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The map label for this gene is rplJ

Identifier: 239618204

GI number: 239618204

Start: 1974699

End: 1975238

Strand: Reverse

Name: rplJ

Synonym: Kole_1840

Alternate gene names: 239618204

Gene position: 1975238-1974699 (Counterclockwise)

Preceding gene: 239618205

Following gene: 239618203

Centisome position: 85.8

GC content: 44.63

Gene sequence:

>540_bases
ATGCTCACAAGAGCCAAAAAGGAACAACTTGTCCAGGAAATGACCGATAGATTTTCCAAAGCATCCCTTATTCTCTTCAC
CGATTACAAGGGCATGGATGTTCAAACAATCTCCGAACTCAGAGGACAGTTGTACGAAAAATTCGAAGATAAAGCCCGTT
ATCAGGTTGCCAAAAATACGCTCATCAGACTGGCGTTGAGAAACGCGTCTTACGAAGAAGAAGAATGGAAAGAGCAGGTT
ACCGGGACAACAGCTATCCTTACCATAGTCGATGCCGATCCAATTGAGGCGATTAAAATCGTCTACGATTTCTCCAAGAA
AAAGAAGCTCCCTGTTTTGAGAGGATGCTACCTGGAGAAAGTGTTCCACGATGAAAGCAAGATTCCGGATCTGGCACAGC
TACCGTCCAGAGAGCAGCTTATTGCTATGGTCGTCAGTGGTTTTGCCGCCCCAATTTCTGGTCTCGTGTACTCGCTGAAC
GGTATCATCAGCAAGCTTGTTTACGCGCTTAACGCTATAAAAGATAAGAAATCAGAATAA

Upstream 100 bases:

>100_bases
TACCGCCTACCGAGGTACGCGGAAAAGATTGAAAGAATAATTTTTCACATATTTCTGCGGCCTCAATGGCCGCTTTTTTT
GAAAGGAGGTGCAACAGCGG

Downstream 100 bases:

>100_bases
TTCTTATGGAGGTGTGTTATAATGACGAAGGAAGAACTTATTCAGGCTATTAAAGAAATGACAGTTGCTGAACTCGCAGA
GCTCGTTAAGGCTCTTGAAG

Product: 50S ribosomal protein L10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLTRAKKEQLVQEMTDRFSKASLILFTDYKGMDVQTISELRGQLYEKFEDKARYQVAKNTLIRLALRNASYEEEEWKEQV
TGTTAILTIVDADPIEAIKIVYDFSKKKKLPVLRGCYLEKVFHDESKIPDLAQLPSREQLIAMVVSGFAAPISGLVYSLN
GIISKLVYALNAIKDKKSE

Sequences:

>Translated_179_residues
MLTRAKKEQLVQEMTDRFSKASLILFTDYKGMDVQTISELRGQLYEKFEDKARYQVAKNTLIRLALRNASYEEEEWKEQV
TGTTAILTIVDADPIEAIKIVYDFSKKKKLPVLRGCYLEKVFHDESKIPDLAQLPSREQLIAMVVSGFAAPISGLVYSLN
GIISKLVYALNAIKDKKSE
>Mature_179_residues
MLTRAKKEQLVQEMTDRFSKASLILFTDYKGMDVQTISELRGQLYEKFEDKARYQVAKNTLIRLALRNASYEEEEWKEQV
TGTTAILTIVDADPIEAIKIVYDFSKKKKLPVLRGCYLEKVFHDESKIPDLAQLPSREQLIAMVVSGFAAPISGLVYSLN
GIISKLVYALNAIKDKKSE

Specific function: Unknown

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL10_KOSOT (C5CGE1)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941526.1
- GeneID:   7967760
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1840
- ProtClustDB:   PRK00099
- GO:   GO:0005840
- HAMAP:   MF_00362
- InterPro:   IPR022973
- InterPro:   IPR001790

Pfam domain/function: PF00466 Ribosomal_L10

EC number: NA

Molecular weight: Translated: 20355; Mature: 20355

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS01109 RIBOSOMAL_L10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRAKKEQLVQEMTDRFSKASLILFTDYKGMDVQTISELRGQLYEKFEDKARYQVAKNT
CCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIRLALRNASYEEEEWKEQVTGTTAILTIVDADPIEAIKIVYDFSKKKKLPVLRGCYLEK
HHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
VFHDESKIPDLAQLPSREQLIAMVVSGFAAPISGLVYSLNGIISKLVYALNAIKDKKSE
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTRAKKEQLVQEMTDRFSKASLILFTDYKGMDVQTISELRGQLYEKFEDKARYQVAKNT
CCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIRLALRNASYEEEEWKEQVTGTTAILTIVDADPIEAIKIVYDFSKKKKLPVLRGCYLEK
HHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
VFHDESKIPDLAQLPSREQLIAMVVSGFAAPISGLVYSLNGIISKLVYALNAIKDKKSE
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA