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The map label for this gene is istA [H]

Identifier: 239618163

GI number: 239618163

Start: 1924041

End: 1925516

Strand: Reverse

Name: istA [H]

Synonym: Kole_1797

Alternate gene names: 239618163

Gene position: 1925516-1924041 (Counterclockwise)

Preceding gene: 239618169

Following gene: 239618162

Centisome position: 83.64

GC content: 41.19

Gene sequence:

>1476_bases
ATGATCCAGGTACATCATATCAAATATCTACGTGAATTTAAAGGGAAGTCGCTAAGAAATATAGCCAACGAAACTGGCCA
CGATTTCAGAACGGTGAAGAAATATGACGAAATGGATGATTTCAACGAGTATGTTCAACGTAGAAAGAGGACTTCCAAGC
TCGATCCGTACAAGCCCAAAATAGATGAATGGCTGGAAGAAGATAAAAAGGTAAAGGCAAAACAACGTCATACTGCTAGA
AGGATTTACAAGAGACTATGTGAGGAATATCCGAATTTTCCGCTCAGCGAACGTACGGTAAGAGCATATGTGAGAAAGAA
AAAGAAGGAATTGTATTCCAACGAAGGTTATTTACCTCTTGACCATCCTGGTGGTGAAGCTCAAGCAGATTTTGGACAGG
CTGAGTTCATTGAAAAGGGTAAGGGAACGACGCTGCATTATCTGAATCTTTCTTTTCCATACAGCAACGGGGGATACTTT
CAACTGTTTAGAGGGGAAAACCTTGAATGTTTGCTCGAGGGGCTGAAGAACATATTCGAACATATTGGAAAGGTTCCTCG
GCGTATATGGTTCGACAACCTATCTCCCGTGGTGAAAAAAATTCTGGATGGAGGGGAAAGGGAGGTAACGGAGAAGTTTT
ACAGATTCTGTCAACATTATGGTTTTGAACCTGTGTTTTGTAATCCTGGTTGTGGCAATGAAAAAGGCAATGTGGAAAAC
AAGGTTGGATATAACAGGCGGAACTTCTTTGTTCCCATACCCAGGATAGAGAATCTTGAAGATTACAACAAAGAGCTCTT
AATCCTCTCGGAGAAAGATATGGAAAGACCCCATTACCGAAAGGAAAAGAGCATTAAAGAACTGTTTTTAGAAGAAAAGA
AAAAGATGCTCCTACTCAACGAAAAACCTCTGGATATTTCCAGGGTACAGAAAGCAAAGACAGACAAGTATGGGATGCTT
CGTTTTGAAAACAACAGATACTCCGTGTCACCAAAACATACTGAAACAGAAGTGTGGTTGAAGATAGGGGCATCGGAAAT
AGAGATACTGGATGAAGACTACAAAGTGCTCGTAAAACATCCCAGGTTATACGGACACAACCTCCAATCTCTGAATTGGT
ATCCATACCTTGAGACATTAAGCAGAAGACCGCGTGCGTTGAAATACACAGGATTTTACAGGGAATTATCTCCTATTTGG
CAAGAATACTTTGAATCCTGTGATTACCAGGAAAAGAAAAACAGCCTGAAATTGCTGGTCAAAATGCTACGTGAAACAGA
TATGGAAACCGCGAGATATGCACTGGAGATAAGCCAGAATAGTGAACGTTGCACTGCTGAGACGATATTCCTATCGTACC
GACGGTTGATCCAGGAAGAACCATCACCTTTTGAAACAGGGAACGAAGTACCGAGATTACAAGCATATACAACCGATTTT
AAAGAATACGATGCCCTGGTGGGTGAAAGGAAATGA

Upstream 100 bases:

>100_bases
GGTAAGGGAAAGAAAAAGATCATTGCCAGCATCCGGAAAATCCATTACCCTTTAATTGCACACCAAAACAGTTAAAGGGG
GTTAGAAAGGAGTGCTGACA

Downstream 100 bases:

>100_bases
AAGAACTCATCGCTCAATACTGCAAAGAACTGAGATTGGGAAAAAGTATAGTGGAAAACTACCAAAAGATACAGGCAGAA
ACCAACGAGGAATTCCTGGT

Product: transposase (25)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MIQVHHIKYLREFKGKSLRNIANETGHDFRTVKKYDEMDDFNEYVQRRKRTSKLDPYKPKIDEWLEEDKKVKAKQRHTAR
RIYKRLCEEYPNFPLSERTVRAYVRKKKKELYSNEGYLPLDHPGGEAQADFGQAEFIEKGKGTTLHYLNLSFPYSNGGYF
QLFRGENLECLLEGLKNIFEHIGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCQHYGFEPVFCNPGCGNEKGNVEN
KVGYNRRNFFVPIPRIENLEDYNKELLILSEKDMERPHYRKEKSIKELFLEEKKKMLLLNEKPLDISRVQKAKTDKYGML
RFENNRYSVSPKHTETEVWLKIGASEIEILDEDYKVLVKHPRLYGHNLQSLNWYPYLETLSRRPRALKYTGFYRELSPIW
QEYFESCDYQEKKNSLKLLVKMLRETDMETARYALEISQNSERCTAETIFLSYRRLIQEEPSPFETGNEVPRLQAYTTDF
KEYDALVGERK

Sequences:

>Translated_491_residues
MIQVHHIKYLREFKGKSLRNIANETGHDFRTVKKYDEMDDFNEYVQRRKRTSKLDPYKPKIDEWLEEDKKVKAKQRHTAR
RIYKRLCEEYPNFPLSERTVRAYVRKKKKELYSNEGYLPLDHPGGEAQADFGQAEFIEKGKGTTLHYLNLSFPYSNGGYF
QLFRGENLECLLEGLKNIFEHIGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCQHYGFEPVFCNPGCGNEKGNVEN
KVGYNRRNFFVPIPRIENLEDYNKELLILSEKDMERPHYRKEKSIKELFLEEKKKMLLLNEKPLDISRVQKAKTDKYGML
RFENNRYSVSPKHTETEVWLKIGASEIEILDEDYKVLVKHPRLYGHNLQSLNWYPYLETLSRRPRALKYTGFYRELSPIW
QEYFESCDYQEKKNSLKLLVKMLRETDMETARYALEISQNSERCTAETIFLSYRRLIQEEPSPFETGNEVPRLQAYTTDF
KEYDALVGERK
>Mature_491_residues
MIQVHHIKYLREFKGKSLRNIANETGHDFRTVKKYDEMDDFNEYVQRRKRTSKLDPYKPKIDEWLEEDKKVKAKQRHTAR
RIYKRLCEEYPNFPLSERTVRAYVRKKKKELYSNEGYLPLDHPGGEAQADFGQAEFIEKGKGTTLHYLNLSFPYSNGGYF
QLFRGENLECLLEGLKNIFEHIGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCQHYGFEPVFCNPGCGNEKGNVEN
KVGYNRRNFFVPIPRIENLEDYNKELLILSEKDMERPHYRKEKSIKELFLEEKKKMLLLNEKPLDISRVQKAKTDKYGML
RFENNRYSVSPKHTETEVWLKIGASEIEILDEDYKVLVKHPRLYGHNLQSLNWYPYLETLSRRPRALKYTGFYRELSPIW
QEYFESCDYQEKKNSLKLLVKMLRETDMETARYALEISQNSERCTAETIFLSYRRLIQEEPSPFETGNEVPRLQAYTTDF
KEYDALVGERK

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58644; Mature: 58644

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVHHIKYLREFKGKSLRNIANETGHDFRTVKKYDEMDDFNEYVQRRKRTSKLDPYKPK
CEEEHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
IDEWLEEDKKVKAKQRHTARRIYKRLCEEYPNFPLSERTVRAYVRKKKKELYSNEGYLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECC
DHPGGEAQADFGQAEFIEKGKGTTLHYLNLSFPYSNGGYFQLFRGENLECLLEGLKNIFE
CCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHH
HIGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCQHYGFEPVFCNPGCGNEKGNVEN
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCH
KVGYNRRNFFVPIPRIENLEDYNKELLILSEKDMERPHYRKEKSIKELFLEEKKKMLLLN
HCCCCCCCEEEECCCCCCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEC
EKPLDISRVQKAKTDKYGMLRFENNRYSVSPKHTETEVWLKIGASEIEILDEDYKVLVKH
CCCCCHHHHHHHCCCCCCEEEEECCEEECCCCCCCCEEEEEECCHHHHHHCCCHHHHHHC
PRLYGHNLQSLNWYPYLETLSRRPRALKYTGFYRELSPIWQEYFESCDYQEKKNSLKLLV
CHHHCCCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KMLRETDMETARYALEISQNSERCTAETIFLSYRRLIQEEPSPFETGNEVPRLQAYTTDF
HHHHHCCHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCH
KEYDALVGERK
HHHHHHHCCCC
>Mature Secondary Structure
MIQVHHIKYLREFKGKSLRNIANETGHDFRTVKKYDEMDDFNEYVQRRKRTSKLDPYKPK
CEEEHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
IDEWLEEDKKVKAKQRHTARRIYKRLCEEYPNFPLSERTVRAYVRKKKKELYSNEGYLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEECC
DHPGGEAQADFGQAEFIEKGKGTTLHYLNLSFPYSNGGYFQLFRGENLECLLEGLKNIFE
CCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHH
HIGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCQHYGFEPVFCNPGCGNEKGNVEN
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCH
KVGYNRRNFFVPIPRIENLEDYNKELLILSEKDMERPHYRKEKSIKELFLEEKKKMLLLN
HCCCCCCCEEEECCCCCCCHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEC
EKPLDISRVQKAKTDKYGMLRFENNRYSVSPKHTETEVWLKIGASEIEILDEDYKVLVKH
CCCCCHHHHHHHCCCCCCEEEEECCEEECCCCCCCCEEEEEECCHHHHHHCCCHHHHHHC
PRLYGHNLQSLNWYPYLETLSRRPRALKYTGFYRELSPIWQEYFESCDYQEKKNSLKLLV
CHHHCCCCCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KMLRETDMETARYALEISQNSERCTAETIFLSYRRLIQEEPSPFETGNEVPRLQAYTTDF
HHHHHCCHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCH
KEYDALVGERK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755869 [H]