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The map label for this gene is nqo9 [H]

Identifier: 239616963

GI number: 239616963

Start: 612021

End: 612629

Strand: Reverse

Name: nqo9 [H]

Synonym: Kole_0561

Alternate gene names: 239616963

Gene position: 612629-612021 (Counterclockwise)

Preceding gene: 239616964

Following gene: 239616962

Centisome position: 26.61

GC content: 40.56

Gene sequence:

>609_bases
ATGATGACTCCGAAAATTAGAGAGATAAAGGAAGCTATTTCCAACATCTTTTCTAAAAGGTTTACAACGAAGTTCCCCTT
TGAAGTTTATGAACCTGTCGAAACTTACAGGGGAAAGCCTCTCTTCAACCCCGAAAAATGTGTCGGATGCGGTGCATGTG
TCCAGGTTTGCCCTGCGAAAGCGATAGACATGGTGGATGACCTGGTTGAAAAGGTAAGGGTCTTAACTGTGAAGTATACC
GATTGCATATATTGCGGACAATGCCAGGAAAAGTGCATTGTTGAAGATGGAATCGTTCAAACTACAGATTTTACGACCGC
AACCTTTGATAGATCAGAAGAAAGAAATTACAACTGTATTGAAAAAGAACTCGTCTTCTGTGAGAGATGTGGGGCAATTA
TCACAACTGTTGATCATCTTAAATGGCTTATAAAAAGACTTGGGGCTTACACCTATGGTAATCCAAATCTTGTCCTGATA
AAACTAACAGATCTGGGATATTCCTTTCCTGAAATGCGACCAAGAGAGATCATCAGGAGAGAAGAACTCTTTAAACTTCT
TTGCCCGAAATGCCGGCATCTTGTCGTTGTTGAAGATGCGTTTAAGTAA

Upstream 100 bases:

>100_bases
GCCCATGCAATTTCAAGAGCTGCTTACAGGAGCGGTGTGAAGCCTTTTAAAGGTACTGTTGTAGATATGTACGGTGAAAG
TCTGAAGGAGAGTGAAAATA

Downstream 100 bases:

>100_bases
AATCGAGGAATTTTTATTGAAGTTGAGAAAGCGCCAGGTGCTTTTCGTGGGGCTTGGAAATCCGTTGAGGTCAGATGATA
CAGCTGGTTTATTAATCATA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NADH dehydrogenase I subunit 9; NDH-1 subunit 9 [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MMTPKIREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVRVLTVKYT
DCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCERCGAIITTVDHLKWLIKRLGAYTYGNPNLVLI
KLTDLGYSFPEMRPREIIRREELFKLLCPKCRHLVVVEDAFK

Sequences:

>Translated_202_residues
MMTPKIREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVRVLTVKYT
DCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCERCGAIITTVDHLKWLIKRLGAYTYGNPNLVLI
KLTDLGYSFPEMRPREIIRREELFKLLCPKCRHLVVVEDAFK
>Mature_202_residues
MMTPKIREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAKAIDMVDDLVEKVRVLTVKYT
DCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCIEKELVFCERCGAIITTVDHLKWLIKRLGAYTYGNPNLVLI
KLTDLGYSFPEMRPREIIRREELFKLLCPKCRHLVVVEDAFK

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton transloca

COG id: COG1143

COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1789075, Length=71, Percent_Identity=38.0281690140845, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012285
- InterPro:   IPR010226 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 23377; Mature: 23377

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPKIREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAK
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHH
AIDMVDDLVEKVRVLTVKYTDCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCI
HHHHHHHHHHHHHHHEEEECCEEECCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHH
EKELVFCERCGAIITTVDHLKWLIKRLGAYTYGNPNLVLIKLTDLGYSFPEMRPREIIRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH
EELFKLLCPKCRHLVVVEDAFK
HHHHHHHCHHHCEEEEEECCCC
>Mature Secondary Structure
MMTPKIREIKEAISNIFSKRFTTKFPFEVYEPVETYRGKPLFNPEKCVGCGACVQVCPAK
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHH
AIDMVDDLVEKVRVLTVKYTDCIYCGQCQEKCIVEDGIVQTTDFTTATFDRSEERNYNCI
HHHHHHHHHHHHHHHEEEECCEEECCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCHHH
EKELVFCERCGAIITTVDHLKWLIKRLGAYTYGNPNLVLIKLTDLGYSFPEMRPREIIRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH
EELFKLLCPKCRHLVVVEDAFK
HHHHHHHCHHHCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA