| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616467
Identifier: 239616467
GI number: 239616467
Start: 69397
End: 70290
Strand: Direct
Name: 239616467
Synonym: Kole_0056
Alternate gene names: NA
Gene position: 69397-70290 (Clockwise)
Preceding gene: 239616466
Following gene: 239616470
Centisome position: 3.01
GC content: 37.36
Gene sequence:
>894_bases ATGGACATCATCGCTTTAACTGATGTTAGTTGGTTTAAATTTCTGAGAAAGAAGAACAGAGAGAAAGACTTTAAGTTAAT AAATTTCTGGACGCCAACTGGATGGGAACCAAAGAAAATAAATCCAGGAGACATGTTCTACCTGTTTTTAAAGAGTCCAT ACAGAAAAGTTGGCGGATACGCCAGATATGTTTACTCCTTTCAGTTAACGGTCAGAGATGCCTGGAACAAATTTGGTCAG GCAAATGGTGCTCCAAACATCAATATAATGTTGGAACAATTATCTGCAATTAGAGGAACTCGCATAGATGAAAATACCAT TATTGGTTGCATAATGCTTCAGGATCCAGTTTTTTTACAGGATGACGAGTTTTTCGATTCTCGGGAAATAGGTGTTGAAA TCAAGCAGGCTATGCAGAAGTTCAAGTACATCAAAGGTGCAGAAATAATTAGACCGGAATATACCATCGATAAAATAGGG AATTATGTTCTAAATGAGAAAGTAACGGTTGAATATACATTATCAGCGCATAAAAAGAGAATTGGTCAAAGTACATTTAG GGAAAGATTGTTAGAGCTTTACAGAAAATGTGCTGTGACCCGCGAAGACTACCCACTGGTCCTTGAGGCTGCTCACATAG ATCCATACTTGGGAGAAAACAGCAACCATCTACAAAACGGGCTCATTTTAAGAAGCGATGTTCACAAACTATTCGACGCG AACCTTCTGACTATAGATACTAACTACCGTGTCAGATTGAGCAATATTTTGACGGGAACCAGCTACGAAAGATTTGAAAA CAAACCGATTGAATTACCTAAAAACAAAAACTACTACCCATCTGAAGACGCTTTAAAACGAAGAATGGAAAAACTAATTG TACTTAATTACTAA
Upstream 100 bases:
>100_bases TAAGTAGTGACAGGATACCCTTTGAGTGAAGATAACCCACTTTCTCAAGACAAAACATCGAACCAAATTAACTTAGATTG AGATATACAGATAACAAATT
Downstream 100 bases:
>100_bases TTGGTAATTGGGAAAAAACAAAGAGTGACTGACAGTTTTTCCGCCCAATTATTGGATAAGCTGTATAAAGTCAATAGGTT TTTGACCCGGGAGGGCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: Restriction Endonuclease-Like Protein; TPR Repeat-Containing Protein; Restriction Endonuclease-Like
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MDIIALTDVSWFKFLRKKNREKDFKLINFWTPTGWEPKKINPGDMFYLFLKSPYRKVGGYARYVYSFQLTVRDAWNKFGQ ANGAPNINIMLEQLSAIRGTRIDENTIIGCIMLQDPVFLQDDEFFDSREIGVEIKQAMQKFKYIKGAEIIRPEYTIDKIG NYVLNEKVTVEYTLSAHKKRIGQSTFRERLLELYRKCAVTREDYPLVLEAAHIDPYLGENSNHLQNGLILRSDVHKLFDA NLLTIDTNYRVRLSNILTGTSYERFENKPIELPKNKNYYPSEDALKRRMEKLIVLNY
Sequences:
>Translated_297_residues MDIIALTDVSWFKFLRKKNREKDFKLINFWTPTGWEPKKINPGDMFYLFLKSPYRKVGGYARYVYSFQLTVRDAWNKFGQ ANGAPNINIMLEQLSAIRGTRIDENTIIGCIMLQDPVFLQDDEFFDSREIGVEIKQAMQKFKYIKGAEIIRPEYTIDKIG NYVLNEKVTVEYTLSAHKKRIGQSTFRERLLELYRKCAVTREDYPLVLEAAHIDPYLGENSNHLQNGLILRSDVHKLFDA NLLTIDTNYRVRLSNILTGTSYERFENKPIELPKNKNYYPSEDALKRRMEKLIVLNY >Mature_297_residues MDIIALTDVSWFKFLRKKNREKDFKLINFWTPTGWEPKKINPGDMFYLFLKSPYRKVGGYARYVYSFQLTVRDAWNKFGQ ANGAPNINIMLEQLSAIRGTRIDENTIIGCIMLQDPVFLQDDEFFDSREIGVEIKQAMQKFKYIKGAEIIRPEYTIDKIG NYVLNEKVTVEYTLSAHKKRIGQSTFRERLLELYRKCAVTREDYPLVLEAAHIDPYLGENSNHLQNGLILRSDVHKLFDA NLLTIDTNYRVRLSNILTGTSYERFENKPIELPKNKNYYPSEDALKRRMEKLIVLNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34908; Mature: 34908
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIIALTDVSWFKFLRKKNREKDFKLINFWTPTGWEPKKINPGDMFYLFLKSPYRKVGGY CCEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHCCC ARYVYSFQLTVRDAWNKFGQANGAPNINIMLEQLSAIRGTRIDENTIIGCIMLQDPVFLQ EEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEC DDEFFDSREIGVEIKQAMQKFKYIKGAEIIRPEYTIDKIGNYVLNEKVTVEYTLSAHKKR CCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCHHHHCCEEEEEEEHHHHHHH IGQSTFRERLLELYRKCAVTREDYPLVLEAAHIDPYLGENSNHLQNGLILRSDVHKLFDA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHCCEEEHHHHHHHHCC NLLTIDTNYRVRLSNILTGTSYERFENKPIELPKNKNYYPSEDALKRRMEKLIVLNY CEEEEECCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECC >Mature Secondary Structure MDIIALTDVSWFKFLRKKNREKDFKLINFWTPTGWEPKKINPGDMFYLFLKSPYRKVGGY CCEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHCCC ARYVYSFQLTVRDAWNKFGQANGAPNINIMLEQLSAIRGTRIDENTIIGCIMLQDPVFLQ EEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEC DDEFFDSREIGVEIKQAMQKFKYIKGAEIIRPEYTIDKIGNYVLNEKVTVEYTLSAHKKR CCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCHHHHCCEEEEEEEHHHHHHH IGQSTFRERLLELYRKCAVTREDYPLVLEAAHIDPYLGENSNHLQNGLILRSDVHKLFDA HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHCCEEEHHHHHHHHCC NLLTIDTNYRVRLSNILTGTSYERFENKPIELPKNKNYYPSEDALKRRMEKLIVLNY CEEEEECCCEEEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA