| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617220
Identifier: 239617220
GI number: 239617220
Start: 875260
End: 875820
Strand: Reverse
Name: 239617220
Synonym: Kole_0828
Alternate gene names: NA
Gene position: 875820-875260 (Counterclockwise)
Preceding gene: 239617222
Following gene: 239617219
Centisome position: 38.04
GC content: 35.29
Gene sequence:
>561_bases ATGAGGTATGTTGGAAAAAAATCGATATCTTCTTTTCTCTATGTGGTTATCAAGTTGAGTATCATTGTAGCCTTCATAGG TCTGTTCCTGAGCTTTCTTGTGTATATGTTTCCTGATTGGTTCAAGGCCAACGGCTTTAAAAGTTCTTTTAATTATCCTG GATTCGCTGTTAGGGTCAATAATGCTACAGCGGTTTTGGAATATCCCTTGGTCTATATAAGTTTATGGATTTCAGGATTA ATTTTCATAGGAATTCTCTATTGCCTAAAAAATATCTTCAAGGAATTTGCAAAAGGTAAAGTCTTCACAGACAGGAATAT AAGATCTATGGGATGGACGGGAATTTTTGTTCTACTATTCGCTGTTACAAGTTCCTTCTATGACCTTTTCAGAGGGTTCA TGCTGGCAAGTTATTTTGAAGATCTCTCGAGCGAAGTTGAGTTAATAGCCACTTATAGAATAAATCCTGCAACAGTTTTT GTTGGATTACTTATTCTAATTTATACGGCGATTTTTAAGACTGCCAAAGAATATAAAGAAGAGAATGACCTGACGATATG A
Upstream 100 bases:
>100_bases AAAACGAAAAATTTATCGAAATTCAATAAATATATCTTGATTTACATAAAATCACGTGTTATGATATCTCTGACAAAACA AATTTTCAGGAGGGAATATT
Downstream 100 bases:
>100_bases AGGTGAAACTATGCCCATTATTGTGAATCTTGATGTGATGATGGCGAAACGCAAAATTTCCCTCAACGAGCTTTCTAGGC GAGTGGGAATTACTGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MRYVGKKSISSFLYVVIKLSIIVAFIGLFLSFLVYMFPDWFKANGFKSSFNYPGFAVRVNNATAVLEYPLVYISLWISGL IFIGILYCLKNIFKEFAKGKVFTDRNIRSMGWTGIFVLLFAVTSSFYDLFRGFMLASYFEDLSSEVELIATYRINPATVF VGLLILIYTAIFKTAKEYKEENDLTI
Sequences:
>Translated_186_residues MRYVGKKSISSFLYVVIKLSIIVAFIGLFLSFLVYMFPDWFKANGFKSSFNYPGFAVRVNNATAVLEYPLVYISLWISGL IFIGILYCLKNIFKEFAKGKVFTDRNIRSMGWTGIFVLLFAVTSSFYDLFRGFMLASYFEDLSSEVELIATYRINPATVF VGLLILIYTAIFKTAKEYKEENDLTI >Mature_186_residues MRYVGKKSISSFLYVVIKLSIIVAFIGLFLSFLVYMFPDWFKANGFKSSFNYPGFAVRVNNATAVLEYPLVYISLWISGL IFIGILYCLKNIFKEFAKGKVFTDRNIRSMGWTGIFVLLFAVTSSFYDLFRGFMLASYFEDLSSEVELIATYRINPATVF VGLLILIYTAIFKTAKEYKEENDLTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21348; Mature: 21348
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVGKKSISSFLYVVIKLSIIVAFIGLFLSFLVYMFPDWFKANGFKSSFNYPGFAVRVN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEC NATAVLEYPLVYISLWISGLIFIGILYCLKNIFKEFAKGKVFTDRNIRSMGWTGIFVLLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AVTSSFYDLFRGFMLASYFEDLSSEVELIATYRINPATVFVGLLILIYTAIFKTAKEYKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ENDLTI CCCCCC >Mature Secondary Structure MRYVGKKSISSFLYVVIKLSIIVAFIGLFLSFLVYMFPDWFKANGFKSSFNYPGFAVRVN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEC NATAVLEYPLVYISLWISGLIFIGILYCLKNIFKEFAKGKVFTDRNIRSMGWTGIFVLLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH AVTSSFYDLFRGFMLASYFEDLSSEVELIATYRINPATVFVGLLILIYTAIFKTAKEYKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ENDLTI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA