| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238925652
Identifier: 238925652
GI number: 238925652
Start: 3142535
End: 3142891
Strand: Reverse
Name: 238925652
Synonym: EUBREC_3309
Alternate gene names: NA
Gene position: 3142891-3142535 (Counterclockwise)
Preceding gene: 238925653
Following gene: 238925651
Centisome position: 91.11
GC content: 35.85
Gene sequence:
>357_bases ATGACCTTAGGAAAGTATGAACCAACTATAAGGGCAGATGGTACTAAAGATTTTTCAATTCCAGGTCCAGGTGCATATAC TGTTAAGGCAGGAGATACAACATATTTTAGTCTGGGAACGGAGTGGGATAAAATTACGGATACATATGGTTTAGACGTAG CAGGTCAAAATATGTTTGACTATTTTAACAAACCTGCATTAGATGATGCCATAAACGCAGGTAAAGAGATACGATTTTCA CATAATCCAGAGGCATATGGTGAATGCGCATTGAAATGGGAATGGGATTATTTGCAAGAAAAACATGGGTATTTTGCATT AGAAAAAAAAGGAGATTTTTGGTATGCAACAAAATAA
Upstream 100 bases:
>100_bases TGGTTTAAATATAATAGATGGGAAAGTTGATGGGAAAATACCACTAGCAGAGTATAAAAAATATCGAGTTGATAGTGTGC ATAATATAGATTCGGATACG
Downstream 100 bases:
>100_bases TTTTAATGATATTAGAATCGATACGGGTAAAAAAATAAAAAAAATATTTGGTAATAAAATTAGAGGTATAGAATATTATG ATGTGGTGGAAGAAGCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTLGKYEPTIRADGTKDFSIPGPGAYTVKAGDTTYFSLGTEWDKITDTYGLDVAGQNMFDYFNKPALDDAINAGKEIRFS HNPEAYGECALKWEWDYLQEKHGYFALEKKGDFWYATK
Sequences:
>Translated_118_residues MTLGKYEPTIRADGTKDFSIPGPGAYTVKAGDTTYFSLGTEWDKITDTYGLDVAGQNMFDYFNKPALDDAINAGKEIRFS HNPEAYGECALKWEWDYLQEKHGYFALEKKGDFWYATK >Mature_117_residues TLGKYEPTIRADGTKDFSIPGPGAYTVKAGDTTYFSLGTEWDKITDTYGLDVAGQNMFDYFNKPALDDAINAGKEIRFSH NPEAYGECALKWEWDYLQEKHGYFALEKKGDFWYATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13416; Mature: 13285
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGKYEPTIRADGTKDFSIPGPGAYTVKAGDTTYFSLGTEWDKITDTYGLDVAGQNMFD CCCCCCCCEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHH YFNKPALDDAINAGKEIRFSHNPEAYGECALKWEWDYLQEKHGYFALEKKGDFWYATK HCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEEHHHHHCCCCEEEEEECCCEEEECC >Mature Secondary Structure TLGKYEPTIRADGTKDFSIPGPGAYTVKAGDTTYFSLGTEWDKITDTYGLDVAGQNMFD CCCCCCCEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHH YFNKPALDDAINAGKEIRFSHNPEAYGECALKWEWDYLQEKHGYFALEKKGDFWYATK HCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEEHHHHHCCCCEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA