| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616901
Identifier: 239616901
GI number: 239616901
Start: 541869
End: 543116
Strand: Reverse
Name: 239616901
Synonym: Kole_0496
Alternate gene names: NA
Gene position: 543116-541869 (Counterclockwise)
Preceding gene: 239616902
Following gene: 239616900
Centisome position: 23.59
GC content: 39.18
Gene sequence:
>1248_bases ATGATAAATAATGAAGAAAAGATTATTGAAACCTTAAAGCGGATAAATAAAATAATAGAAGATGAGGGTATTAGGAAAAA GTACTGGTTTGATTATCCGAAGCTGCCGGTAGCGTTGTATAACGATGAGAAGATATTTTTGGTTGGTTATCCAGGAAAGC CTGCAGGTTTTGAGGAAAGCGACGGAATTCTTATTGGAAAAAAAGATGAAAGGTTCTATGGAAACACCGCTAAAGATCTT GAAGGGCAGCAGGTCGCCATATGGGATCTTACAACCATATCACCTACTGTCTCTTTCGAGAGGTTTCTCTCTTTAATTTT TCATGAGGGTTTTCACGGATATCAAAAATCTGTTGGAGAAAAACGCTGGGCAAATGATCTCCAGGTTCTCGATTATCCCT TTACCCCAATGAACCTTGCAGTGAGGTTTCTTGAGAGAAGAGAGCTACTGAGGGCAACATTTGCAGATGAGAAGAGAGAG TTTGAAGAAAGGCTATCGTCTTTTATAGCAATCAGGGAATTTAGAAGAAAACTTATAGGTGATGCGTTGAATTACGAGTT AGCACAAGAAAGTGTAGAAGGAGTCGCTGTATATGTGGAAACAAAAGCTTACAGTGACTTTGGTTCTATTCCTTTGAAGT ACGCTATCGCTTATCAAGCGAACGGGATGTCTGAATTTCCAGCTTCTCTCTCAAGTTTTAGATTGAGCTGCTACGCGCCG GGGATGTGCCTTGCATTCCTACTTGACAGGTTTCAGGCAGGCTGGCAAAAGGATTATATGGAATCGGGAGAGTACATCTA CGATTTCCTGAAAAAACTTTCCGGATTATCCTTTAATAACTTTTCAGAAGATTCAGTTCCATCAGAAGTTTTGGAAAATG CCGGGTATATCTTAGATAAACACAGAAAATATATAGATGAAGAATTCAGAAATTTTGAAAATTCAGCGGGATACAGGATA ACGTTGAAAGGGATTTTTCCTTTGATGGGTATGGATCCTATGAACATTCTATGGAAAGAAGACTATATTATAAACAAGTA TTTCTTTGCCACGCAATTCAAGGGAGTTCCAGTTTTTCTAAAGCAAAAGAGTATGGTCAAGAGAATAGAGAAAAGCTTTA CTTTTTCCGAGGTTGTCTTTTATCTACCGGAGAAACCGGTACAAAATGGGGACAAAGTTGAAATCCCGGGCATTGGAGTA TTTCCGGCAAGGTTGGAAGAAGATGTAAGAGGTTTTGCCGTGGTTTGA
Upstream 100 bases:
>100_bases TTGCTGATTGTCTCAAAAAAGGGAGCCAGGAATTTTTCAAATTATTTGCTGATACAGAAGAAGGTAGGATTTTTCCAGAG GAAATTAAGGAGGTGTTGTT
Downstream 100 bases:
>100_bases ACACACTCTTTGACCCGATCTTTATCTAAACTCTAATCTCCAACATCCATTCTCGCTTTTGATTTTTAATCCCGGATCTC GGGATCTCGGATCTCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MINNEEKIIETLKRINKIIEDEGIRKKYWFDYPKLPVALYNDEKIFLVGYPGKPAGFEESDGILIGKKDERFYGNTAKDL EGQQVAIWDLTTISPTVSFERFLSLIFHEGFHGYQKSVGEKRWANDLQVLDYPFTPMNLAVRFLERRELLRATFADEKRE FEERLSSFIAIREFRRKLIGDALNYELAQESVEGVAVYVETKAYSDFGSIPLKYAIAYQANGMSEFPASLSSFRLSCYAP GMCLAFLLDRFQAGWQKDYMESGEYIYDFLKKLSGLSFNNFSEDSVPSEVLENAGYILDKHRKYIDEEFRNFENSAGYRI TLKGIFPLMGMDPMNILWKEDYIINKYFFATQFKGVPVFLKQKSMVKRIEKSFTFSEVVFYLPEKPVQNGDKVEIPGIGV FPARLEEDVRGFAVV
Sequences:
>Translated_415_residues MINNEEKIIETLKRINKIIEDEGIRKKYWFDYPKLPVALYNDEKIFLVGYPGKPAGFEESDGILIGKKDERFYGNTAKDL EGQQVAIWDLTTISPTVSFERFLSLIFHEGFHGYQKSVGEKRWANDLQVLDYPFTPMNLAVRFLERRELLRATFADEKRE FEERLSSFIAIREFRRKLIGDALNYELAQESVEGVAVYVETKAYSDFGSIPLKYAIAYQANGMSEFPASLSSFRLSCYAP GMCLAFLLDRFQAGWQKDYMESGEYIYDFLKKLSGLSFNNFSEDSVPSEVLENAGYILDKHRKYIDEEFRNFENSAGYRI TLKGIFPLMGMDPMNILWKEDYIINKYFFATQFKGVPVFLKQKSMVKRIEKSFTFSEVVFYLPEKPVQNGDKVEIPGIGV FPARLEEDVRGFAVV >Mature_415_residues MINNEEKIIETLKRINKIIEDEGIRKKYWFDYPKLPVALYNDEKIFLVGYPGKPAGFEESDGILIGKKDERFYGNTAKDL EGQQVAIWDLTTISPTVSFERFLSLIFHEGFHGYQKSVGEKRWANDLQVLDYPFTPMNLAVRFLERRELLRATFADEKRE FEERLSSFIAIREFRRKLIGDALNYELAQESVEGVAVYVETKAYSDFGSIPLKYAIAYQANGMSEFPASLSSFRLSCYAP GMCLAFLLDRFQAGWQKDYMESGEYIYDFLKKLSGLSFNNFSEDSVPSEVLENAGYILDKHRKYIDEEFRNFENSAGYRI TLKGIFPLMGMDPMNILWKEDYIINKYFFATQFKGVPVFLKQKSMVKRIEKSFTFSEVVFYLPEKPVQNGDKVEIPGIGV FPARLEEDVRGFAVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48072; Mature: 48072
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNEEKIIETLKRINKIIEDEGIRKKYWFDYPKLPVALYNDEKIFLVGYPGKPAGFEES CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCC DGILIGKKDERFYGNTAKDLEGQQVAIWDLTTISPTVSFERFLSLIFHEGFHGYQKSVGE CCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCH KRWANDLQVLDYPFTPMNLAVRFLERRELLRATFADEKREFEERLSSFIAIREFRRKLIG HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALNYELAQESVEGVAVYVETKAYSDFGSIPLKYAIAYQANGMSEFPASLSSFRLSCYAP HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHCCCHHHHHHHHCCC GMCLAFLLDRFQAGWQKDYMESGEYIYDFLKKLSGLSFNNFSEDSVPSEVLENAGYILDK HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH HRKYIDEEFRNFENSAGYRITLKGIFPLMGMDPMNILWKEDYIINKYFFATQFKGVPVFL HHHHHHHHHHCCCCCCCEEEEEEECCHHCCCCCCHHEECCCEEEEHEEEEEECCCCCEEE KQKSMVKRIEKSFTFSEVVFYLPEKPVQNGDKVEIPGIGVFPARLEEDVRGFAVV HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCEECC >Mature Secondary Structure MINNEEKIIETLKRINKIIEDEGIRKKYWFDYPKLPVALYNDEKIFLVGYPGKPAGFEES CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCC DGILIGKKDERFYGNTAKDLEGQQVAIWDLTTISPTVSFERFLSLIFHEGFHGYQKSVGE CCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCH KRWANDLQVLDYPFTPMNLAVRFLERRELLRATFADEKREFEERLSSFIAIREFRRKLIG HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALNYELAQESVEGVAVYVETKAYSDFGSIPLKYAIAYQANGMSEFPASLSSFRLSCYAP HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHCCCHHHHHHHHCCC GMCLAFLLDRFQAGWQKDYMESGEYIYDFLKKLSGLSFNNFSEDSVPSEVLENAGYILDK HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHH HRKYIDEEFRNFENSAGYRITLKGIFPLMGMDPMNILWKEDYIINKYFFATQFKGVPVFL HHHHHHHHHHCCCCCCCEEEEEEECCHHCCCCCCHHEECCCEEEEHEEEEEECCCCCEEE KQKSMVKRIEKSFTFSEVVFYLPEKPVQNGDKVEIPGIGVFPARLEEDVRGFAVV HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA