Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is 239617060
Identifier: 239617060
GI number: 239617060
Start: 703621
End: 704451
Strand: Reverse
Name: 239617060
Synonym: Kole_0662
Alternate gene names: NA
Gene position: 704451-703621 (Counterclockwise)
Preceding gene: 239617061
Following gene: 239617059
Centisome position: 30.6
GC content: 36.94
Gene sequence:
>831_bases ATGAGCTGGAAAATGTATAAAGTTGTTCTTCAACTCCTCTCGCCGCTGCATATAGGTAAGAGGAAGATCGGAAATCTTCA ACAAACTAGATATTATGTTCCAGGCAGAACTCTTTGGGGGGCGTTGACAGCCAGAATAGCAAGAGAGTATGAAAATTTCG ATTATGAAAAAACAGGCAAAGATGTTGACGAGTTTCTCAGATTCTGTTATTTCTATCCTTCAGATGATGACAAAAAAATA ACCCTTTTCCCTTGGGAAAACCTGGACGAATTTGAGTGGAAATATATACAAAGCTATGTTACCACTGCGTTAGATTCAAA TACAAGAAAAGCTGAGGGTGGCAGCTTACATGAAATAGAATATATTGCTCAAAAAACAAGAGAAAATAAGAAAGTGTATC TTATTGGCTATATCTTCGAGCGAGATGGCTCTAAGTTAAAGTGGAAAGAGGTACTATCCAAAGTTCAGCTAGGTGGTGAA AGAACCTATGGTTGGGGTAGAGTAGTAGTTTCTAGTATTATGGAGACACATAAGTTAGATTACCCTGGCTATAAGGTCGA ACTTAATGAGGATACTCCAATAGTAAAAGCTTCTAAATCTGATTCTAAGCCTTATGCCTTAATTTCCCATGTGCTTTTTG ATGAACAGCTCAATAATCATATTGTGAGAGGAAACATAGAACCTTTGGTTGGACTTGAAACTAATATGAAAAACGGGAAT TTTGGCTCAAAAGTTTCAACAGCAAAAATATGTTGGACGCCTGGAACTGTGTTCGAGGAAGAATATAGCTTTTTGATATG TCAAAAAGGCATATGGAAGTTCGAATCATAA
Upstream 100 bases:
>100_bases AGATATGTAATAATACTGATTTTCTTTTCCTCGTGAAAGATCTCTGGGAGAGAACTCTTATCTATGCTCGATATGGTGCT AAAGCGAAGGTGAAAGAATA
Downstream 100 bases:
>100_bases TTTATTCAATGTCAACCACTGATAAGTAGAAATTGCCAAGGGATCGACAGGAGTCTAGAAAATAATAGTAGAGGAGTTCT GAAACACTTAGCTCTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSWKMYKVVLQLLSPLHIGKRKIGNLQQTRYYVPGRTLWGALTARIAREYENFDYEKTGKDVDEFLRFCYFYPSDDDKKI TLFPWENLDEFEWKYIQSYVTTALDSNTRKAEGGSLHEIEYIAQKTRENKKVYLIGYIFERDGSKLKWKEVLSKVQLGGE RTYGWGRVVVSSIMETHKLDYPGYKVELNEDTPIVKASKSDSKPYALISHVLFDEQLNNHIVRGNIEPLVGLETNMKNGN FGSKVSTAKICWTPGTVFEEEYSFLICQKGIWKFES
Sequences:
>Translated_276_residues MSWKMYKVVLQLLSPLHIGKRKIGNLQQTRYYVPGRTLWGALTARIAREYENFDYEKTGKDVDEFLRFCYFYPSDDDKKI TLFPWENLDEFEWKYIQSYVTTALDSNTRKAEGGSLHEIEYIAQKTRENKKVYLIGYIFERDGSKLKWKEVLSKVQLGGE RTYGWGRVVVSSIMETHKLDYPGYKVELNEDTPIVKASKSDSKPYALISHVLFDEQLNNHIVRGNIEPLVGLETNMKNGN FGSKVSTAKICWTPGTVFEEEYSFLICQKGIWKFES >Mature_275_residues SWKMYKVVLQLLSPLHIGKRKIGNLQQTRYYVPGRTLWGALTARIAREYENFDYEKTGKDVDEFLRFCYFYPSDDDKKIT LFPWENLDEFEWKYIQSYVTTALDSNTRKAEGGSLHEIEYIAQKTRENKKVYLIGYIFERDGSKLKWKEVLSKVQLGGER TYGWGRVVVSSIMETHKLDYPGYKVELNEDTPIVKASKSDSKPYALISHVLFDEQLNNHIVRGNIEPLVGLETNMKNGNF GSKVSTAKICWTPGTVFEEEYSFLICQKGIWKFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32156; Mature: 32025
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKMYKVVLQLLSPLHIGKRKIGNLQQTRYYVPGRTLWGALTARIAREYENFDYEKTGK CCHHHHHHHHHHHHHHHHHHHHHCCHHHCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC DVDEFLRFCYFYPSDDDKKITLFPWENLDEFEWKYIQSYVTTALDSNTRKAEGGSLHEIE CHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH YIAQKTRENKKVYLIGYIFERDGSKLKWKEVLSKVQLGGERTYGWGRVVVSSIMETHKLD HHHHHHCCCCEEEEEEEEEECCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC YPGYKVELNEDTPIVKASKSDSKPYALISHVLFDEQLNNHIVRGNIEPLVGLETNMKNGN CCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCC FGSKVSTAKICWTPGTVFEEEYSFLICQKGIWKFES CCCCCCEEEEEECCCCCHHHCCCEEEECCCCCCCCC >Mature Secondary Structure SWKMYKVVLQLLSPLHIGKRKIGNLQQTRYYVPGRTLWGALTARIAREYENFDYEKTGK CHHHHHHHHHHHHHHHHHHHHHCCHHHCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC DVDEFLRFCYFYPSDDDKKITLFPWENLDEFEWKYIQSYVTTALDSNTRKAEGGSLHEIE CHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH YIAQKTRENKKVYLIGYIFERDGSKLKWKEVLSKVQLGGERTYGWGRVVVSSIMETHKLD HHHHHHCCCCEEEEEEEEEECCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC YPGYKVELNEDTPIVKASKSDSKPYALISHVLFDEQLNNHIVRGNIEPLVGLETNMKNGN CCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCC FGSKVSTAKICWTPGTVFEEEYSFLICQKGIWKFES CCCCCCEEEEEECCCCCHHHCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA