi428782804)  5e-53  Click
53 1174938..1175636  PHAGE_Entero_HK630: minor tail protein L; ECSF_1084; phage(gi428782805)  1e-132  Click
54 1175642..1176385  PHAGE_Entero_mEp460: tail fiber component; ECSF_1085; phage(gi428782332)  5e-147  Click
55 1176322..1176954  PHAGE_Entero_HK630: tail component I; ECSF_1086; phage(gi428782807)  8e-112  Click
56 1177015..1177383  PHAGE_Entero_HK630: tail fiber J; ECSF_1087; phage(gi428782808)  1e-61  Click
57 1177562..1179103  transposase; ECSF_1088  N/A  Click
58 1179115..1179864  PROPHAGE_Escher_CFT073: transposase/IS protein; ECSF_1089; phage(gi26248359)  1e-22  Click
59 1179886..1182999  PHAGE_Entero_HK630: tail fiber J; ECSF_1090; phage(gi428782808)  0.0  Click
60 1183052..1184986  PHAGE_Entero_mEp460: side tail fiber protein; ECSF_1091; phage(gi428782336)  1e-78  Click
61 1185068..1185493  PHAGE_Stx2_c_1717: truncated transposase; ECSF_1092; phage(gi209447151)  8e-14  Click
62 1185490..1185840  PHAGE_Stx2_c_1717: transposase; ECSF_1093; phage(gi209447152)  1e-40  Click
63 1185871..1187484  PHAGE_Stx2_c_1717: transposase; ECSF_1094; phage(gi209447153)  0.0  Click
64 1187652..1187930  PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; ECSF_1095; phage(gi388570496)  6e-07  Click
65 1187943..1188236  PHAGE_Halomo_1: hypothetical protein HAPgp19; ECSF_1096; phage(gi167832364)  2e-07  Click
66 complement(1188328..1189185)  iron ABC transporter permease component; ECSF_1097  N/A  Click
67 complement(1189182..1190039)  iron ABC transporter permease component; ECSF_1098  N/A  Click
68 complement(1190036..1190863)  PHAGE_Plankt_PaV_LD: ABC transporter; ECSF_1099; phage(gi371496158)  1e-13  Click
69 1196151..1196163  attR    TTTGCTATTGTTA  N/A  Click
70 1202880..1202894  attR    GGCTTATTTCAGCTC  N/A  Click