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The map label for this gene is recN [H]

Identifier: 239616666

GI number: 239616666

Start: 285191

End: 286795

Strand: Direct

Name: recN [H]

Synonym: Kole_0259

Alternate gene names: 239616666

Gene position: 285191-286795 (Clockwise)

Preceding gene: 239616658

Following gene: 239616667

Centisome position: 12.39

GC content: 41.56

Gene sequence:

>1605_bases
ATGCTTTTTACTCTATCAGGAAAGAATTTTTTCACCTTCAAAGAATTTTACATGGAGTTTTCTGAAAAGCTGAACGTCAT
AACAGGAGAATCTGGTGCGGGAAAAACGCTTCTTCTGAAAGCCTTGAAAGCAGTAACCGGCTTTTCTCCACAACTCACCG
AACGAAAGGAAGACAGCTATGTCGAAGCCATATTTCTCATGAACGAAGCCCTCCGCAAAAGGGCCGTGGAAATGGGAATC
GAACCCTCTGACGAGATATTGATAAAGGTTAGTTTCGGGCCTCAAAGAACTATATACCGTCTGAACGGAAAAATCACGCC
GCGCCAGGTCATTGCTGAGCTTCTTTCAGACCAGATTGAGATTCACTCTCAACACAGTAGTGTGAAACTTCTCGATAGCT
CAAAACATCACCTGATTCTCGACAACATGATAAGGGATCGTTCCTTGCTAAAGGAATACGCAGAAAAATATAACGAGTTT
GTAAAAGTCAAAAAAGAATTAGGCACCTTCGAAGTAGACCCTGGAAGCATAGCAAGAGAGAAGGATTTTCTGGAATTTCA
GTTGAAAGAGATTGTGGATGCAAAGCTCCAACCCGGTGAGGACATTGAAATTGAACGGAAGTACAAAAAATACACCGACG
CTCAGGAACTCAAGAAAACCTTTACCCTTCTAATGGAGACATTGAAAGATATGGACAATTCGGCTTATGCAATATTATCT
AACATCCTGCACGACCTGGAAGCACTTGAAAAATATGGTTACAAAGATTTTTCCGAACATGCTCGCGTCGCCATTGAGGA
GATCGATTATCTCTACGATATGCTGGTAGCTGAGCTTCCGAATTTTGAGTTCGATGATGAAGAATTCTCGCAAGTCGAGG
CAAGATTTTCGTTGATACAGAATTTGAAGCGAAAGTACGGTCAAACCGTTGAAGAGATAATCGAAACAGGAGAAAAAATA
GCAAACAGACTTAAAGAACTCACAAATCTAGAAGCTAAAAAAGAAAGGTTGGTGGAGAGGGAAAAGGAACTCTACCAGGA
GCTTATCAGACTGGGAAAGGAGATAGATAAAGAACGTCTTGAGGTTGCCAGGATTATAAAGGAGAAGATACAGAAGCATC
TTGATGATCTGAAAATGAAAGGGGCAATTGTTGATTTTCAATTCATACCAAACGAACACCCCACGAGCTCCGGCATTTCA
AAGGTCTCTTTGCTGATCAGGACAAATCCCGGGGGAGGACTGTTAGAGATTTCGAAAGTAGCTTCCGGTGGTGAACTTTC
CCGTATTCTGCTGGCTATAGAATCTGTTTTGAAGGATGAACTTACCTTAAGCACTGTTGTTTTTGATGAAATCGATACCG
GTGTTGGACAGAGGCTTGGAAAGATTGTCGCTGAAAAAGTAAAGGAGATCTCGGATAGTGTCCAATCTATTGTGATAACG
CATATCCCGCAGATCGCGGCTATTGCGGACAGACATTTTACTGTGAACAAAGAGATAATCGGGAATAATACGTATTCCTT
TGTAAAAACTCTCAGCGACCAGGAAAGACAACTTGAACTGAAAGCTATGACTGGAATAATAGGGGAGGAAAGATTATATG
AATAG

Upstream 100 bases:

>100_bases
TGTCAAGGATGGAAAGATTAAGATTAATGTTATTATTACCCACCGAAGGGTCATATGCAAATAGTATAATGTTGTTGAAA
CCAAGAGATGGAGGTTAGAA

Downstream 100 bases:

>100_bases
GGATGAAGTTATAAGGAAGATTGTCGATGAAAAAGGAGAAGAAGCAATTCCTTTGCTTTTAGATCTGCTTGAAAAAGAGG
ACGACGAGGTAGCCAATATA

Product: SMC domain protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MLFTLSGKNFFTFKEFYMEFSEKLNVITGESGAGKTLLLKALKAVTGFSPQLTERKEDSYVEAIFLMNEALRKRAVEMGI
EPSDEILIKVSFGPQRTIYRLNGKITPRQVIAELLSDQIEIHSQHSSVKLLDSSKHHLILDNMIRDRSLLKEYAEKYNEF
VKVKKELGTFEVDPGSIAREKDFLEFQLKEIVDAKLQPGEDIEIERKYKKYTDAQELKKTFTLLMETLKDMDNSAYAILS
NILHDLEALEKYGYKDFSEHARVAIEEIDYLYDMLVAELPNFEFDDEEFSQVEARFSLIQNLKRKYGQTVEEIIETGEKI
ANRLKELTNLEAKKERLVEREKELYQELIRLGKEIDKERLEVARIIKEKIQKHLDDLKMKGAIVDFQFIPNEHPTSSGIS
KVSLLIRTNPGGGLLEISKVASGGELSRILLAIESVLKDELTLSTVVFDEIDTGVGQRLGKIVAEKVKEISDSVQSIVIT
HIPQIAAIADRHFTVNKEIIGNNTYSFVKTLSDQERQLELKAMTGIIGEERLYE

Sequences:

>Translated_534_residues
MLFTLSGKNFFTFKEFYMEFSEKLNVITGESGAGKTLLLKALKAVTGFSPQLTERKEDSYVEAIFLMNEALRKRAVEMGI
EPSDEILIKVSFGPQRTIYRLNGKITPRQVIAELLSDQIEIHSQHSSVKLLDSSKHHLILDNMIRDRSLLKEYAEKYNEF
VKVKKELGTFEVDPGSIAREKDFLEFQLKEIVDAKLQPGEDIEIERKYKKYTDAQELKKTFTLLMETLKDMDNSAYAILS
NILHDLEALEKYGYKDFSEHARVAIEEIDYLYDMLVAELPNFEFDDEEFSQVEARFSLIQNLKRKYGQTVEEIIETGEKI
ANRLKELTNLEAKKERLVEREKELYQELIRLGKEIDKERLEVARIIKEKIQKHLDDLKMKGAIVDFQFIPNEHPTSSGIS
KVSLLIRTNPGGGLLEISKVASGGELSRILLAIESVLKDELTLSTVVFDEIDTGVGQRLGKIVAEKVKEISDSVQSIVIT
HIPQIAAIADRHFTVNKEIIGNNTYSFVKTLSDQERQLELKAMTGIIGEERLYE
>Mature_534_residues
MLFTLSGKNFFTFKEFYMEFSEKLNVITGESGAGKTLLLKALKAVTGFSPQLTERKEDSYVEAIFLMNEALRKRAVEMGI
EPSDEILIKVSFGPQRTIYRLNGKITPRQVIAELLSDQIEIHSQHSSVKLLDSSKHHLILDNMIRDRSLLKEYAEKYNEF
VKVKKELGTFEVDPGSIAREKDFLEFQLKEIVDAKLQPGEDIEIERKYKKYTDAQELKKTFTLLMETLKDMDNSAYAILS
NILHDLEALEKYGYKDFSEHARVAIEEIDYLYDMLVAELPNFEFDDEEFSQVEARFSLIQNLKRKYGQTVEEIIETGEKI
ANRLKELTNLEAKKERLVEREKELYQELIRLGKEIDKERLEVARIIKEKIQKHLDDLKMKGAIVDFQFIPNEHPTSSGIS
KVSLLIRTNPGGGLLEISKVASGGELSRILLAIESVLKDELTLSTVVFDEIDTGVGQRLGKIVAEKVKEISDSVQSIVIT
HIPQIAAIADRHFTVNKEIIGNNTYSFVKTLSDQERQLELKAMTGIIGEERLYE

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=539, Percent_Identity=25.417439703154, Blast_Score=172, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61129; Mature: 61129

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTLSGKNFFTFKEFYMEFSEKLNVITGESGAGKTLLLKALKAVTGFSPQLTERKEDSY
CEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHCCCHHHH
VEAIFLMNEALRKRAVEMGIEPSDEILIKVSFGPQRTIYRLNGKITPRQVIAELLSDQIE
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
IHSQHSSVKLLDSSKHHLILDNMIRDRSLLKEYAEKYNEFVKVKKELGTFEVDPGSIARE
HHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHH
KDFLEFQLKEIVDAKLQPGEDIEIERKYKKYTDAQELKKTFTLLMETLKDMDNSAYAILS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
NILHDLEALEKYGYKDFSEHARVAIEEIDYLYDMLVAELPNFEFDDEEFSQVEARFSLIQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NLKRKYGQTVEEIIETGEKIANRLKELTNLEAKKERLVEREKELYQELIRLGKEIDKERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVARIIKEKIQKHLDDLKMKGAIVDFQFIPNEHPTSSGISKVSLLIRTNPGGGLLEISKV
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEHHH
ASGGELSRILLAIESVLKDELTLSTVVFDEIDTGVGQRLGKIVAEKVKEISDSVQSIVIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIPQIAAIADRHFTVNKEIIGNNTYSFVKTLSDQERQLELKAMTGIIGEERLYE
HCHHHHHHHHCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFTLSGKNFFTFKEFYMEFSEKLNVITGESGAGKTLLLKALKAVTGFSPQLTERKEDSY
CEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHCCCHHHH
VEAIFLMNEALRKRAVEMGIEPSDEILIKVSFGPQRTIYRLNGKITPRQVIAELLSDQIE
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH
IHSQHSSVKLLDSSKHHLILDNMIRDRSLLKEYAEKYNEFVKVKKELGTFEVDPGSIARE
HHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHH
KDFLEFQLKEIVDAKLQPGEDIEIERKYKKYTDAQELKKTFTLLMETLKDMDNSAYAILS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
NILHDLEALEKYGYKDFSEHARVAIEEIDYLYDMLVAELPNFEFDDEEFSQVEARFSLIQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NLKRKYGQTVEEIIETGEKIANRLKELTNLEAKKERLVEREKELYQELIRLGKEIDKERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVARIIKEKIQKHLDDLKMKGAIVDFQFIPNEHPTSSGISKVSLLIRTNPGGGLLEISKV
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEHHH
ASGGELSRILLAIESVLKDELTLSTVVFDEIDTGVGQRLGKIVAEKVKEISDSVQSIVIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIPQIAAIADRHFTVNKEIIGNNTYSFVKTLSDQERQLELKAMTGIIGEERLYE
HCHHHHHHHHCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]