Click here to switch to the map view.

The map label for this gene is 239617155

Identifier: 239617155

GI number: 239617155

Start: 815504

End: 816901

Strand: Reverse

Name: 239617155

Synonym: Kole_0761

Alternate gene names: NA

Gene position: 816901-815504 (Counterclockwise)

Preceding gene: 239617156

Following gene: 239617154

Centisome position: 35.48

GC content: 31.62

Gene sequence:

>1398_bases
ATGGGAAATTACCACTTCATAGTTAATAATCTACCAACTATAAAAAGAGAATTTTATCTTTTTTCAACTACCAGCAATGA
AACTATACTATGGCACAAGCCCACGTTATCTATATACACTTTAGACGAAACAAACACAAAATTCTTCAAGCTACTTCTAA
AAAATAACACGGAGGAAATAAACGAAATCCTAACTGTGCTTCCTAATTCCGAAAATACTATTAACCAATTAAAGCAGCTT
CTTTCAATAAAAACAGTAACTAAAAACCATGTGGAAAGATTGGCTCTTTTAGTATCACAAGAGTGCCCTCTCAAATGTGT
TTATTGCTACGCAAATGGTGGAACATATGGTGAAGGCGGATTAATGAATATTTCGACATTAGAAAATACATTGACAGTTT
TCTATAATTTATACGGTTATATTGAAACTATTCAGCTTTTTGGTGGTGAGCCACTGTTAAATCTCAAAGCAATTAAAAAA
TTAATAGAGACTTTGAAAATATTGACAAACGAAAAAAAGATTTCAGCATCACCAAAAATTAGCCTTGAAACAGGATTGGG
TGTTTCCCAGAAAAATGTAGAGGAGCTGGTGAAGTTAATCAAAGATAACAGTTCACTATTTGAATTTGAAATAGTTGTAA
GTCTTGACGGGCCTGAAATAATTCAAAACACTTTACGACCATTTAAAGACGGAAGTCCTTCATATAACAGAGTTATTGAA
AATCTTGACATCCTGAGGAATATCTACCAACCAAAGGCGATTGAAGTAACTTACACGAAAAAACATTTGGAGTTTGGATT
TTCTCGTGAGGATTTAAAGAATTTTTTTGCTCAGAAACTAGGAATAACAAGTCTTATGATTGTACCCGTTATATCAAATC
ATCCTGACCTATTAATAGGAACTGATTTGTTTACAAATAGCGTTATCGACATTCTTAAGTTAATAGAAAAATTAAAAACA
TCACGTAAATTTGAAAACCAAGACGAAATTTCTAAAAGAATAAAAGTATATTTGAGTAACATATTTAATTCAAATCCAAC
AGAATATTTTTGTGGAGCTGGCATAACAAGTTTTGCTGTCTCAGCCCAAGGTGATATTTACCCATGCCAACTTGTTGTTG
GAAAGAACAAATTTAAAATTGCCAACGTCAACGATGATTTAAGTGAAGTTTCTAAAAAATTGGAAGTCATGAAAGAAAAA
TATAAGGTTTTAAATTCAAAAAGTAACGATACAATGTGCAAAGAATGCTTTTTAGAATATCTCTGTGAAGGCTGTGTTTT
TGAAGAGCATGTTTTAGGAAAATCTAGTGATGCAACTATTCCACACGAGTACTGCAAAATAAAAATGGAAATTGTCAAGA
AAATTTTTGATGAAAAGGTTTGGGAGTGGTTATATTGA

Upstream 100 bases:

>100_bases
AATGTGGCGGGTTTTTGAATTCATATACTAAATTCAAAAGTTTAAATAAAAGACAAATCTTAGTTTTTGACTCATCAAAT
ATAAAGAGGAGGATGGAAAA

Downstream 100 bases:

>100_bases
GAATTCTTACACGTGATCCTGAAGTTCACGAACTTCTAAACTACGCAAAACGGTACACAAAATATCAGAAATTGATTTTC
GTGTTTGCACCAATTCTGCT

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MGNYHFIVNNLPTIKREFYLFSTTSNETILWHKPTLSIYTLDETNTKFFKLLLKNNTEEINEILTVLPNSENTINQLKQL
LSIKTVTKNHVERLALLVSQECPLKCVYCYANGGTYGEGGLMNISTLENTLTVFYNLYGYIETIQLFGGEPLLNLKAIKK
LIETLKILTNEKKISASPKISLETGLGVSQKNVEELVKLIKDNSSLFEFEIVVSLDGPEIIQNTLRPFKDGSPSYNRVIE
NLDILRNIYQPKAIEVTYTKKHLEFGFSREDLKNFFAQKLGITSLMIVPVISNHPDLLIGTDLFTNSVIDILKLIEKLKT
SRKFENQDEISKRIKVYLSNIFNSNPTEYFCGAGITSFAVSAQGDIYPCQLVVGKNKFKIANVNDDLSEVSKKLEVMKEK
YKVLNSKSNDTMCKECFLEYLCEGCVFEEHVLGKSSDATIPHEYCKIKMEIVKKIFDEKVWEWLY

Sequences:

>Translated_465_residues
MGNYHFIVNNLPTIKREFYLFSTTSNETILWHKPTLSIYTLDETNTKFFKLLLKNNTEEINEILTVLPNSENTINQLKQL
LSIKTVTKNHVERLALLVSQECPLKCVYCYANGGTYGEGGLMNISTLENTLTVFYNLYGYIETIQLFGGEPLLNLKAIKK
LIETLKILTNEKKISASPKISLETGLGVSQKNVEELVKLIKDNSSLFEFEIVVSLDGPEIIQNTLRPFKDGSPSYNRVIE
NLDILRNIYQPKAIEVTYTKKHLEFGFSREDLKNFFAQKLGITSLMIVPVISNHPDLLIGTDLFTNSVIDILKLIEKLKT
SRKFENQDEISKRIKVYLSNIFNSNPTEYFCGAGITSFAVSAQGDIYPCQLVVGKNKFKIANVNDDLSEVSKKLEVMKEK
YKVLNSKSNDTMCKECFLEYLCEGCVFEEHVLGKSSDATIPHEYCKIKMEIVKKIFDEKVWEWLY
>Mature_464_residues
GNYHFIVNNLPTIKREFYLFSTTSNETILWHKPTLSIYTLDETNTKFFKLLLKNNTEEINEILTVLPNSENTINQLKQLL
SIKTVTKNHVERLALLVSQECPLKCVYCYANGGTYGEGGLMNISTLENTLTVFYNLYGYIETIQLFGGEPLLNLKAIKKL
IETLKILTNEKKISASPKISLETGLGVSQKNVEELVKLIKDNSSLFEFEIVVSLDGPEIIQNTLRPFKDGSPSYNRVIEN
LDILRNIYQPKAIEVTYTKKHLEFGFSREDLKNFFAQKLGITSLMIVPVISNHPDLLIGTDLFTNSVIDILKLIEKLKTS
RKFENQDEISKRIKVYLSNIFNSNPTEYFCGAGITSFAVSAQGDIYPCQLVVGKNKFKIANVNDDLSEVSKKLEVMKEKY
KVLNSKSNDTMCKECFLEYLCEGCVFEEHVLGKSSDATIPHEYCKIKMEIVKKIFDEKVWEWLY

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53134; Mature: 53003

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYHFIVNNLPTIKREFYLFSTTSNETILWHKPTLSIYTLDETNTKFFKLLLKNNTEEI
CCCEEEEECCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHCCHHHH
NEILTVLPNSENTINQLKQLLSIKTVTKNHVERLALLVSQECPLKCVYCYANGGTYGEGG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
LMNISTLENTLTVFYNLYGYIETIQLFGGEPLLNLKAIKKLIETLKILTNEKKISASPKI
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCE
SLETGLGVSQKNVEELVKLIKDNSSLFEFEIVVSLDGPEIIQNTLRPFKDGSPSYNRVIE
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
NLDILRNIYQPKAIEVTYTKKHLEFGFSREDLKNFFAQKLGITSLMIVPVISNHPDLLIG
HHHHHHHHCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE
TDLFTNSVIDILKLIEKLKTSRKFENQDEISKRIKVYLSNIFNSNPTEYFCGAGITSFAV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHEE
SAQGDIYPCQLVVGKNKFKIANVNDDLSEVSKKLEVMKEKYKVLNSKSNDTMCKECFLEY
ECCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LCEGCVFEEHVLGKSSDATIPHEYCKIKMEIVKKIFDEKVWEWLY
HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNYHFIVNNLPTIKREFYLFSTTSNETILWHKPTLSIYTLDETNTKFFKLLLKNNTEEI
CCEEEEECCCCCCEEEEEEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHHCCHHHH
NEILTVLPNSENTINQLKQLLSIKTVTKNHVERLALLVSQECPLKCVYCYANGGTYGEGG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
LMNISTLENTLTVFYNLYGYIETIQLFGGEPLLNLKAIKKLIETLKILTNEKKISASPKI
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCE
SLETGLGVSQKNVEELVKLIKDNSSLFEFEIVVSLDGPEIIQNTLRPFKDGSPSYNRVIE
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHH
NLDILRNIYQPKAIEVTYTKKHLEFGFSREDLKNFFAQKLGITSLMIVPVISNHPDLLIG
HHHHHHHHCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEE
TDLFTNSVIDILKLIEKLKTSRKFENQDEISKRIKVYLSNIFNSNPTEYFCGAGITSFAV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHEE
SAQGDIYPCQLVVGKNKFKIANVNDDLSEVSKKLEVMKEKYKVLNSKSNDTMCKECFLEY
ECCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LCEGCVFEEHVLGKSSDATIPHEYCKIKMEIVKKIFDEKVWEWLY
HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]