| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616983
Identifier: 239616983
GI number: 239616983
Start: 629606
End: 630442
Strand: Reverse
Name: 239616983
Synonym: Kole_0582
Alternate gene names: NA
Gene position: 630442-629606 (Counterclockwise)
Preceding gene: 239616984
Following gene: 239616979
Centisome position: 27.39
GC content: 38.95
Gene sequence:
>837_bases TTGAAATACGGTATTAGAATTGAGAGTCCAAGATTTGGTAAGCACGACTTTGTCGTGGGTACGAATCCCTTCGGGATTGG TACGACTGGCTGCGCCAGTGGTGCGAACTCTTTCAGAGTTGTTCCGAACTGCTTCGCAGTGGTTATGCGGGCTCAAAAGA GAAGCGTTGTTTTTATTCTCATCTTCTCGGGTTCTCGCCTTCTCGGATTCTCGATGTTTTTCGAACAACCTACAACGATT ATTGTAATAGGGGTGATAAATGGTATGAAAAAGTTTATTGCCGTGATGTTTTTAATGGTGTTATTGTTGAGGTTTGCCTT AGCGGAGGGCATACCTGAAGAAATTCTTCCTATATTTGCTATCCCTGAATACGATAAAAGCAACGGAATTGTTGAGGTGT TCGTGTCTCAAAAGGAATGTGTCAGGGGAATAGATTACGAGATAACAGTGGTCTTTAAGGATGAAGATCACCCCGATTGT TTCATAAATGTGATTTATGACATTTACAGATTCTTTAAATATGGGCGAATCGAAGATATCGAGACTTTTCATATCATAAC TGATAAAAATGGAAAGCTTTTAGAATTAAGATTTTTCGGTACTTTTTCCGGCAAGCATCATTTCAAGGATACGAAAGATT TGCATGGTGATGCGATTATTCCTTTCAATGAAGTTGTATTCAGAGATGGAAGACCAGTAATATGCGTAAACACATGGAAT CATATGTTTGGAATTGATCCCTCCTTCGAATTAGAAGAAATGTTGTTGATTAAGGATTATGAAGTATCGGAAGGAACCCG CTATGATGCGGAGGTTGAGTATTCTTTTTTGTATTGA
Upstream 100 bases:
>100_bases GTTCTCAACGATTTTATTAATGAGATTGAGAATGGACCACCATTTGCGTATGTTAGTAAAGTCGAACTTGAAGAACTATC ACCGGTGCATTTCGATTCTT
Downstream 100 bases:
>100_bases ATTGAGATTCGAGAGGACCGCTGCACTGCGGGTAAGCACGCTGTGCGCTGCTTCGCAGCGATACGAATCCCTTCGGGATT GTTGCGAACTCTTTCAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKYGIRIESPRFGKHDFVVGTNPFGIGTTGCASGANSFRVVPNCFAVVMRAQKRSVVFILIFSGSRLLGFSMFFEQPTTI IVIGVINGMKKFIAVMFLMVLLLRFALAEGIPEEILPIFAIPEYDKSNGIVEVFVSQKECVRGIDYEITVVFKDEDHPDC FINVIYDIYRFFKYGRIEDIETFHIITDKNGKLLELRFFGTFSGKHHFKDTKDLHGDAIIPFNEVVFRDGRPVICVNTWN HMFGIDPSFELEEMLLIKDYEVSEGTRYDAEVEYSFLY
Sequences:
>Translated_278_residues MKYGIRIESPRFGKHDFVVGTNPFGIGTTGCASGANSFRVVPNCFAVVMRAQKRSVVFILIFSGSRLLGFSMFFEQPTTI IVIGVINGMKKFIAVMFLMVLLLRFALAEGIPEEILPIFAIPEYDKSNGIVEVFVSQKECVRGIDYEITVVFKDEDHPDC FINVIYDIYRFFKYGRIEDIETFHIITDKNGKLLELRFFGTFSGKHHFKDTKDLHGDAIIPFNEVVFRDGRPVICVNTWN HMFGIDPSFELEEMLLIKDYEVSEGTRYDAEVEYSFLY >Mature_278_residues MKYGIRIESPRFGKHDFVVGTNPFGIGTTGCASGANSFRVVPNCFAVVMRAQKRSVVFILIFSGSRLLGFSMFFEQPTTI IVIGVINGMKKFIAVMFLMVLLLRFALAEGIPEEILPIFAIPEYDKSNGIVEVFVSQKECVRGIDYEITVVFKDEDHPDC FINVIYDIYRFFKYGRIEDIETFHIITDKNGKLLELRFFGTFSGKHHFKDTKDLHGDAIIPFNEVVFRDGRPVICVNTWN HMFGIDPSFELEEMLLIKDYEVSEGTRYDAEVEYSFLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31880; Mature: 31880
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYGIRIESPRFGKHDFVVGTNPFGIGTTGCASGANSFRVVPNCFAVVMRAQKRSVVFIL CCCCEEECCCCCCCCCEEEECCCCCCCCCHHCCCCCCEEEHHHHHHHHHHHCCCCEEEEE IFSGSRLLGFSMFFEQPTTIIVIGVINGMKKFIAVMFLMVLLLRFALAEGIPEEILPIFA EECCCCEEEEEEHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEE IPEYDKSNGIVEVFVSQKECVRGIDYEITVVFKDEDHPDCFINVIYDIYRFFKYGRIEDI CCCCCCCCCEEEEEECHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC ETFHIITDKNGKLLELRFFGTFSGKHHFKDTKDLHGDAIIPFNEVVFRDGRPVICVNTWN EEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCHHHEEEECCCCEEEEECCC HMFGIDPSFELEEMLLIKDYEVSEGTRYDAEVEYSFLY CEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEC >Mature Secondary Structure MKYGIRIESPRFGKHDFVVGTNPFGIGTTGCASGANSFRVVPNCFAVVMRAQKRSVVFIL CCCCEEECCCCCCCCCEEEECCCCCCCCCHHCCCCCCEEEHHHHHHHHHHHCCCCEEEEE IFSGSRLLGFSMFFEQPTTIIVIGVINGMKKFIAVMFLMVLLLRFALAEGIPEEILPIFA EECCCCEEEEEEHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEE IPEYDKSNGIVEVFVSQKECVRGIDYEITVVFKDEDHPDCFINVIYDIYRFFKYGRIEDI CCCCCCCCCEEEEEECHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC ETFHIITDKNGKLLELRFFGTFSGKHHFKDTKDLHGDAIIPFNEVVFRDGRPVICVNTWN EEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCHHHEEEECCCCEEEEECCC HMFGIDPSFELEEMLLIKDYEVSEGTRYDAEVEYSFLY CEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA