| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is ttuD [H]
Identifier: 239618135
GI number: 239618135
Start: 1898829
End: 1900076
Strand: Reverse
Name: ttuD [H]
Synonym: Kole_1768
Alternate gene names: 239618135
Gene position: 1900076-1898829 (Counterclockwise)
Preceding gene: 239618136
Following gene: 239618134
Centisome position: 82.54
GC content: 44.55
Gene sequence:
>1248_bases TTGTCAGATCTCAGAAATGACGCTTTAGATATCATTGATTATTCCATTAAGGCTGTTCTTCCTGACAACGCGGTAAAAGA AGCGATAAAAAAGAGAAAACTCCCGGATAAAATAGTTCTTGTAGCAATTGGAAAAGCCGCCTGGCGGATGGCAAAAGCCG CTCATGAAATTGTTGGCGATAAAATCAAATCTGGCGTTGTAATCACAAAATACCATCACAGCCAGGGGAAAATCGGAGAT TTGAAGATATTTGAAGCAGGGCACCCTGTCCCCGATGAAAATACTATAAAAGCCAGCAGTGAAGCTCTCAAAATGGTCTC AAATCTTTCTCCGGAAGACACCGTCCTATTTCTTGTTTCGGGAGGCGGTTCCGCATTATTTGAGGTTCCTCAGGAAGGTG TAACCCTTGAAGATCTGACAGGCGTAACAAACCAGCTTTTAAGATCAGGTGCAGATATAGTTGAAATAAATACAATAAGA AAACGATTGTCGGCGGTTAAAGGGGGGCGCTTTGCCCTCCTTTGCAAGCCGGCAAAAGTTTTGGCGCTGGTTCTCTCAGA CGTTTTAGGTGATAGATTGGATAGCATAGCTTCCGGTCCGGCATACCCTGATTCAACCACATGGGAAGATGCCATAAGAA TCATTCAAAAGTACGGTATTCAACTACGTCCAGAACTTCTCAAAGTATTGAAAAACGAAACCCCGAAATCTCTTGACAAT GTTGAAACAGAGATAATAGGCAGCGTATCCAGAGTATGTGAAGTAGCTGCAGAAAGGGCAAAAATGCTCGGTTACGAACC TATGATTTTCACCACAACGCTTGACTGTGAAGCACGGGAAGCCGGAAGCTTCATAGCGGCGATAATACGCGAGGTCGTTA CCAGCAGTCGCCCCTTAAAGAAACCCTGTGCATTAATTTTCGGTGGAGAAACGGTGGTTCACGTCCGCGGTAATGGAAAA GGTGGAAGAAACCAAGAGTTAGCACTGGCAGCAGCAACAAAAATAGAGGGATTAAGAGAAGTGGTTATCGCCTCGGTAGG TACTGACGGGACTGATGGACCAACGGATGCAGCTGGTGGGATCGCTGATGGAAATACAGCCCAAAAACTCAAGAAAAAAG GAATAAATATCGAAAGCGCTCTTGCCAACAATGACTCCTATCACGCTCTCGATGCTGTTGGCAGCTTAATAAAAACAGGC CCTACAGGTACTAATGTCAATGACCTCATAATCGCTCTTTGCAAATAA
Upstream 100 bases:
>100_bases TTATAGGTTGCAAACCCTGGGCACCCTGCTTGAAGGGTTGACGGCTGCGGTGCTGGTATGGATAATAAGCCTTGGAGTTT TATAATTGGAGGCGAAAAGC
Downstream 100 bases:
>100_bases TACAAGATATAAGGAGTAGAGAATTGAAAAATAAAGGAACATACGAAGTTTACGTTGATGGAAGTTTTTTCAACGATTGT GTTAGTTATGCAGCTGTAAT
Product: Hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSDLRNDALDIIDYSIKAVLPDNAVKEAIKKRKLPDKIVLVAIGKAAWRMAKAAHEIVGDKIKSGVVITKYHHSQGKIGD LKIFEAGHPVPDENTIKASSEALKMVSNLSPEDTVLFLVSGGGSALFEVPQEGVTLEDLTGVTNQLLRSGADIVEINTIR KRLSAVKGGRFALLCKPAKVLALVLSDVLGDRLDSIASGPAYPDSTTWEDAIRIIQKYGIQLRPELLKVLKNETPKSLDN VETEIIGSVSRVCEVAAERAKMLGYEPMIFTTTLDCEAREAGSFIAAIIREVVTSSRPLKKPCALIFGGETVVHVRGNGK GGRNQELALAAATKIEGLREVVIASVGTDGTDGPTDAAGGIADGNTAQKLKKKGINIESALANNDSYHALDAVGSLIKTG PTGTNVNDLIIALCK
Sequences:
>Translated_415_residues MSDLRNDALDIIDYSIKAVLPDNAVKEAIKKRKLPDKIVLVAIGKAAWRMAKAAHEIVGDKIKSGVVITKYHHSQGKIGD LKIFEAGHPVPDENTIKASSEALKMVSNLSPEDTVLFLVSGGGSALFEVPQEGVTLEDLTGVTNQLLRSGADIVEINTIR KRLSAVKGGRFALLCKPAKVLALVLSDVLGDRLDSIASGPAYPDSTTWEDAIRIIQKYGIQLRPELLKVLKNETPKSLDN VETEIIGSVSRVCEVAAERAKMLGYEPMIFTTTLDCEAREAGSFIAAIIREVVTSSRPLKKPCALIFGGETVVHVRGNGK GGRNQELALAAATKIEGLREVVIASVGTDGTDGPTDAAGGIADGNTAQKLKKKGINIESALANNDSYHALDAVGSLIKTG PTGTNVNDLIIALCK >Mature_414_residues SDLRNDALDIIDYSIKAVLPDNAVKEAIKKRKLPDKIVLVAIGKAAWRMAKAAHEIVGDKIKSGVVITKYHHSQGKIGDL KIFEAGHPVPDENTIKASSEALKMVSNLSPEDTVLFLVSGGGSALFEVPQEGVTLEDLTGVTNQLLRSGADIVEINTIRK RLSAVKGGRFALLCKPAKVLALVLSDVLGDRLDSIASGPAYPDSTTWEDAIRIIQKYGIQLRPELLKVLKNETPKSLDNV ETEIIGSVSRVCEVAAERAKMLGYEPMIFTTTLDCEAREAGSFIAAIIREVVTSSRPLKKPCALIFGGETVVHVRGNGKG GRNQELALAAATKIEGLREVVIASVGTDGTDGPTDAAGGIADGNTAQKLKKKGINIESALANNDSYHALDAVGSLIKTGP TGTNVNDLIIALCK
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=483, Percent_Identity=31.4699792960663, Blast_Score=198, Evalue=9e-51, Organism=Caenorhabditis elegans, GI193205461, Length=409, Percent_Identity=34.718826405868, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI19920578, Length=453, Percent_Identity=31.3465783664459, Blast_Score=174, Evalue=8e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 44089; Mature: 43958
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLRNDALDIIDYSIKAVLPDNAVKEAIKKRKLPDKIVLVAIGKAAWRMAKAAHEIVGD CCCHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHH KIKSGVVITKYHHSQGKIGDLKIFEAGHPVPDENTIKASSEALKMVSNLSPEDTVLFLVS HHHCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE GGGSALFEVPQEGVTLEDLTGVTNQLLRSGADIVEINTIRKRLSAVKGGRFALLCKPAKV CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCEEEEECHHHH LALVLSDVLGDRLDSIASGPAYPDSTTWEDAIRIIQKYGIQLRPELLKVLKNETPKSLDN HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH VETEIIGSVSRVCEVAAERAKMLGYEPMIFTTTLDCEAREAGSFIAAIIREVVTSSRPLK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC KPCALIFGGETVVHVRGNGKGGRNQELALAAATKIEGLREVVIASVGTDGTDGPTDAAGG CCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IADGNTAQKLKKKGINIESALANNDSYHALDAVGSLIKTGPTGTNVNDLIIALCK CCCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEECC >Mature Secondary Structure SDLRNDALDIIDYSIKAVLPDNAVKEAIKKRKLPDKIVLVAIGKAAWRMAKAAHEIVGD CCHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHH KIKSGVVITKYHHSQGKIGDLKIFEAGHPVPDENTIKASSEALKMVSNLSPEDTVLFLVS HHHCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE GGGSALFEVPQEGVTLEDLTGVTNQLLRSGADIVEINTIRKRLSAVKGGRFALLCKPAKV CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCEEEEECHHHH LALVLSDVLGDRLDSIASGPAYPDSTTWEDAIRIIQKYGIQLRPELLKVLKNETPKSLDN HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH VETEIIGSVSRVCEVAAERAKMLGYEPMIFTTTLDCEAREAGSFIAAIIREVVTSSRPLK HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC KPCALIFGGETVVHVRGNGKGGRNQELALAAATKIEGLREVVIASVGTDGTDGPTDAAGG CCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IADGNTAQKLKKKGINIESALANNDSYHALDAVGSLIKTGPTGTNVNDLIIALCK CCCCHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]