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The map label for this gene is insD1 [C]

Identifier: 239617160

GI number: 239617160

Start: 819652

End: 820482

Strand: Reverse

Name: insD1 [C]

Synonym: Kole_0766

Alternate gene names: 239617160

Gene position: 820482-819652 (Counterclockwise)

Preceding gene: 239617161

Following gene: 239617157

Centisome position: 35.64

GC content: 42.96

Gene sequence:

>831_bases
GTGACATTGCTCCTTAATGAGGGATTTAGCGTTTCAGAAGCGCTGAGGTATTTGAAAATCAGCCGGAGCACGTATTACTA
CAAGCCCAGGGAATACAGTCGAAGAACGAATGATGAAGAAATACTCAAAGAAATAGAAGAACTCAAACGAGAACACCCTT
ACTGGGGATATCGTCGAATCTGGGCGATGTTGAGGAAAAAGGGCAACAAGCTCAACCGAAAGAGAGTATACCGGATAATG
AAAGAGAATGGATTGCTGTTCAAAGTTGAGCACAAAAAAGCTTGTAGAACCATTCAAAAAAAGATAAAGCCAACCAGGCC
CAGAGAGGTGCTTGGGATCGACATGACAAAAGTATTCACAAGAGATGCTGGTTGGGCATATTACATAGCAGTGATAGATT
GGTACACAAGAGAAATCCTTGGATCGGAAATAAGTCTCAGGTGTAGGACGGAAGAATGGTTGAAAGCGTTGGACAGAGCC
TTAAATGAGGGGTATCCCGAAGGTGTGCGGGGCGAAGAAGTAATACTGGTGAGCGATAACGGCAGCCAACCGACAAGCAC
GAAGTTTCTGAAAGAATGTGCTGTACTGGGGATAAAACAGATATTCACGAGCTACAACAACCCAAAAGGTAATGCCAACA
CGGAAAGGTATTTCAGAACATACAAAGAAGAAGTTGCATGGGTACTGGACAATCCGAGTTACGAAGAGCTAATCGAAAAG
ACCAAAACTTTTGAAACGTTTTACAATGAAGAATATCCACACAGTGCACTAGGTTACAAGAGTCCCAAAGAGGTATTCGA
AGAATCCGTGAGTCTACACAAAATTGCTTGA

Upstream 100 bases:

>100_bases
TCGAAGAAAAAATCGAAGAACTCGAGAAGGTAATTGGGAAACAGACCATCGTCATTGAGACCTTAAAAAAAACAGTAGTG
CATCCAGGCAACGGGAAATA

Downstream 100 bases:

>100_bases
TTTTTTGTCCAGTTTTTCGGGGTGCATTACAGAGTTTTCGGGCATGTCACATATTTTGTGTAAACTCCAAACTCCGGAAA
AGATCAGACATAGGATTTCA

Product: Integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTLLLNEGFSVSEALRYLKISRSTYYYKPREYSRRTNDEEILKEIEELKREHPYWGYRRIWAMLRKKGNKLNRKRVYRIM
KENGLLFKVEHKKACRTIQKKIKPTRPREVLGIDMTKVFTRDAGWAYYIAVIDWYTREILGSEISLRCRTEEWLKALDRA
LNEGYPEGVRGEEVILVSDNGSQPTSTKFLKECAVLGIKQIFTSYNNPKGNANTERYFRTYKEEVAWVLDNPSYEELIEK
TKTFETFYNEEYPHSALGYKSPKEVFEESVSLHKIA

Sequences:

>Translated_276_residues
MTLLLNEGFSVSEALRYLKISRSTYYYKPREYSRRTNDEEILKEIEELKREHPYWGYRRIWAMLRKKGNKLNRKRVYRIM
KENGLLFKVEHKKACRTIQKKIKPTRPREVLGIDMTKVFTRDAGWAYYIAVIDWYTREILGSEISLRCRTEEWLKALDRA
LNEGYPEGVRGEEVILVSDNGSQPTSTKFLKECAVLGIKQIFTSYNNPKGNANTERYFRTYKEEVAWVLDNPSYEELIEK
TKTFETFYNEEYPHSALGYKSPKEVFEESVSLHKIA
>Mature_275_residues
TLLLNEGFSVSEALRYLKISRSTYYYKPREYSRRTNDEEILKEIEELKREHPYWGYRRIWAMLRKKGNKLNRKRVYRIMK
ENGLLFKVEHKKACRTIQKKIKPTRPREVLGIDMTKVFTRDAGWAYYIAVIDWYTREILGSEISLRCRTEEWLKALDRAL
NEGYPEGVRGEEVILVSDNGSQPTSTKFLKECAVLGIKQIFTSYNNPKGNANTERYFRTYKEEVAWVLDNPSYEELIEKT
KTFETFYNEEYPHSALGYKSPKEVFEESVSLHKIA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=238, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1790724, Length=291, Percent_Identity=28.8659793814433, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789424, Length=291, Percent_Identity=28.8659793814433, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789224, Length=291, Percent_Identity=28.8659793814433, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788305, Length=291, Percent_Identity=28.8659793814433, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787669, Length=291, Percent_Identity=28.8659793814433, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786558, Length=291, Percent_Identity=28.8659793814433, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789981, Length=257, Percent_Identity=27.6264591439689, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 32764; Mature: 32633

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLLNEGFSVSEALRYLKISRSTYYYKPREYSRRTNDEEILKEIEELKREHPYWGYRRI
CEEEECCCCCHHHHHHHHHHHCCEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH
WAMLRKKGNKLNRKRVYRIMKENGLLFKVEHKKACRTIQKKIKPTRPREVLGIDMTKVFT
HHHHHHHCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH
RDAGWAYYIAVIDWYTREILGSEISLRCRTEEWLKALDRALNEGYPEGVRGEEVILVSDN
CCCCCEEEHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
GSQPTSTKFLKECAVLGIKQIFTSYNNPKGNANTERYFRTYKEEVAWVLDNPSYEELIEK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TKTFETFYNEEYPHSALGYKSPKEVFEESVSLHKIA
HHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLLLNEGFSVSEALRYLKISRSTYYYKPREYSRRTNDEEILKEIEELKREHPYWGYRRI
EEEECCCCCHHHHHHHHHHHCCEEEECCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH
WAMLRKKGNKLNRKRVYRIMKENGLLFKVEHKKACRTIQKKIKPTRPREVLGIDMTKVFT
HHHHHHHCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH
RDAGWAYYIAVIDWYTREILGSEISLRCRTEEWLKALDRALNEGYPEGVRGEEVILVSDN
CCCCCEEEHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
GSQPTSTKFLKECAVLGIKQIFTSYNNPKGNANTERYFRTYKEEVAWVLDNPSYEELIEK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TKTFETFYNEEYPHSALGYKSPKEVFEESVSLHKIA
HHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA