| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616943
Identifier: 239616943
GI number: 239616943
Start: 593756
End: 594358
Strand: Reverse
Name: 239616943
Synonym: Kole_0541
Alternate gene names: NA
Gene position: 594358-593756 (Counterclockwise)
Preceding gene: 239616944
Following gene: 239616942
Centisome position: 25.82
GC content: 41.29
Gene sequence:
>603_bases GTGACCAAGACTTGTAAAACCCATACAGCACAAAGACGAAGAAGGACAGGGAAATACAAAGACCCCCAATCCAGTTGGAC AAAGACGACAAAAGGCTGGGAATACGGAAGAAAGGTACATATGAGTTTGGATGCACAGAACCTATTGATTCAAGATTGGA TGACAACGCCAGCAGCTGTACACGATTCGACGGTGGCAAAGGCACAAATAGATTCTGGCCAGGGATATAAGTATTTCCTC GCAGACAGCGCATATGATTCGCAACAGATATACCGTTATATATTCGATTGTAGTAGCATGATACCAGTAATAGACACAAA CAAAAGGAAAGGTGTATCACTGGAAAAACAGTGTCAGGCTCGTTGGCTGGGCATTCAATTGAGGCAAATATATGCGGAGA AGTATAAAAACCGTTGGGAGATAGAGAGAACGATTAACATTCTACAAGAATATTTCAATCTGGAATACATTTGGTATGTG AGAAACAGGAATTATGATGCGGTATTGGGTTTGGCCATATTGGCATACAATCTTTGTGTTATGTTCAATATCTTGAACAG CCGTCCTCACAGAAAGGTGGCTGATATTATTGGCTGTTACTGA
Upstream 100 bases:
>100_bases GTAAGAGAATTGCCTCTTCACAGGATAAACAAAGATGTTGTAAACCTCTTTTTGGATATAGAAGGACTTGAAAGGATTGA GTTGGTGGTGGATTCCTTTC
Downstream 100 bases:
>100_bases TTTTTGAGACACCCTACGGTCTTCCTGTATCAACAACACAGGCGGTTGTTGGTGCTCTTACTGGTGCAGGCCTTTTGATA AACGGACATGTAGATGCTGG
Product: transposase IS4 family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTKTCKTHTAQRRRRTGKYKDPQSSWTKTTKGWEYGRKVHMSLDAQNLLIQDWMTTPAAVHDSTVAKAQIDSGQGYKYFL ADSAYDSQQIYRYIFDCSSMIPVIDTNKRKGVSLEKQCQARWLGIQLRQIYAEKYKNRWEIERTINILQEYFNLEYIWYV RNRNYDAVLGLAILAYNLCVMFNILNSRPHRKVADIIGCY
Sequences:
>Translated_200_residues MTKTCKTHTAQRRRRTGKYKDPQSSWTKTTKGWEYGRKVHMSLDAQNLLIQDWMTTPAAVHDSTVAKAQIDSGQGYKYFL ADSAYDSQQIYRYIFDCSSMIPVIDTNKRKGVSLEKQCQARWLGIQLRQIYAEKYKNRWEIERTINILQEYFNLEYIWYV RNRNYDAVLGLAILAYNLCVMFNILNSRPHRKVADIIGCY >Mature_199_residues TKTCKTHTAQRRRRTGKYKDPQSSWTKTTKGWEYGRKVHMSLDAQNLLIQDWMTTPAAVHDSTVAKAQIDSGQGYKYFLA DSAYDSQQIYRYIFDCSSMIPVIDTNKRKGVSLEKQCQARWLGIQLRQIYAEKYKNRWEIERTINILQEYFNLEYIWYVR NRNYDAVLGLAILAYNLCVMFNILNSRPHRKVADIIGCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23590; Mature: 23459
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTCKTHTAQRRRRTGKYKDPQSSWTKTTKGWEYGRKVHMSLDAQNLLIQDWMTTPAAV CCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCEEEEEECCHHHHHHHHCCCCCHH HDSTVAKAQIDSGQGYKYFLADSAYDSQQIYRYIFDCSSMIPVIDTNKRKGVSLEKQCQA CCCHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH RWLGIQLRQIYAEKYKNRWEIERTINILQEYFNLEYIWYVRNRNYDAVLGLAILAYNLCV HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHH MFNILNSRPHRKVADIIGCY HHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure TKTCKTHTAQRRRRTGKYKDPQSSWTKTTKGWEYGRKVHMSLDAQNLLIQDWMTTPAAV CCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCEEEEEECCHHHHHHHHCCCCCHH HDSTVAKAQIDSGQGYKYFLADSAYDSQQIYRYIFDCSSMIPVIDTNKRKGVSLEKQCQA CCCHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH RWLGIQLRQIYAEKYKNRWEIERTINILQEYFNLEYIWYVRNRNYDAVLGLAILAYNLCV HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHH MFNILNSRPHRKVADIIGCY HHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA