| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238925641
Identifier: 238925641
GI number: 238925641
Start: 3134166
End: 3136040
Strand: Reverse
Name: 238925641
Synonym: EUBREC_3298
Alternate gene names: NA
Gene position: 3136040-3134166 (Counterclockwise)
Preceding gene: 238925642
Following gene: 238925640
Centisome position: 90.91
GC content: 41.49
Gene sequence:
>1875_bases GTGGCTTATGAGTCTGTTGACAGCGGCAGTGCATTATTGACAGATGAGTCACAGAAGGTGACAGTACAGCTTCAGAATGG AACAGCAGTTATTCCGCAGGGTGCAGATATTGAGACTGCTAAAGCGGCAATAGCAAAAGCGCTTGTTGTAAACGCAGACG AAGTTGATGTAAAAAACCTTGATTGGGAGTACGAGTGCGAGGGCAAGGATAAGACTAAATTACAGAAAAATACAGCATTC GGAAGCTTAGAGGGCTTTACGAGCACAACAACGAAAAAAATACTTTGGAATACTGTAACAACAGAATATAATCATCCAGC ATTTTTAGAAAACGGTGAAGGAGATTTCAAATTCAGACTTAAGGGAAGCGATGAGGTTGTTACACTCCACAGAGCTTACA AGTATGAATCATCATTTGTTTTAAAGGATGCTCCGTATGAAGTGAGCATGGCTTTTAACGCGGATCAGTCATATGATTTT GATGCTACAGCAAGAGCAATTTATGATGCTGTGATAGCAAAGACAAATCCGGCAGGGCTTACATATGATGATGTGGCAAT GGAGTACAATGCCGGAACAGATATAATACCAAACTGGCAGCCACTTAATTCTACAAACTGGACTGCAGCATTTAAAAAAT TTGGTCCGGGAGAGTGGACTATCCGCATAAAGTGGGATGGAAATAAGAACTATAAAGGTACACAGACACAGGTAAATGTG ACTACAGCCGATAACCGTATAGCAGCGGCCGTTGTATGCAGGGAGGGAGTATCTTTTTCATACAATATGGACACTGCCGT TATGAAACAGTCAATATTTGATCAGGTAATTGATTGGGACAACAGTACATTGCCTGCAAAGGATACGTTAAGTGTTGATG ATTTTACAATGGAATACTATGGTGTTGATGATGTAGCCGGAGTTGAGGGAGTCACCAGGCAGTGGGCTCCGATAGAAGGC GGAAAGGTTAATTTACTTACTTATCTGCAGATGGGTGCAGGAGAGCAGCAAATCCGTATAACATATAAAGGCAATGCCGA GTATCGTCCATCAGCATCAGCAGAGACTAGTGTGACCGTTAATAAGGCAAAGGTAAATGTTAAAGTAAAGTCAACAAACA TTTATGCCGGAGATGCACTACCACAGGATTTTGTTACAACAAATCCTTCAGACAGGTTTGATGTATATACAATCTATGCC GGTCTTACAAGCAATGTAAATGCAGGCATTTATCTTCAGATGCCTGAGAAGTATACAAACAGCACAGTACTTAAGCTTAT AGATCCGGTTGTTTCAAAGCTATATGGAAAGTCCTTTACACAGATGATGCAGGACGGTATGACAGTCGGAGAGCTTAGAA AACTTTTCAGCACACAGGAGCTGCTTGACACGTTGAAGAAGCTTCATATAGATATGGGTACAGTTGGACAGATTCTTGAG ATAATAAATAAGCTTCCTTCTGTTGCAGACACAGTGAGAGTGTCATTTGGTACTCCAAACCGTGCCGGTCTTTATACGGT GACAGCGGTTACCGATAACAAGAATTATGAGACAGGTGTTGGAGTTGGTGCTTTACTTGTCAAGATGCATTCAAAAGGAA CTAAGCTTAGTTGGAATCAGAGCTTTACAAATGGGAAGCTTAAAGCCTCAGATGTAGCATCCTTTGATTTTGGAGCAACG CTATCATATGATGGTGATGTCTCAATCAGCCAGAGCAATGTGCATTATCTATACAGTGGCTTTACAAGCAAGTGGAAGCC ATATTCAAGCACAAAGGCTCCTACAGAGCCGGGCAGATATGTAGTCACAGTAGTTACAATTGGTGGCAATTATCAGGCAG CTCCTATTACTAGAAGCTTTCAGATCGTAAAATAA
Upstream 100 bases:
>100_bases ACAGACACTTTATTGTGTGACAAGCTATCTGAGTGTGCAGTAATATAAGTAAATAAAAGCGATAGAACCACTTGCAACGC AGGTCATATTTGCAGCAGAT
Downstream 100 bases:
>100_bases CTAAAATCCGCTATACTTTAAAACAAAGTATAGCGGATTTTTTTGATAAATTTATGGAATCTATTTTTCAAGAATACCTG GAAAGGAGCATTAAAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MAYESVDSGSALLTDESQKVTVQLQNGTAVIPQGADIETAKAAIAKALVVNADEVDVKNLDWEYECEGKDKTKLQKNTAF GSLEGFTSTTTKKILWNTVTTEYNHPAFLENGEGDFKFRLKGSDEVVTLHRAYKYESSFVLKDAPYEVSMAFNADQSYDF DATARAIYDAVIAKTNPAGLTYDDVAMEYNAGTDIIPNWQPLNSTNWTAAFKKFGPGEWTIRIKWDGNKNYKGTQTQVNV TTADNRIAAAVVCREGVSFSYNMDTAVMKQSIFDQVIDWDNSTLPAKDTLSVDDFTMEYYGVDDVAGVEGVTRQWAPIEG GKVNLLTYLQMGAGEQQIRITYKGNAEYRPSASAETSVTVNKAKVNVKVKSTNIYAGDALPQDFVTTNPSDRFDVYTIYA GLTSNVNAGIYLQMPEKYTNSTVLKLIDPVVSKLYGKSFTQMMQDGMTVGELRKLFSTQELLDTLKKLHIDMGTVGQILE IINKLPSVADTVRVSFGTPNRAGLYTVTAVTDNKNYETGVGVGALLVKMHSKGTKLSWNQSFTNGKLKASDVASFDFGAT LSYDGDVSISQSNVHYLYSGFTSKWKPYSSTKAPTEPGRYVVTVVTIGGNYQAAPITRSFQIVK
Sequences:
>Translated_624_residues MAYESVDSGSALLTDESQKVTVQLQNGTAVIPQGADIETAKAAIAKALVVNADEVDVKNLDWEYECEGKDKTKLQKNTAF GSLEGFTSTTTKKILWNTVTTEYNHPAFLENGEGDFKFRLKGSDEVVTLHRAYKYESSFVLKDAPYEVSMAFNADQSYDF DATARAIYDAVIAKTNPAGLTYDDVAMEYNAGTDIIPNWQPLNSTNWTAAFKKFGPGEWTIRIKWDGNKNYKGTQTQVNV TTADNRIAAAVVCREGVSFSYNMDTAVMKQSIFDQVIDWDNSTLPAKDTLSVDDFTMEYYGVDDVAGVEGVTRQWAPIEG GKVNLLTYLQMGAGEQQIRITYKGNAEYRPSASAETSVTVNKAKVNVKVKSTNIYAGDALPQDFVTTNPSDRFDVYTIYA GLTSNVNAGIYLQMPEKYTNSTVLKLIDPVVSKLYGKSFTQMMQDGMTVGELRKLFSTQELLDTLKKLHIDMGTVGQILE IINKLPSVADTVRVSFGTPNRAGLYTVTAVTDNKNYETGVGVGALLVKMHSKGTKLSWNQSFTNGKLKASDVASFDFGAT LSYDGDVSISQSNVHYLYSGFTSKWKPYSSTKAPTEPGRYVVTVVTIGGNYQAAPITRSFQIVK >Mature_623_residues AYESVDSGSALLTDESQKVTVQLQNGTAVIPQGADIETAKAAIAKALVVNADEVDVKNLDWEYECEGKDKTKLQKNTAFG SLEGFTSTTTKKILWNTVTTEYNHPAFLENGEGDFKFRLKGSDEVVTLHRAYKYESSFVLKDAPYEVSMAFNADQSYDFD ATARAIYDAVIAKTNPAGLTYDDVAMEYNAGTDIIPNWQPLNSTNWTAAFKKFGPGEWTIRIKWDGNKNYKGTQTQVNVT TADNRIAAAVVCREGVSFSYNMDTAVMKQSIFDQVIDWDNSTLPAKDTLSVDDFTMEYYGVDDVAGVEGVTRQWAPIEGG KVNLLTYLQMGAGEQQIRITYKGNAEYRPSASAETSVTVNKAKVNVKVKSTNIYAGDALPQDFVTTNPSDRFDVYTIYAG LTSNVNAGIYLQMPEKYTNSTVLKLIDPVVSKLYGKSFTQMMQDGMTVGELRKLFSTQELLDTLKKLHIDMGTVGQILEI INKLPSVADTVRVSFGTPNRAGLYTVTAVTDNKNYETGVGVGALLVKMHSKGTKLSWNQSFTNGKLKASDVASFDFGATL SYDGDVSISQSNVHYLYSGFTSKWKPYSSTKAPTEPGRYVVTVVTIGGNYQAAPITRSFQIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68584; Mature: 68452
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYESVDSGSALLTDESQKVTVQLQNGTAVIPQGADIETAKAAIAKALVVNADEVDVKNL CCCCCCCCCCEEEECCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHEEECCCCCCEECC DWEYECEGKDKTKLQKNTAFGSLEGFTSTTTKKILWNTVTTEYNHPAFLENGEGDFKFRL CEEEEECCCCCHHEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCEEEEE KGSDEVVTLHRAYKYESSFVLKDAPYEVSMAFNADQSYDFDATARAIYDAVIAKTNPAGL CCCCCEEEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC TYDDVAMEYNAGTDIIPNWQPLNSTNWTAAFKKFGPGEWTIRIKWDGNKNYKGTQTQVNV EEHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEE TTADNRIAAAVVCREGVSFSYNMDTAVMKQSIFDQVIDWDNSTLPAKDTLSVDDFTMEYY EECCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE GVDDVAGVEGVTRQWAPIEGGKVNLLTYLQMGAGEQQIRITYKGNAEYRPSASAETSVTV CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEE NKAKVNVKVKSTNIYAGDALPQDFVTTNPSDRFDVYTIYAGLTSNVNAGIYLQMPEKYTN EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCC STVLKLIDPVVSKLYGKSFTQMMQDGMTVGELRKLFSTQELLDTLKKLHIDMGTVGQILE CHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IINKLPSVADTVRVSFGTPNRAGLYTVTAVTDNKNYETGVGVGALLVKMHSKGTKLSWNQ HHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECCC SFTNGKLKASDVASFDFGATLSYDGDVSISQSNVHYLYSGFTSKWKPYSSTKAPTEPGRY CCCCCEEEECCCCCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCE VVTVVTIGGNYQAAPITRSFQIVK EEEEEEECCCEEECCCCCCEEEEC >Mature Secondary Structure AYESVDSGSALLTDESQKVTVQLQNGTAVIPQGADIETAKAAIAKALVVNADEVDVKNL CCCCCCCCCEEEECCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHEEECCCCCCEECC DWEYECEGKDKTKLQKNTAFGSLEGFTSTTTKKILWNTVTTEYNHPAFLENGEGDFKFRL CEEEEECCCCCHHEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCEEEEE KGSDEVVTLHRAYKYESSFVLKDAPYEVSMAFNADQSYDFDATARAIYDAVIAKTNPAGL CCCCCEEEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC TYDDVAMEYNAGTDIIPNWQPLNSTNWTAAFKKFGPGEWTIRIKWDGNKNYKGTQTQVNV EEHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEE TTADNRIAAAVVCREGVSFSYNMDTAVMKQSIFDQVIDWDNSTLPAKDTLSVDDFTMEYY EECCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE GVDDVAGVEGVTRQWAPIEGGKVNLLTYLQMGAGEQQIRITYKGNAEYRPSASAETSVTV CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEE NKAKVNVKVKSTNIYAGDALPQDFVTTNPSDRFDVYTIYAGLTSNVNAGIYLQMPEKYTN EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCC STVLKLIDPVVSKLYGKSFTQMMQDGMTVGELRKLFSTQELLDTLKKLHIDMGTVGQILE CHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IINKLPSVADTVRVSFGTPNRAGLYTVTAVTDNKNYETGVGVGALLVKMHSKGTKLSWNQ HHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECCC SFTNGKLKASDVASFDFGATLSYDGDVSISQSNVHYLYSGFTSKWKPYSSTKAPTEPGRY CCCCCEEEECCCCCCCCCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCE VVTVVTIGGNYQAAPITRSFQIVK EEEEEEECCCEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA