| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yufN [H]
Identifier: 239617926
GI number: 239617926
Start: 1667454
End: 1668479
Strand: Reverse
Name: yufN [H]
Synonym: Kole_1554
Alternate gene names: 239617926
Gene position: 1668479-1667454 (Counterclockwise)
Preceding gene: 239617927
Following gene: 239617925
Centisome position: 72.48
GC content: 47.27
Gene sequence:
>1026_bases ATGAAAATGAGAACTCTGCTTGTTCTCTCGTTAGTTTTGCTTGTTGCACTACCAGTTTTTGCCATGAAAGTCATCATGGT TACTGACGTAGGAGGTCTTGGTGATAAGTCCTTTAACGATGGTACATGGGCCGGTATCCAGCAAGCTGCCGAATTCCTTG GCATCGAAGCTGAAGTTGTTCAATCACATGAAATGGCTGACTACATTTCCAATCTCTCCAATGCAGCTAAAGAAGCGGAT ATCGTCTTTGCTGTTGGATTCATGATGACCGACGCTCTCTTCAAGGTAGCACCCCAGTTCCCGGATACCTACTTTATAGG TATAGACATCGTTCCGCCGGAGGGTGTAGAAGCCGATAACGTTGCTTGTTACATCTTCAAAGAACAGGAAGGTGCTTTCC TCGTTGGATATCTCGCCGCTGCAATGACCAAAACAAATATCGTAGGTTTCATTGGTGGAATTCCGATACCACCCGTTGAA AGATTCCGCTACGGGTACGAAGCCGGTATAAGGGTCTACGAAGAACTCCACGGTAAAACAATAGAAATCCTCAGAGGCTA CACCATGGACTTCAACGATCCTAAGAAAGGTAAAGACCTCGCTCTTGCACAGTTTGCAGAAGGCGCAGATATTGTTTTCC ACGCTTCCGGTGCATGTGGAAACGGCGTCATTGAAGCTGCCGCAGAAAAAGGTGAAGGTTACTTCGCTATCGGTGTTGAC GCTGACCAGGATTACATGGCCCCTGGAAGAGTCCTGACAAGTTCAATGAAGAGAGTCGATGTTGCCGCTTATCAGGCGGT CCTCAGCGTTGCACTCGGTACATTCACACCCGGTCTCCACATTCTTGGCATCAAGGATGAAGGTGTGGGTATAAGTCCGA TGACATACACGAAGCACCTCGTTCCACCTCAGGTCTTGAAGGAACTTGATTTCCTCAAGGAAGAGATAAAGAAAGGTATT CTGGTTGTTCCAGATACCCAGGAAGCTCTTGATGCCTTTGAAGTTCCCGCTATTACTCTTCCGTGA
Upstream 100 bases:
>100_bases GCACTGGACTGAACGTTTGGTTTTTAATCGTCTTTGTCGGTATAATTGTACTGTCAATCTTTACCGTTATTTCATCTTAC ATGAAGGGGAGGGAAAGAGT
Downstream 100 bases:
>100_bases TTGAGGTAAGGTTTAATCAGGGGTGCGTTTAGCGCACCCCCTTGTTCTGAATCGTTACCTTGCCAAAGCTCGGGAGAGTA ATCTCCCGAGTTTTGGTATC
Product: basic membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKMRTLLVLSLVLLVALPVFAMKVIMVTDVGGLGDKSFNDGTWAGIQQAAEFLGIEAEVVQSHEMADYISNLSNAAKEAD IVFAVGFMMTDALFKVAPQFPDTYFIGIDIVPPEGVEADNVACYIFKEQEGAFLVGYLAAAMTKTNIVGFIGGIPIPPVE RFRYGYEAGIRVYEELHGKTIEILRGYTMDFNDPKKGKDLALAQFAEGADIVFHASGACGNGVIEAAAEKGEGYFAIGVD ADQDYMAPGRVLTSSMKRVDVAAYQAVLSVALGTFTPGLHILGIKDEGVGISPMTYTKHLVPPQVLKELDFLKEEIKKGI LVVPDTQEALDAFEVPAITLP
Sequences:
>Translated_341_residues MKMRTLLVLSLVLLVALPVFAMKVIMVTDVGGLGDKSFNDGTWAGIQQAAEFLGIEAEVVQSHEMADYISNLSNAAKEAD IVFAVGFMMTDALFKVAPQFPDTYFIGIDIVPPEGVEADNVACYIFKEQEGAFLVGYLAAAMTKTNIVGFIGGIPIPPVE RFRYGYEAGIRVYEELHGKTIEILRGYTMDFNDPKKGKDLALAQFAEGADIVFHASGACGNGVIEAAAEKGEGYFAIGVD ADQDYMAPGRVLTSSMKRVDVAAYQAVLSVALGTFTPGLHILGIKDEGVGISPMTYTKHLVPPQVLKELDFLKEEIKKGI LVVPDTQEALDAFEVPAITLP >Mature_341_residues MKMRTLLVLSLVLLVALPVFAMKVIMVTDVGGLGDKSFNDGTWAGIQQAAEFLGIEAEVVQSHEMADYISNLSNAAKEAD IVFAVGFMMTDALFKVAPQFPDTYFIGIDIVPPEGVEADNVACYIFKEQEGAFLVGYLAAAMTKTNIVGFIGGIPIPPVE RFRYGYEAGIRVYEELHGKTIEILRGYTMDFNDPKKGKDLALAQFAEGADIVFHASGACGNGVIEAAAEKGEGYFAIGVD ADQDYMAPGRVLTSSMKRVDVAAYQAVLSVALGTFTPGLHILGIKDEGVGISPMTYTKHLVPPQVLKELDFLKEEIKKGI LVVPDTQEALDAFEVPAITLP
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 36726; Mature: 36726
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMRTLLVLSLVLLVALPVFAMKVIMVTDVGGLGDKSFNDGTWAGIQQAAEFLGIEAEVV CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH QSHEMADYISNLSNAAKEADIVFAVGFMMTDALFKVAPQFPDTYFIGIDIVPPEGVEADN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCC VACYIFKEQEGAFLVGYLAAAMTKTNIVGFIGGIPIPPVERFRYGYEAGIRVYEELHGKT EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCE IEILRGYTMDFNDPKKGKDLALAQFAEGADIVFHASGACGNGVIEAAAEKGEGYFAIGVD EEEHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECC ADQDYMAPGRVLTSSMKRVDVAAYQAVLSVALGTFTPGLHILGIKDEGVGISPMTYTKHL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHC VPPQVLKELDFLKEEIKKGILVVPDTQEALDAFEVPAITLP CCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCEEECC >Mature Secondary Structure MKMRTLLVLSLVLLVALPVFAMKVIMVTDVGGLGDKSFNDGTWAGIQQAAEFLGIEAEVV CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH QSHEMADYISNLSNAAKEADIVFAVGFMMTDALFKVAPQFPDTYFIGIDIVPPEGVEADN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCC VACYIFKEQEGAFLVGYLAAAMTKTNIVGFIGGIPIPPVERFRYGYEAGIRVYEELHGKT EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCE IEILRGYTMDFNDPKKGKDLALAQFAEGADIVFHASGACGNGVIEAAAEKGEGYFAIGVD EEEHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECC ADQDYMAPGRVLTSSMKRVDVAAYQAVLSVALGTFTPGLHILGIKDEGVGISPMTYTKHL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHC VPPQVLKELDFLKEEIKKGILVVPDTQEALDAFEVPAITLP CCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]