| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is pyrH [H]
Identifier: 239618074
GI number: 239618074
Start: 1836027
End: 1836728
Strand: Reverse
Name: pyrH [H]
Synonym: Kole_1706
Alternate gene names: 239618074
Gene position: 1836728-1836027 (Counterclockwise)
Preceding gene: 239618075
Following gene: 239618073
Centisome position: 79.78
GC content: 43.3
Gene sequence:
>702_bases ATGTACAGGAGAGTATTGTTAAAACTCAGTGGTGAAGCCCTTAGTGGCGAGGGCAATAAAGGATTCAGCGAAGAAAGGTT ACAATATCTCGTTAACGAACTTCGCGGCGTAAAGGAACGTGGAATCGAGATTGCAATCGTCATAGGTGCAGGCAACCTCT TCCGAGGCAAAGAGCTAACACATATTTCTCCCACCGTATCCGACGAGATCGGGATGTTGGGAACCCTGATTAACACACTC TATCTGAAGGATTATCTCTCTTCAAAGGGATTGAAAGCGGTGGCAATTTCATCGATTGTCTCGTTCCCATCTTTCGAGCC TTACAAATACAGCAGAGCAGAACAACTTCTGAGGGAAGGAAACATCGTTATTCTCGGTGGAGGAACGACAATTCCCTACT TCACCACCGATACCGCAGCCGCTATCAGAGCAATTGAACTTCATACTGACATCATAATAAAAGCCACCAAGGTTGACGGT GTATACGAACTCGATCCAAAGAAACATCCTGACACGAAAAAAATCGACAGAATCACTTTCACCGAAGCAATTGAACGGGA TTTAAAGATAATGGATATAGAAGCTTTTTCCATTTGCAAAAAACATAAAATACCTATCATCGTTATCGATTTCTTTACCA GCGGAAATCTGCTGCGTGCTATAATTGGCGAGAAAGTTGGTACTCTGGTAATTCCCGACTGA
Upstream 100 bases:
>100_bases ATAAAGGTTAGCAGATTTGTTAGATGGGAAGTTGGGGAAAGCGATTAATAATGAAAGATAAAGAGGTGGGCATTGCTCAC CTCTTTTTTTGGAGGGTGCT
Downstream 100 bases:
>100_bases ATACAGGAGGTGTTAATATGTACGCCCAGATAGTTGATGTAATCGCAAGAGAGGTTCTCGATTCACGCGGAACACCAACA GTAGAAGTTGAAGTCTGGCT
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MYRRVLLKLSGEALSGEGNKGFSEERLQYLVNELRGVKERGIEIAIVIGAGNLFRGKELTHISPTVSDEIGMLGTLINTL YLKDYLSSKGLKAVAISSIVSFPSFEPYKYSRAEQLLREGNIVILGGGTTIPYFTTDTAAAIRAIELHTDIIIKATKVDG VYELDPKKHPDTKKIDRITFTEAIERDLKIMDIEAFSICKKHKIPIIVIDFFTSGNLLRAIIGEKVGTLVIPD
Sequences:
>Translated_233_residues MYRRVLLKLSGEALSGEGNKGFSEERLQYLVNELRGVKERGIEIAIVIGAGNLFRGKELTHISPTVSDEIGMLGTLINTL YLKDYLSSKGLKAVAISSIVSFPSFEPYKYSRAEQLLREGNIVILGGGTTIPYFTTDTAAAIRAIELHTDIIIKATKVDG VYELDPKKHPDTKKIDRITFTEAIERDLKIMDIEAFSICKKHKIPIIVIDFFTSGNLLRAIIGEKVGTLVIPD >Mature_233_residues MYRRVLLKLSGEALSGEGNKGFSEERLQYLVNELRGVKERGIEIAIVIGAGNLFRGKELTHISPTVSDEIGMLGTLINTL YLKDYLSSKGLKAVAISSIVSFPSFEPYKYSRAEQLLREGNIVILGGGTTIPYFTTDTAAAIRAIELHTDIIIKATKVDG VYELDPKKHPDTKKIDRITFTEAIERDLKIMDIEAFSICKKHKIPIIVIDFFTSGNLLRAIIGEKVGTLVIPD
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=232, Percent_Identity=41.8103448275862, Blast_Score=194, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 25798; Mature: 25798
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRRVLLKLSGEALSGEGNKGFSEERLQYLVNELRGVKERGIEIAIVIGAGNLFRGKELT CCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCE HISPTVSDEIGMLGTLINTLYLKDYLSSKGLKAVAISSIVSFPSFEPYKYSRAEQLLREG EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC NIVILGGGTTIPYFTTDTAAAIRAIELHTDIIIKATKVDGVYELDPKKHPDTKKIDRITF CEEEEECCCCCCEEECCHHHHHEEEEEECEEEEEEEECCCEEEECCCCCCCCHHHHHHHH TEAIERDLKIMDIEAFSICKKHKIPIIVIDFFTSGNLLRAIIGEKVGTLVIPD HHHHHCCCEEEEEHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEECC >Mature Secondary Structure MYRRVLLKLSGEALSGEGNKGFSEERLQYLVNELRGVKERGIEIAIVIGAGNLFRGKELT CCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEECCCCCE HISPTVSDEIGMLGTLINTLYLKDYLSSKGLKAVAISSIVSFPSFEPYKYSRAEQLLREG EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCC NIVILGGGTTIPYFTTDTAAAIRAIELHTDIIIKATKVDGVYELDPKKHPDTKKIDRITF CEEEEECCCCCCEEECCHHHHHEEEEEECEEEEEEEECCCEEEECCCCCCCCHHHHHHHH TEAIERDLKIMDIEAFSICKKHKIPIIVIDFFTSGNLLRAIIGEKVGTLVIPD HHHHHCCCEEEEEHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA