| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is dck [H]
Identifier: 239616711
GI number: 239616711
Start: 330733
End: 331347
Strand: Direct
Name: dck [H]
Synonym: Kole_0304
Alternate gene names: 239616711
Gene position: 330733-331347 (Clockwise)
Preceding gene: 239616706
Following gene: 239616712
Centisome position: 14.37
GC content: 39.19
Gene sequence:
>615_bases ATGGGGAAAATGATTGTTTTTGCAGGAAATGTTGGATCAGGAAAAACAACTATCGCCAGAGCACTTGCAGATGCTCTCGG CTTTGAGATTCATTTTGAGTCCGTCAGTGATAACCCTTTTCTTGAAGATTTTTATCATAACCAGCGAAAGTGGGCATATC ATCTACAGACTTTTTTCCTGATTCATAGATTTACAGCACTGAAAGAAGCAATGGAAAAAGGGTCCAACATCGTTTTTGAT CGCTCTATTTACGAAGATGCGGAGATTTTTGCCAGGAATCTCTACGAAACCGGAAAGATGGAGAAACGCGAATTTGAGAC TTATCTCGATATGTTCTACTCAATGATCAAATACATCCCACATCCCGACCTGCTCGTATTCATCGATGCCGATATCGATA CGATACTTGCACGGATAAGAAAAAGAGGCCGTAATATGGAGCTCGAAGTACCAATAGCCTATTGGCAACAGCTTGCAAAT CTTTATGATTCATGGATAAGTAGGTATGATTATTCGCCAGTGTATAGAATTGATGCAAAATTCGTGGATATTGAAAGATA TCCAGATCATCTGGACAAAATTGTTTCCGACGTCAAAAGAATTTTGAAGATTTGA
Upstream 100 bases:
>100_bases AACTGTAATCAACTTAAGTACCGTTTCAAAGTATTACTGCTCATTACATGATAAAATATCGACTGGTTGGGGTAATTTAA AATATTCGGAGGAATATTTC
Downstream 100 bases:
>100_bases TTTGTGCGGACGGTGAAGTAGTGATGAAAAGAATTCTTTTATTGCTTTTGATTTTTTCCATAATCCTATCCTTTATGCAA CTATCTGCAAACGTCAGCAA
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MGKMIVFAGNVGSGKTTIARALADALGFEIHFESVSDNPFLEDFYHNQRKWAYHLQTFFLIHRFTALKEAMEKGSNIVFD RSIYEDAEIFARNLYETGKMEKREFETYLDMFYSMIKYIPHPDLLVFIDADIDTILARIRKRGRNMELEVPIAYWQQLAN LYDSWISRYDYSPVYRIDAKFVDIERYPDHLDKIVSDVKRILKI
Sequences:
>Translated_204_residues MGKMIVFAGNVGSGKTTIARALADALGFEIHFESVSDNPFLEDFYHNQRKWAYHLQTFFLIHRFTALKEAMEKGSNIVFD RSIYEDAEIFARNLYETGKMEKREFETYLDMFYSMIKYIPHPDLLVFIDADIDTILARIRKRGRNMELEVPIAYWQQLAN LYDSWISRYDYSPVYRIDAKFVDIERYPDHLDKIVSDVKRILKI >Mature_203_residues GKMIVFAGNVGSGKTTIARALADALGFEIHFESVSDNPFLEDFYHNQRKWAYHLQTFFLIHRFTALKEAMEKGSNIVFDR SIYEDAEIFARNLYETGKMEKREFETYLDMFYSMIKYIPHPDLLVFIDADIDTILARIRKRGRNMELEVPIAYWQQLANL YDSWISRYDYSPVYRIDAKFVDIERYPDHLDKIVSDVKRILKI
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
Organism=Homo sapiens, GI290656975, Length=181, Percent_Identity=28.1767955801105, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI290656936, Length=181, Percent_Identity=28.1767955801105, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI4503269, Length=242, Percent_Identity=26.0330578512397, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4758768, Length=186, Percent_Identity=27.4193548387097, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI290657203, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI17738037, Length=171, Percent_Identity=27.4853801169591, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 24177; Mature: 24046
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKMIVFAGNVGSGKTTIARALADALGFEIHFESVSDNPFLEDFYHNQRKWAYHLQTFFL CCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHH IHRFTALKEAMEKGSNIVFDRSIYEDAEIFARNLYETGKMEKREFETYLDMFYSMIKYIP HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC HPDLLVFIDADIDTILARIRKRGRNMELEVPIAYWQQLANLYDSWISRYDYSPVYRIDAK CCCEEEEEECCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCE FVDIERYPDHLDKIVSDVKRILKI EEEHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKMIVFAGNVGSGKTTIARALADALGFEIHFESVSDNPFLEDFYHNQRKWAYHLQTFFL CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHH IHRFTALKEAMEKGSNIVFDRSIYEDAEIFARNLYETGKMEKREFETYLDMFYSMIKYIP HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC HPDLLVFIDADIDTILARIRKRGRNMELEVPIAYWQQLANLYDSWISRYDYSPVYRIDAK CCCEEEEEECCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCE FVDIERYPDHLDKIVSDVKRILKI EEEHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]