| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616890
Identifier: 239616890
GI number: 239616890
Start: 524065
End: 525126
Strand: Reverse
Name: 239616890
Synonym: Kole_0485
Alternate gene names: NA
Gene position: 525126-524065 (Counterclockwise)
Preceding gene: 239616895
Following gene: 239616870
Centisome position: 22.81
GC content: 43.13
Gene sequence:
>1062_bases GTGAAGGTTATTAAGTTAAACATTGGGGGTTTGAAGCCAAAAATTCCTCTTATACAGGGTGGTATGGCTGTTGGTATATC ACTTGACAATCTCGCTTCAGCGGTTGCCAATGAAGGCGGGATAGGGGTTATAGGCACAGCCGGCATAGGAATGATGGTGG GAGGTAATAGAAGGAATTTTGAGCAGGCGAGCATAGAAGGCTTAAAAAGGATCATTCGAAATGCTCGCGAAAAAACCAAC GGCATTCTTGGTGTGAATATCATGGTTGCATTGACCAATTATAAGGATATGGTGACTACGGCGATCAAGGAAAAGATAGA TGTCATAATTTCTGGAGCCGGATTGCCGCTGGATCTGCCTTCTTTTTTAAGTGAGGGTTCAAAAACCAGGTTGATTCCAA TAGTATCTTCGTTGAGATCTGCTCAACTTATTTTCAGGAGATGGTTGAAAAGGCATAACTATATACCGGATGCTTTTGTG GTTGAAGGACCAAAAGCCGGAGGACATTTAGGATACCGTCCAGAACAGCTCGATGATCCTGAGTCTTCACTTGAGAGGAC TATTCCTCAGATACGTGATTTTACCGAAGAGATTAAAAGGGAGTATGGTAAGGAGGTTCCTGTTATTGCTGCCGGGGGGA TATACAGCTCTGATGACGTGAAAAGAGTGTTCTCGTTGGGAGCGTCTGGAATACAGGTAGGAACCCCGTTTATTGCAACT GAGGAATGCGATGCGGATATCAGGTTTAAGGAAACGATCGTGAACGCTAAAAAAGAGGACATAGTGATTATCAAAAGCCC GGTTGGTTTACCCGGTAGGGCTGTGCGGAATAAATTCATCGAAGATGTTGAAGCGGGAAAGAAAAAGCCATTCAGATGTG GGTTTCATTGTATAAAGACGTGTAATGTCAAAGATGCTCCATATTGTATAGCCGAGGCCCTTTTGAATGCTTCAAAAGGG AACCTTGAAGATGGGTTTGCTTTTATCGGAGCTATGGGATATAAAATCAACAAAATCACGACCGTTAAGGAAGTAATCAG AAAGCTTTTTAAGGGAGTGTGA
Upstream 100 bases:
>100_bases CTTTTTTTTGGGATATGGTTTTATGTTAGAATTCTCCTAAAGTAAAACAAGTAAAATGTAGAAATCGGAAATCCTTATTT TGTTTTGATTTGAAAGGAGC
Downstream 100 bases:
>100_bases TAAACCACTAGATCAGAGAATCCGAGAGACCGAGAAAGCCGCTTCACGGCGGATACGAATCCCTTCGGGATTGTCACGAA CTCCTTCGGAGTTGACCCGA
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKVIKLNIGGLKPKIPLIQGGMAVGISLDNLASAVANEGGIGVIGTAGIGMMVGGNRRNFEQASIEGLKRIIRNAREKTN GILGVNIMVALTNYKDMVTTAIKEKIDVIISGAGLPLDLPSFLSEGSKTRLIPIVSSLRSAQLIFRRWLKRHNYIPDAFV VEGPKAGGHLGYRPEQLDDPESSLERTIPQIRDFTEEIKREYGKEVPVIAAGGIYSSDDVKRVFSLGASGIQVGTPFIAT EECDADIRFKETIVNAKKEDIVIIKSPVGLPGRAVRNKFIEDVEAGKKKPFRCGFHCIKTCNVKDAPYCIAEALLNASKG NLEDGFAFIGAMGYKINKITTVKEVIRKLFKGV
Sequences:
>Translated_353_residues MKVIKLNIGGLKPKIPLIQGGMAVGISLDNLASAVANEGGIGVIGTAGIGMMVGGNRRNFEQASIEGLKRIIRNAREKTN GILGVNIMVALTNYKDMVTTAIKEKIDVIISGAGLPLDLPSFLSEGSKTRLIPIVSSLRSAQLIFRRWLKRHNYIPDAFV VEGPKAGGHLGYRPEQLDDPESSLERTIPQIRDFTEEIKREYGKEVPVIAAGGIYSSDDVKRVFSLGASGIQVGTPFIAT EECDADIRFKETIVNAKKEDIVIIKSPVGLPGRAVRNKFIEDVEAGKKKPFRCGFHCIKTCNVKDAPYCIAEALLNASKG NLEDGFAFIGAMGYKINKITTVKEVIRKLFKGV >Mature_353_residues MKVIKLNIGGLKPKIPLIQGGMAVGISLDNLASAVANEGGIGVIGTAGIGMMVGGNRRNFEQASIEGLKRIIRNAREKTN GILGVNIMVALTNYKDMVTTAIKEKIDVIISGAGLPLDLPSFLSEGSKTRLIPIVSSLRSAQLIFRRWLKRHNYIPDAFV VEGPKAGGHLGYRPEQLDDPESSLERTIPQIRDFTEEIKREYGKEVPVIAAGGIYSSDDVKRVFSLGASGIQVGTPFIAT EECDADIRFKETIVNAKKEDIVIIKSPVGLPGRAVRNKFIEDVEAGKKKPFRCGFHCIKTCNVKDAPYCIAEALLNASKG NLEDGFAFIGAMGYKINKITTVKEVIRKLFKGV
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 38312; Mature: 38312
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIKLNIGGLKPKIPLIQGGMAVGISLDNLASAVANEGGIGVIGTAGIGMMVGGNRRNF CEEEEEECCCCCCCCCEEECCEEEEEEHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCH EQASIEGLKRIIRNAREKTNGILGVNIMVALTNYKDMVTTAIKEKIDVIISGAGLPLDLP HHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCCH SFLSEGSKTRLIPIVSSLRSAQLIFRRWLKRHNYIPDAFVVEGPKAGGHLGYRPEQLDDP HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC ESSLERTIPQIRDFTEEIKREYGKEVPVIAAGGIYSSDDVKRVFSLGASGIQVGTPFIAT HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEECCCEEEE EECDADIRFKETIVNAKKEDIVIIKSPVGLPGRAVRNKFIEDVEAGKKKPFRCGFHCIKT CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHCHHHHEE CNVKDAPYCIAEALLNASKGNLEDGFAFIGAMGYKINKITTVKEVIRKLFKGV CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVIKLNIGGLKPKIPLIQGGMAVGISLDNLASAVANEGGIGVIGTAGIGMMVGGNRRNF CEEEEEECCCCCCCCCEEECCEEEEEEHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCH EQASIEGLKRIIRNAREKTNGILGVNIMVALTNYKDMVTTAIKEKIDVIISGAGLPLDLP HHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCCH SFLSEGSKTRLIPIVSSLRSAQLIFRRWLKRHNYIPDAFVVEGPKAGGHLGYRPEQLDDP HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC ESSLERTIPQIRDFTEEIKREYGKEVPVIAAGGIYSSDDVKRVFSLGASGIQVGTPFIAT HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEECCCEEEE EECDADIRFKETIVNAKKEDIVIIKSPVGLPGRAVRNKFIEDVEAGKKKPFRCGFHCIKT CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHCHHHHEE CNVKDAPYCIAEALLNASKGNLEDGFAFIGAMGYKINKITTVKEVIRKLFKGV CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA