Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is 239617083
Identifier: 239617083
GI number: 239617083
Start: 736915
End: 738237
Strand: Reverse
Name: 239617083
Synonym: Kole_0685
Alternate gene names: NA
Gene position: 738237-736915 (Counterclockwise)
Preceding gene: 239617084
Following gene: 239617082
Centisome position: 32.07
GC content: 44.14
Gene sequence:
>1323_bases ATGAAGATAGGAGTTATAGGGCCGAAAGACCTTGTGAAAAAAGTAGTATCAGTTAGCAAAGAGTTTCGCAATTTAGAAGC TGTTCCTCTTGAGTATAAGATCGAGACCGAAGCGCCGGCAATTGTAGAAGCCAATCAGCATCTTTTTGACGGCATCCTCT TCACAGGTCCGATCCCTTATTATCTCTGTGCCTCAGAGATAAATCAGCTTGTTGTGTGGGATTATGTGCCTTATCGTTCC ACTGGGCTTGTTATGTCTTTGCTGGATGTTCTCAGGGTATTTCCGCAGTATTTAGAAAAAGAATTCAGCATCTCCGTCGA TACCCTTGCTGAATCAGAGGTTGTAGAAATTATCGACGAAGCTCAAATTCCAGTAAAGGCTGTTTACACTAGAGAATTCT CTCCTAATACAAATGCCAACCAGGATTTTTGCGATTTTCATGAAGCGATGTTCAGAGAGAAGAAGGTCGATGTGTGCATT ACCTGCTTGAAGTCGGCTTACAAAGTGCTGAAAGACAAAGGTATTCCCGTCTTTACCATCACGCCGTCTGTGCACACCAT AAGGGGTACCCTTCAGAGAATGATACTTGAAATGAAAAGCAATAAAATGGAACTTCTCAGAACGGTCGTTGGTGTTATCG TTCCAAACGAGCTTTCAAATAATTCAGCGAAGAAGCGGAAAGACCTGATGAAGATCTACAATGTGCTTCTGGAATATGCG AACAGAAAGAACCTGCTGGTATTCCCGCGAATGGAGTCTTCTTTTATTCTTATTGAAACCTACGGACAGCTCATGTTGGA TACGGATAACTTCAAGCACGATCCGCTGAGAACGCAGGTTCTGGTTTCTACCGGTATCGATGTATGCGTTGGCTACGGTG TCGGAATCAACGCATCCATGGCTGAAGAGTACGCAATGAACGCGGTTGAGCTCACAATGAAAAAGGGAGGCAAGGGCTGT TACATCTTCGATGGGACTACGGTAATAGGACCGCTCGATGAAAATGGGATAGGATCTTTCGAGCTTGAAACTCAGGACAA TAACCTGACAGTACTTTCAGAAAAAACAGGGCTCACTATCAGTAACCTTTCAAGAACGTTGAAAGCTCTTGAGATGTTGA ACGAACATTTTTCGGCAACTGATCTGGCTTCTATATTGCGAATAAGTCCGAAAACCGCCAGAAGGATACTCGCAAAACTC ATCAAAGCGGATATAGTCCGCGTAGTGGGGACGCGCTCAAATATTGGAGCTGGGCGTCCCACAAAAGTTTACGCGCTTGT TAGCGGTTCAATAGAAACAGAGAGGAAGAGAGTAGATGTGTGA
Upstream 100 bases:
>100_bases CTCTTTGTTCCTTGGATATGTTGTTCTCATGTGCTATCATAAGGCTGAGATAATTATGCGCTAATTAGGGACATGTCCAA AAATATGGGGAGGCTTTCTC
Downstream 100 bases:
>100_bases ATTAGATGGAAAGCTTTTCCCAGCGGTTCCAACTCTTTTCAACAAGAAAACCGGGAGTATTGATATACAGGCAAACAAAG ATTTTGCAATGTATCTCAGA
Product: transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKIGVIGPKDLVKKVVSVSKEFRNLEAVPLEYKIETEAPAIVEANQHLFDGILFTGPIPYYLCASEINQLVVWDYVPYRS TGLVMSLLDVLRVFPQYLEKEFSISVDTLAESEVVEIIDEAQIPVKAVYTREFSPNTNANQDFCDFHEAMFREKKVDVCI TCLKSAYKVLKDKGIPVFTITPSVHTIRGTLQRMILEMKSNKMELLRTVVGVIVPNELSNNSAKKRKDLMKIYNVLLEYA NRKNLLVFPRMESSFILIETYGQLMLDTDNFKHDPLRTQVLVSTGIDVCVGYGVGINASMAEEYAMNAVELTMKKGGKGC YIFDGTTVIGPLDENGIGSFELETQDNNLTVLSEKTGLTISNLSRTLKALEMLNEHFSATDLASILRISPKTARRILAKL IKADIVRVVGTRSNIGAGRPTKVYALVSGSIETERKRVDV
Sequences:
>Translated_440_residues MKIGVIGPKDLVKKVVSVSKEFRNLEAVPLEYKIETEAPAIVEANQHLFDGILFTGPIPYYLCASEINQLVVWDYVPYRS TGLVMSLLDVLRVFPQYLEKEFSISVDTLAESEVVEIIDEAQIPVKAVYTREFSPNTNANQDFCDFHEAMFREKKVDVCI TCLKSAYKVLKDKGIPVFTITPSVHTIRGTLQRMILEMKSNKMELLRTVVGVIVPNELSNNSAKKRKDLMKIYNVLLEYA NRKNLLVFPRMESSFILIETYGQLMLDTDNFKHDPLRTQVLVSTGIDVCVGYGVGINASMAEEYAMNAVELTMKKGGKGC YIFDGTTVIGPLDENGIGSFELETQDNNLTVLSEKTGLTISNLSRTLKALEMLNEHFSATDLASILRISPKTARRILAKL IKADIVRVVGTRSNIGAGRPTKVYALVSGSIETERKRVDV >Mature_440_residues MKIGVIGPKDLVKKVVSVSKEFRNLEAVPLEYKIETEAPAIVEANQHLFDGILFTGPIPYYLCASEINQLVVWDYVPYRS TGLVMSLLDVLRVFPQYLEKEFSISVDTLAESEVVEIIDEAQIPVKAVYTREFSPNTNANQDFCDFHEAMFREKKVDVCI TCLKSAYKVLKDKGIPVFTITPSVHTIRGTLQRMILEMKSNKMELLRTVVGVIVPNELSNNSAKKRKDLMKIYNVLLEYA NRKNLLVFPRMESSFILIETYGQLMLDTDNFKHDPLRTQVLVSTGIDVCVGYGVGINASMAEEYAMNAVELTMKKGGKGC YIFDGTTVIGPLDENGIGSFELETQDNNLTVLSEKTGLTISNLSRTLKALEMLNEHFSATDLASILRISPKTARRILAKL IKADIVRVVGTRSNIGAGRPTKVYALVSGSIETERKRVDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49153; Mature: 49153
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGVIGPKDLVKKVVSVSKEFRNLEAVPLEYKIETEAPAIVEANQHLFDGILFTGPIPY CEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHHCCEEECCCCHH YLCASEINQLVVWDYVPYRSTGLVMSLLDVLRVFPQYLEKEFSISVDTLAESEVVEIIDE HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AQIPVKAVYTREFSPNTNANQDFCDFHEAMFREKKVDVCITCLKSAYKVLKDKGIPVFTI CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE TPSVHTIRGTLQRMILEMKSNKMELLRTVVGVIVPNELSNNSAKKRKDLMKIYNVLLEYA CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC NRKNLLVFPRMESSFILIETYGQLMLDTDNFKHDPLRTQVLVSTGIDVCVGYGVGINASM CCCCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCHHEEEECCCCCEEEECCCCCCHHH AEEYAMNAVELTMKKGGKGCYIFDGTTVIGPLDENGIGSFELETQDNNLTVLSEKTGLTI HHHHHHHHHEEHHHCCCCEEEEEECCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCH SNLSRTLKALEMLNEHFSATDLASILRISPKTARRILAKLIKADIVRVVGTRSNIGAGRP HHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TKVYALVSGSIETERKRVDV CEEEEEEECCCHHHHHHCCC >Mature Secondary Structure MKIGVIGPKDLVKKVVSVSKEFRNLEAVPLEYKIETEAPAIVEANQHLFDGILFTGPIPY CEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHHCCEEECCCCHH YLCASEINQLVVWDYVPYRSTGLVMSLLDVLRVFPQYLEKEFSISVDTLAESEVVEIIDE HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AQIPVKAVYTREFSPNTNANQDFCDFHEAMFREKKVDVCITCLKSAYKVLKDKGIPVFTI CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE TPSVHTIRGTLQRMILEMKSNKMELLRTVVGVIVPNELSNNSAKKRKDLMKIYNVLLEYA CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC NRKNLLVFPRMESSFILIETYGQLMLDTDNFKHDPLRTQVLVSTGIDVCVGYGVGINASM CCCCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCHHEEEECCCCCEEEECCCCCCHHH AEEYAMNAVELTMKKGGKGCYIFDGTTVIGPLDENGIGSFELETQDNNLTVLSEKTGLTI HHHHHHHHHEEHHHCCCCEEEEEECCEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCH SNLSRTLKALEMLNEHFSATDLASILRISPKTARRILAKLIKADIVRVVGTRSNIGAGRP HHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TKVYALVSGSIETERKRVDV CEEEEEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA