Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is 239617082
Identifier: 239617082
GI number: 239617082
Start: 735972
End: 736922
Strand: Reverse
Name: 239617082
Synonym: Kole_0684
Alternate gene names: NA
Gene position: 736922-735972 (Counterclockwise)
Preceding gene: 239617083
Following gene: 239617081
Centisome position: 32.01
GC content: 43.95
Gene sequence:
>951_bases ATGTGTGAATTAGATGGAAAGCTTTTCCCAGCGGTTCCAACTCTTTTCAACAAGAAAACCGGGAGTATTGATATACAGGC AAACAAAGATTTTGCAATGTATCTCAGAGAAACGCCGATAGACGGAGTAGCAGTCTGGGTGCATACGGGTAGAGGTCTAT TTCTCTCACGTGAAGAAAGACATTTCATTCTGAAGCTGTGGAGAGAAGCCTTACCTGAAAAGACGATCTTCGCCGGTGTT GGTTCGAAGAGAAAGGAATTGAATTATGAAGATATAAAGATTTACATAGAAGAGCTCCTTATGATGGCGGAGGAGGCAAA ATCTGGTGGGGCAGATTGCCTCCTCGCCTTCCCTCCCGTTCCTTTAAAGAAACTCAGCGAGGATGATGACCTGATCGTTC GTTATCATAGAGAATTGGAACAAATTGGACTGCCTGTCATACTGTTCTACCTTTACGAAGAAGCTGGTGGGCTCTCTTAT TCTTACGAGACTCTTGAAAAACTTCTCTCTATGGATCACGTAGTCGGAATCAAGCTGGCCACGCTTTATTCGGTAATAAA GATGCAGGATATTTCCAGATTCGTACTGGAAAGATTCCCCGATAAAGCTTTAATTACAGGAGAAGACAGGATGTTTGGCT ATTCGCTGACCAGGGGCTCCCGCTCAGCGTTGATTGGGCTTGGATCGGTATTACCGCAATTGCAAAAAGAGTTGATAGAA AGTTACCTAAAAAAAGATCCTGCTTTTATTTCTATCATGAAAAAGGTCGACCTTTTGGCTGAGGCGTTGTTTGTCGATCC GATGGAAGGTTACATCGAGAGGGTCGAAGAAGCGCTGGCGATGATGAACATAATTCCTGAAGATTGCGTGTTTGATCCGT ACGGTCCGGGTATTAGTGACACAGATAAAGAAAGGATTCGCAAAACTCTGGAACAATTGGGGGCACTTTGA
Upstream 100 bases:
>100_bases GTCCGCGTAGTGGGGACGCGCTCAAATATTGGAGCTGGGCGTCCCACAAAAGTTTACGCGCTTGTTAGCGGTTCAATAGA AACAGAGAGGAAGAGAGTAG
Downstream 100 bases:
>100_bases GATGGCTGTATATCTTCTGCCGGAAACCTTAGATGTCGATTCAGATTTCATGAAGATGGTATCCGAAGATTATGAGCGTT TCGGAGATGAAGGAATGCCT
Product: dihydrodipicolinate synthetase
Products: dihydrodipicolinate; H2O
Alternate protein names: Dihydrodipicolinate Synthase
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MCELDGKLFPAVPTLFNKKTGSIDIQANKDFAMYLRETPIDGVAVWVHTGRGLFLSREERHFILKLWREALPEKTIFAGV GSKRKELNYEDIKIYIEELLMMAEEAKSGGADCLLAFPPVPLKKLSEDDDLIVRYHRELEQIGLPVILFYLYEEAGGLSY SYETLEKLLSMDHVVGIKLATLYSVIKMQDISRFVLERFPDKALITGEDRMFGYSLTRGSRSALIGLGSVLPQLQKELIE SYLKKDPAFISIMKKVDLLAEALFVDPMEGYIERVEEALAMMNIIPEDCVFDPYGPGISDTDKERIRKTLEQLGAL
Sequences:
>Translated_316_residues MCELDGKLFPAVPTLFNKKTGSIDIQANKDFAMYLRETPIDGVAVWVHTGRGLFLSREERHFILKLWREALPEKTIFAGV GSKRKELNYEDIKIYIEELLMMAEEAKSGGADCLLAFPPVPLKKLSEDDDLIVRYHRELEQIGLPVILFYLYEEAGGLSY SYETLEKLLSMDHVVGIKLATLYSVIKMQDISRFVLERFPDKALITGEDRMFGYSLTRGSRSALIGLGSVLPQLQKELIE SYLKKDPAFISIMKKVDLLAEALFVDPMEGYIERVEEALAMMNIIPEDCVFDPYGPGISDTDKERIRKTLEQLGAL >Mature_316_residues MCELDGKLFPAVPTLFNKKTGSIDIQANKDFAMYLRETPIDGVAVWVHTGRGLFLSREERHFILKLWREALPEKTIFAGV GSKRKELNYEDIKIYIEELLMMAEEAKSGGADCLLAFPPVPLKKLSEDDDLIVRYHRELEQIGLPVILFYLYEEAGGLSY SYETLEKLLSMDHVVGIKLATLYSVIKMQDISRFVLERFPDKALITGEDRMFGYSLTRGSRSALIGLGSVLPQLQKELIE SYLKKDPAFISIMKKVDLLAEALFVDPMEGYIERVEEALAMMNIIPEDCVFDPYGPGISDTDKERIRKTLEQLGAL
Specific function: Unknown
COG id: COG0329
COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.52
Molecular weight: Translated: 35843; Mature: 35843
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCELDGKLFPAVPTLFNKKTGSIDIQANKDFAMYLRETPIDGVAVWVHTGRGLFLSREER CCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEHHHCCCCCCEEEEEECCCCEEECCHHH HFILKLWREALPEKTIFAGVGSKRKELNYEDIKIYIEELLMMAEEAKSGGADCLLAFPPV HHHHHHHHHHCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC PLKKLSEDDDLIVRYHRELEQIGLPVILFYLYEEAGGLSYSYETLEKLLSMDHVVGIKLA CHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH TLYSVIKMQDISRFVLERFPDKALITGEDRMFGYSLTRGSRSALIGLGSVLPQLQKELIE HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH SYLKKDPAFISIMKKVDLLAEALFVDPMEGYIERVEEALAMMNIIPEDCVFDPYGPGISD HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC TDKERIRKTLEQLGAL CCHHHHHHHHHHHCCC >Mature Secondary Structure MCELDGKLFPAVPTLFNKKTGSIDIQANKDFAMYLRETPIDGVAVWVHTGRGLFLSREER CCCCCCCCCCCHHHHHCCCCCCEEEEECCCCEEHHHCCCCCCEEEEEECCCCEEECCHHH HFILKLWREALPEKTIFAGVGSKRKELNYEDIKIYIEELLMMAEEAKSGGADCLLAFPPV HHHHHHHHHHCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC PLKKLSEDDDLIVRYHRELEQIGLPVILFYLYEEAGGLSYSYETLEKLLSMDHVVGIKLA CHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH TLYSVIKMQDISRFVLERFPDKALITGEDRMFGYSLTRGSRSALIGLGSVLPQLQKELIE HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH SYLKKDPAFISIMKKVDLLAEALFVDPMEGYIERVEEALAMMNIIPEDCVFDPYGPGISD HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC TDKERIRKTLEQLGAL CCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate 4-semialdehyde; pyruvate
Specific reaction: L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA