| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617231
Identifier: 239617231
GI number: 239617231
Start: 885357
End: 886376
Strand: Reverse
Name: 239617231
Synonym: Kole_0839
Alternate gene names: NA
Gene position: 886376-885357 (Counterclockwise)
Preceding gene: 239617232
Following gene: 239617230
Centisome position: 38.5
GC content: 40.59
Gene sequence:
>1020_bases ATGAAAGTTAGTTTCGATTTTGAGCCAATTGATTACATGATTGAGCTGTTCCATGATGTAAAAAAAGGCATTGCTGTTAA CCCTCAAACAATTGACAAATTACTATCACACGATGCTATAAAACAAATGATAAAGCATTACAACAGACCAGATGGCTCAA ACGCTAATATTATGCCTGAAGATCTCAAGCATGTGTTCCTCAACCTCGACAGGGAAAACCTCTCGAGTGAGAATGACTTT CTCATCGAGTTTCATAAGAACCTGAAAGACAAATTTGACAGATTGGACGAACTTGAATCCTTTCTCAAACAACTAAAGGA GAAGCAGGAAGAAATAACGAATTTTGCTCAGAAAAAACTGCAACGTTTTTTGCCTCAGGGGATAGATTTCGAGCCAAGGA TTTTTATCATCTTCACTGGTTACAGCGGTGGGTATTTCGTGGGAAATGACATAACCCTCGATCTCGAACATATTTCAAAA TCGCTGGACAAGGTAGCGAGCACGATTGCCCATGAGCTCCATCATATCGCTTTCAACGGTATTGTAGAAAACACACTACT TTCAGGACAACTTCCTGCAAACAAGAACATGCTTGCGGAACTGATCGCTGGTCTGGCAGGTGAAGGGATAGCTTACTATT GCGTGGGAGGAGATCCCGAAAAAGGGCTTATAGGGTTCGAAGATAACCCTGATTATCAAAGCGATCTAAAAAGATGGAAA TCCTATTTTCAGGAAGTAAATGATGTGATGCTCAAATTACTTAATGATGAACTAACCACCGAGGAATTTTTTGGGTGGGC TTCGAAACATATGAGTAAAACCTTTGGAGCGATAAATATGGTAGGTATTAAGACAATCGAGGCCATTTATCGTGCCGGTG GAGACGGAGAAGTGCTGGGAGTAGTCGAAAATCCTGCAATCTACGTTAGAGTGTACAATAACGCTGCAACTTATCTCAAC GAGAACAAAAAAACAGATTATCCCCTCTTCGACAGTCGTCTAGAAGAGGTTTTTGGTTAA
Upstream 100 bases:
>100_bases TTAGGTACTCTCATTGAAATAACCGCTGTTTTTGTATCCCTTTACTTCATTGATATAATCTTACTGGATTTTTGTAAAAA AGGGGAAGGGGGTCACAAAA
Downstream 100 bases:
>100_bases AATTGGATTCCAGTTAAAAGCAATAAAAGAAGGCAGACACAGAAAATAGTGTCTGTCATCTTTTTAGTTGGGAGGAATGG CTTTGAAAAAAATATTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKVSFDFEPIDYMIELFHDVKKGIAVNPQTIDKLLSHDAIKQMIKHYNRPDGSNANIMPEDLKHVFLNLDRENLSSENDF LIEFHKNLKDKFDRLDELESFLKQLKEKQEEITNFAQKKLQRFLPQGIDFEPRIFIIFTGYSGGYFVGNDITLDLEHISK SLDKVASTIAHELHHIAFNGIVENTLLSGQLPANKNMLAELIAGLAGEGIAYYCVGGDPEKGLIGFEDNPDYQSDLKRWK SYFQEVNDVMLKLLNDELTTEEFFGWASKHMSKTFGAINMVGIKTIEAIYRAGGDGEVLGVVENPAIYVRVYNNAATYLN ENKKTDYPLFDSRLEEVFG
Sequences:
>Translated_339_residues MKVSFDFEPIDYMIELFHDVKKGIAVNPQTIDKLLSHDAIKQMIKHYNRPDGSNANIMPEDLKHVFLNLDRENLSSENDF LIEFHKNLKDKFDRLDELESFLKQLKEKQEEITNFAQKKLQRFLPQGIDFEPRIFIIFTGYSGGYFVGNDITLDLEHISK SLDKVASTIAHELHHIAFNGIVENTLLSGQLPANKNMLAELIAGLAGEGIAYYCVGGDPEKGLIGFEDNPDYQSDLKRWK SYFQEVNDVMLKLLNDELTTEEFFGWASKHMSKTFGAINMVGIKTIEAIYRAGGDGEVLGVVENPAIYVRVYNNAATYLN ENKKTDYPLFDSRLEEVFG >Mature_339_residues MKVSFDFEPIDYMIELFHDVKKGIAVNPQTIDKLLSHDAIKQMIKHYNRPDGSNANIMPEDLKHVFLNLDRENLSSENDF LIEFHKNLKDKFDRLDELESFLKQLKEKQEEITNFAQKKLQRFLPQGIDFEPRIFIIFTGYSGGYFVGNDITLDLEHISK SLDKVASTIAHELHHIAFNGIVENTLLSGQLPANKNMLAELIAGLAGEGIAYYCVGGDPEKGLIGFEDNPDYQSDLKRWK SYFQEVNDVMLKLLNDELTTEEFFGWASKHMSKTFGAINMVGIKTIEAIYRAGGDGEVLGVVENPAIYVRVYNNAATYLN ENKKTDYPLFDSRLEEVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38650; Mature: 38650
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSFDFEPIDYMIELFHDVKKGIAVNPQTIDKLLSHDAIKQMIKHYNRPDGSNANIMPE CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH DLKHVFLNLDRENLSSENDFLIEFHKNLKDKFDRLDELESFLKQLKEKQEEITNFAQKKL HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRFLPQGIDFEPRIFIIFTGYSGGYFVGNDITLDLEHISKSLDKVASTIAHELHHIAFNG HHHCCCCCCCCCEEEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IVENTLLSGQLPANKNMLAELIAGLAGEGIAYYCVGGDPEKGLIGFEDNPDYQSDLKRWK HHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHHH SYFQEVNDVMLKLLNDELTTEEFFGWASKHMSKTFGAINMVGIKTIEAIYRAGGDGEVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE VVENPAIYVRVYNNAATYLNENKKTDYPLFDSRLEEVFG EEECCEEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKVSFDFEPIDYMIELFHDVKKGIAVNPQTIDKLLSHDAIKQMIKHYNRPDGSNANIMPE CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH DLKHVFLNLDRENLSSENDFLIEFHKNLKDKFDRLDELESFLKQLKEKQEEITNFAQKKL HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRFLPQGIDFEPRIFIIFTGYSGGYFVGNDITLDLEHISKSLDKVASTIAHELHHIAFNG HHHCCCCCCCCCEEEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IVENTLLSGQLPANKNMLAELIAGLAGEGIAYYCVGGDPEKGLIGFEDNPDYQSDLKRWK HHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHHH SYFQEVNDVMLKLLNDELTTEEFFGWASKHMSKTFGAINMVGIKTIEAIYRAGGDGEVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE VVENPAIYVRVYNNAATYLNENKKTDYPLFDSRLEEVFG EEECCEEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA