| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yozG [H]
Identifier: 239617219
GI number: 239617219
Start: 875022
End: 875249
Strand: Reverse
Name: yozG [H]
Synonym: Kole_0827
Alternate gene names: 239617219
Gene position: 875249-875022 (Counterclockwise)
Preceding gene: 239617220
Following gene: 239617216
Centisome position: 38.02
GC content: 38.6
Gene sequence:
>228_bases ATGCCCATTATTGTGAATCTTGATGTGATGATGGCGAAACGCAAAATTTCCCTCAACGAGCTTTCTAGGCGAGTGGGAAT TACTGTTTCAAATCTTTCGATTCTAAAAAATTCAAAGGCAAAGGCAATCAGATTTTCTACCCTTGAGGCTCTTTGCAGGG AATTGAAATGTCAGCCAGGAGATATCCTTGAATATGTTGAAGAGGATAAAGATAGTATTACGCCATAA
Upstream 100 bases:
>100_bases ACAGTTTTTGTTGGATTACTTATTCTAATTTATACGGCGATTTTTAAGACTGCCAAAGAATATAAAGAAGAGAATGACCT GACGATATGAAGGTGAAACT
Downstream 100 bases:
>100_bases ATAGTATTATTTGCTTCCGTTGCTTTTTAAATAAACATTCAATAGTATGAGGCAGAAGTTTAGAGGAGAACTATGAATTT CCTGACAGAGAATAGCTAAA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPIIVNLDVMMAKRKISLNELSRRVGITVSNLSILKNSKAKAIRFSTLEALCRELKCQPGDILEYVEEDKDSITP
Sequences:
>Translated_75_residues MPIIVNLDVMMAKRKISLNELSRRVGITVSNLSILKNSKAKAIRFSTLEALCRELKCQPGDILEYVEEDKDSITP >Mature_74_residues PIIVNLDVMMAKRKISLNELSRRVGITVSNLSILKNSKAKAIRFSTLEALCRELKCQPGDILEYVEEDKDSITP
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 8448; Mature: 8317
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIIVNLDVMMAKRKISLNELSRRVGITVSNLSILKNSKAKAIRFSTLEALCRELKCQPG CCEEECCHHHHHHHCCCHHHHHHHHCCEECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCC DILEYVEEDKDSITP HHHHHHHCCCCCCCC >Mature Secondary Structure PIIVNLDVMMAKRKISLNELSRRVGITVSNLSILKNSKAKAIRFSTLEALCRELKCQPG CEEECCHHHHHHHCCCHHHHHHHHCCEECCHHHHCCCCCCCHHHHHHHHHHHHCCCCCC DILEYVEEDKDSITP HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]