| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is punA [H]
Identifier: 239617848
GI number: 239617848
Start: 1572785
End: 1573591
Strand: Reverse
Name: punA [H]
Synonym: Kole_1474
Alternate gene names: 239617848
Gene position: 1573591-1572785 (Counterclockwise)
Preceding gene: 239617854
Following gene: 239617847
Centisome position: 68.35
GC content: 40.64
Gene sequence:
>807_bases ATGAAAGACTACAAAAAACTTGCAAAACACCTTCTTGAACGCACAAACGTAAAGCCTGAATTCGCTCTGATTCTTGGATC TGGATTGGGATATCTAACAAAATATTTTGAAGATTCCCATGCTATTTCATATTCCGAACTGGAAGGTTTTCCTCAAAGTA CTGTTGAAGGACACGCAGGAAGATTCGTTCTCGGAAAATTCCATGGAAAAAACGTTATAGCCATGGACGGTCGTTTCCAC TATTATGAAGGCCACGAAATAAAAGATGTTGTGACACCGATCTATGTTTTCAAAGAAATGGGAATTTCGCGTCTCATAAT AACCAATGCCGCAGGTGGTATAAATCGTTCCTTCGAACCCGGAGATATAGTGGCAATAACAGATATTATAAATTTCGCTT TCAGAAATCCACTCATCGGCCCTAATGACGAAAGATACGGTGTCAGATTTCCTGATATGTCGAAAACAATCGACTTCGAT TGGCTTGAAAAAGTCGAAAAAACTGCTGAATCCAGGGGAATAAAACTAAAACGCGGAACATATGTGTGGGTTACCGGTCC ATCCTACGAAACACCAGCCGAGATAAAGGCTTACGAATTTTCGGGAGCTGACATGGTTGGAATGTCAACAGTTCCTGAGA TAATTGCCGCGAGACATTGCGGTATAAATCTCATAGCTTTTTCTTGCATAACGAACATGGCTTCAGGTATATTAGACAAA AAACTCGTCCATGAAGAGGTTGTCCAGACAGCTCAAAGAGTCAAAAGCGCTTTCAGCAAAGTCGTAGGCATAGCTTTAGA AGTTTAA
Upstream 100 bases:
>100_bases ATTCTACCACGGCTTGTTATATAATCAATAATGCCTACCAAAAAACTTATGTTTGGGTATATACTTATGATTAAAGATTT TTTAATATGGAGGAATGAGT
Downstream 100 bases:
>100_bases AGGAGGATGAATAATGCGAACAATGAATTCACTCATGTCTGAAATCGAACAAGCAAAAAAAATCGTTGTATGCGGTCATA TCATGCCTGATGGTGATTGT
Product: purine nucleoside phosphorylase I, inosine and guanosine-specific
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKDYKKLAKHLLERTNVKPEFALILGSGLGYLTKYFEDSHAISYSELEGFPQSTVEGHAGRFVLGKFHGKNVIAMDGRFH YYEGHEIKDVVTPIYVFKEMGISRLIITNAAGGINRSFEPGDIVAITDIINFAFRNPLIGPNDERYGVRFPDMSKTIDFD WLEKVEKTAESRGIKLKRGTYVWVTGPSYETPAEIKAYEFSGADMVGMSTVPEIIAARHCGINLIAFSCITNMASGILDK KLVHEEVVQTAQRVKSAFSKVVGIALEV
Sequences:
>Translated_268_residues MKDYKKLAKHLLERTNVKPEFALILGSGLGYLTKYFEDSHAISYSELEGFPQSTVEGHAGRFVLGKFHGKNVIAMDGRFH YYEGHEIKDVVTPIYVFKEMGISRLIITNAAGGINRSFEPGDIVAITDIINFAFRNPLIGPNDERYGVRFPDMSKTIDFD WLEKVEKTAESRGIKLKRGTYVWVTGPSYETPAEIKAYEFSGADMVGMSTVPEIIAARHCGINLIAFSCITNMASGILDK KLVHEEVVQTAQRVKSAFSKVVGIALEV >Mature_268_residues MKDYKKLAKHLLERTNVKPEFALILGSGLGYLTKYFEDSHAISYSELEGFPQSTVEGHAGRFVLGKFHGKNVIAMDGRFH YYEGHEIKDVVTPIYVFKEMGISRLIITNAAGGINRSFEPGDIVAITDIINFAFRNPLIGPNDERYGVRFPDMSKTIDFD WLEKVEKTAESRGIKLKRGTYVWVTGPSYETPAEIKAYEFSGADMVGMSTVPEIIAARHCGINLIAFSCITNMASGILDK KLVHEEVVQTAQRVKSAFSKVVGIALEV
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=274, Percent_Identity=45.6204379562044, Blast_Score=235, Evalue=4e-62, Organism=Homo sapiens, GI47132622, Length=222, Percent_Identity=28.8288288288288, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1788746, Length=249, Percent_Identity=42.1686746987952, Blast_Score=209, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17541190, Length=251, Percent_Identity=37.4501992031873, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323238, Length=237, Percent_Identity=41.7721518987342, Blast_Score=169, Evalue=4e-43, Organism=Drosophila melanogaster, GI45552887, Length=267, Percent_Identity=42.3220973782771, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI45552885, Length=267, Percent_Identity=42.3220973782771, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24656093, Length=267, Percent_Identity=42.3220973782771, Blast_Score=208, Evalue=3e-54, Organism=Drosophila melanogaster, GI24656090, Length=267, Percent_Identity=42.3220973782771, Blast_Score=208, Evalue=3e-54, Organism=Drosophila melanogaster, GI24762376, Length=239, Percent_Identity=31.7991631799163, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI221459247, Length=175, Percent_Identity=27.4285714285714, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 29849; Mature: 29849
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS01240 PNP_MTAP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDYKKLAKHLLERTNVKPEFALILGSGLGYLTKYFEDSHAISYSELEGFPQSTVEGHAG CCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCC RFVLGKFHGKNVIAMDGRFHYYEGHEIKDVVTPIYVFKEMGISRLIITNAAGGINRSFEP EEEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC GDIVAITDIINFAFRNPLIGPNDERYGVRFPDMSKTIDFDWLEKVEKTAESRGIKLKRGT CCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCE YVWVTGPSYETPAEIKAYEFSGADMVGMSTVPEIIAARHCGINLIAFSCITNMASGILDK EEEEECCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KLVHEEVVQTAQRVKSAFSKVVGIALEV HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDYKKLAKHLLERTNVKPEFALILGSGLGYLTKYFEDSHAISYSELEGFPQSTVEGHAG CCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCC RFVLGKFHGKNVIAMDGRFHYYEGHEIKDVVTPIYVFKEMGISRLIITNAAGGINRSFEP EEEEEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC GDIVAITDIINFAFRNPLIGPNDERYGVRFPDMSKTIDFDWLEKVEKTAESRGIKLKRGT CCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCE YVWVTGPSYETPAEIKAYEFSGADMVGMSTVPEIIAARHCGINLIAFSCITNMASGILDK EEEEECCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KLVHEEVVQTAQRVKSAFSKVVGIALEV HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9058965 [H]