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The map label for this gene is nudL [H]

Identifier: 239617223

GI number: 239617223

Start: 877531

End: 878040

Strand: Reverse

Name: nudL [H]

Synonym: Kole_0831

Alternate gene names: 239617223

Gene position: 878040-877531 (Counterclockwise)

Preceding gene: 239617227

Following gene: 239617222

Centisome position: 38.14

GC content: 41.57

Gene sequence:

>510_bases
TTGAAGAAAGCAGCTGTTATCGTTCCGGTTGTTAGCCTCGAAGACGAACCGTATTTAATTCTAACGAGGCGTTCCAGAAA
GCTGAAAAGCCACCCTGGACAGATCAGTTTTCCTGGAGGTATCCGTGAGAACGGAGAAGAATTACTGGAAACGGCTCTAA
GAGAAATGGAAGAGGAGATCGGGGTGAGCCGTGATAACGTATTGTTTGTTCACAGCTTGAAAATGACGGAAACACTTATG
TCAAGGATCGAAGTTCATCCATTTCTTGCACTTCTAAATAAAAGGGAATTCGTATTGAATCGCAATGAAGTGGAAGTGAT
TATTTTCGTTAAACTTTCTCTATTTCAACAAACGAAGGAAGAAGTTATACTGCTTCCATCCGGGGAAGAAACCATAAGAT
ACAGATTTCCCGGCCTCGTAGTCTGGGGTGCCACAGCAAGAATCATAGCTGGTTCAATCGATGAGATTCTCAAAAAATTG
TCAGAGTCAGGATATATCAACATCATTTAA

Upstream 100 bases:

>100_bases
TTCTTTCATAAGATCCCCTTTCATAAAATATTCGACGGCTATTATATCAGCTCTTTTCGTGCTATATTTTTCAATAAGAT
AAACCGTTGGAGGAGTTGTA

Downstream 100 bases:

>100_bases
TTCTTAATAGAATAAATATGAAGCAACCAAGAATATCTGAAAGGAGCAAAAAATGGATTCTATCGAAAAGGAAATCATAA
AATTCAGGGATGAAAGGGAT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKKAAVIVPVVSLEDEPYLILTRRSRKLKSHPGQISFPGGIRENGEELLETALREMEEEIGVSRDNVLFVHSLKMTETLM
SRIEVHPFLALLNKREFVLNRNEVEVIIFVKLSLFQQTKEEVILLPSGEETIRYRFPGLVVWGATARIIAGSIDEILKKL
SESGYINII

Sequences:

>Translated_169_residues
MKKAAVIVPVVSLEDEPYLILTRRSRKLKSHPGQISFPGGIRENGEELLETALREMEEEIGVSRDNVLFVHSLKMTETLM
SRIEVHPFLALLNKREFVLNRNEVEVIIFVKLSLFQQTKEEVILLPSGEETIRYRFPGLVVWGATARIIAGSIDEILKKL
SESGYINII
>Mature_169_residues
MKKAAVIVPVVSLEDEPYLILTRRSRKLKSHPGQISFPGGIRENGEELLETALREMEEEIGVSRDNVLFVHSLKMTETLM
SRIEVHPFLALLNKREFVLNRNEVEVIIFVKLSLFQQTKEEVILLPSGEETIRYRFPGLVVWGATARIIAGSIDEILKKL
SESGYINII

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17510677, Length=111, Percent_Identity=36.9369369369369, Blast_Score=66, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17536993, Length=139, Percent_Identity=32.3741007194245, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 19230; Mature: 19230

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAAVIVPVVSLEDEPYLILTRRSRKLKSHPGQISFPGGIRENGEELLETALREMEEEI
CCCCEEEEEEEEECCCCEEEEEECCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
GVSRDNVLFVHSLKMTETLMSRIEVHPFLALLNKREFVLNRNEVEVIIFVKLSLFQQTKE
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEHHHHCCCC
EVILLPSGEETIRYRFPGLVVWGATARIIAGSIDEILKKLSESGYINII
CEEEEECCCCEEEEECCCEEEECCHHHHHHCCHHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MKKAAVIVPVVSLEDEPYLILTRRSRKLKSHPGQISFPGGIRENGEELLETALREMEEEI
CCCCEEEEEEEEECCCCEEEEEECCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
GVSRDNVLFVHSLKMTETLMSRIEVHPFLALLNKREFVLNRNEVEVIIFVKLSLFQQTKE
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEHHHHCCCC
EVILLPSGEETIRYRFPGLVVWGATARIIAGSIDEILKKLSESGYINII
CEEEEECCCCEEEEECCCEEEECCHHHHHHCCHHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA