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The map label for this gene is yjjU [H]

Identifier: 238925624

GI number: 238925624

Start: 3114817

End: 3115680

Strand: Reverse

Name: yjjU [H]

Synonym: EUBREC_3280

Alternate gene names: 238925624

Gene position: 3115680-3114817 (Counterclockwise)

Preceding gene: 238925625

Following gene: 238925623

Centisome position: 90.32

GC content: 44.91

Gene sequence:

>864_bases
ATGGAGGCAGAAATGAGTGATGAAAGATGCGCCCTCGTGCTTGAGGGTGGAGCCATGAGAGGTATGTATACAGCCGGAGT
ACTCGACTGTTTTATGGACCATGATATTAGCTTTGATGCTGTTATCGGTGTTTCGGCGGGAGCACTTTTTGGAGTGAATC
TGCTGTCAAAGCAGCGCGGCAGGGTTATACGATACAATAAGAGGTTTAACAGTGACAAAAATTATATGGGTATCAGACCG
CTTCTTCGGGAGAAAAACATAGTGAGCACGAAATATGCCTATGATACAGTACCAAGAGAGCTTGACCCGTTTGATGATGA
GGAATATAAGAAGTCGGATATCCCATTTTATGCGGTTGTGACGAATATCAGGACAGGTAAGCCTGAATATGTGCAGATAA
AGAGTGTCTTTGACCAGATGGATGTGCTCAGGGCATCGGGCTCCATGCCTGTAGTGTCGAAGCCTGTGAAGCTGGGGAAT
GAGTGGTATCTGGATGGCGCGGTGACGGACAGTATTCCATATGAGCATATGCTTGATATGGGATATGACAGAGTGGTTGT
CGTGCTGACAAAGCCGGCAGACTATATAAAAAAACCTATGCCAAGGTTATTTACATCGGTATACAAAAAGCGTTTTCCGA
GGTTTTATGAGGCATTTTCAAACAGGCATATCATGTACAATTATCAGCTTGAGCATCTTAAGGAGCTTGAAAAGCAGGGC
ATTGCCGAGGTGTTAAGGCCGTCGGAGCACATTAAAATAAGCAAGGTAGAAAAGGATCCTAATAAGCTTGAGAGCCTGTA
TCAGCTTGGATTACGTGATGCCAAGAGGCTTTTAGCCGATAAGCAAGGGATGGAGAAGCAGTAA

Upstream 100 bases:

>100_bases
AGGGAGCACAAGCTTGAGAGAAAACAGCGCAGAAGGAGAGACAATCTGAAGTTCAGCGGTCGACATAAATATTAATACAT
TTTTTATTATGACATTATAA

Downstream 100 bases:

>100_bases
TGAATATACAACAGGTACAGACTATCATAGCTGATGCCATGGAAAAGTACAACGGAATAGTGAAAAAAGAAGAGCTTACA
AGGCTTGGTATAGACTACAG

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MEAEMSDERCALVLEGGAMRGMYTAGVLDCFMDHDISFDAVIGVSAGALFGVNLLSKQRGRVIRYNKRFNSDKNYMGIRP
LLREKNIVSTKYAYDTVPRELDPFDDEEYKKSDIPFYAVVTNIRTGKPEYVQIKSVFDQMDVLRASGSMPVVSKPVKLGN
EWYLDGAVTDSIPYEHMLDMGYDRVVVVLTKPADYIKKPMPRLFTSVYKKRFPRFYEAFSNRHIMYNYQLEHLKELEKQG
IAEVLRPSEHIKISKVEKDPNKLESLYQLGLRDAKRLLADKQGMEKQ

Sequences:

>Translated_287_residues
MEAEMSDERCALVLEGGAMRGMYTAGVLDCFMDHDISFDAVIGVSAGALFGVNLLSKQRGRVIRYNKRFNSDKNYMGIRP
LLREKNIVSTKYAYDTVPRELDPFDDEEYKKSDIPFYAVVTNIRTGKPEYVQIKSVFDQMDVLRASGSMPVVSKPVKLGN
EWYLDGAVTDSIPYEHMLDMGYDRVVVVLTKPADYIKKPMPRLFTSVYKKRFPRFYEAFSNRHIMYNYQLEHLKELEKQG
IAEVLRPSEHIKISKVEKDPNKLESLYQLGLRDAKRLLADKQGMEKQ
>Mature_287_residues
MEAEMSDERCALVLEGGAMRGMYTAGVLDCFMDHDISFDAVIGVSAGALFGVNLLSKQRGRVIRYNKRFNSDKNYMGIRP
LLREKNIVSTKYAYDTVPRELDPFDDEEYKKSDIPFYAVVTNIRTGKPEYVQIKSVFDQMDVLRASGSMPVVSKPVKLGN
EWYLDGAVTDSIPYEHMLDMGYDRVVVVLTKPADYIKKPMPRLFTSVYKKRFPRFYEAFSNRHIMYNYQLEHLKELEKQG
IAEVLRPSEHIKISKVEKDPNKLESLYQLGLRDAKRLLADKQGMEKQ

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=195, Percent_Identity=28.7179487179487, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33081; Mature: 33081

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAEMSDERCALVLEGGAMRGMYTAGVLDCFMDHDISFDAVIGVSAGALFGVNLLSKQRG
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
RVIRYNKRFNSDKNYMGIRPLLREKNIVSTKYAYDTVPRELDPFDDEEYKKSDIPFYAVV
CEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEE
TNIRTGKPEYVQIKSVFDQMDVLRASGSMPVVSKPVKLGNEWYLDGAVTDSIPYEHMLDM
EECCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHC
GYDRVVVVLTKPADYIKKPMPRLFTSVYKKRFPRFYEAFSNRHIMYNYQLEHLKELEKQG
CCCEEEEEEECCHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCEEEEECCHHHHHHHHHHH
IAEVLRPSEHIKISKVEKDPNKLESLYQLGLRDAKRLLADKQGMEKQ
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEAEMSDERCALVLEGGAMRGMYTAGVLDCFMDHDISFDAVIGVSAGALFGVNLLSKQRG
CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
RVIRYNKRFNSDKNYMGIRPLLREKNIVSTKYAYDTVPRELDPFDDEEYKKSDIPFYAVV
CEEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEE
TNIRTGKPEYVQIKSVFDQMDVLRASGSMPVVSKPVKLGNEWYLDGAVTDSIPYEHMLDM
EECCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHHC
GYDRVVVVLTKPADYIKKPMPRLFTSVYKKRFPRFYEAFSNRHIMYNYQLEHLKELEKQG
CCCEEEEEEECCHHHHHCCHHHHHHHHHHHHCHHHHHHHCCCEEEEECCHHHHHHHHHHH
IAEVLRPSEHIKISKVEKDPNKLESLYQLGLRDAKRLLADKQGMEKQ
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]