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The map label for this gene is yaaJ [C]

Identifier: 238925540

GI number: 238925540

Start: 3042204

End: 3043643

Strand: Reverse

Name: yaaJ [C]

Synonym: EUBREC_3196

Alternate gene names: 238925540

Gene position: 3043643-3042204 (Counterclockwise)

Preceding gene: 238925541

Following gene: 238925539

Centisome position: 88.23

GC content: 46.74

Gene sequence:

>1440_bases
ATGTTATCAGTAATAGAAAAAGTCAATGACGTGGTCAACAATTTTATCTGGGGCGTGCCTGCGATGATATGTATCATAGG
TGTCGGGCTGCTTTTGAGCTTCAGAACGGGATTTATTCAGATTAGAAAGTTTCCGTATGCGATGAAGGTTACGCTTGGCA
GGATGCTCAAAAAACGTGAGGCATCCGACGGAGCGCTCACACCGTTTCAGGCAGTGTGTACGGCACTTGCGGCGACGGTC
GGTACAGGAAATGTGGCAGGAGTTGCGGGAGCCATCGCAATAGGCGGACCGGGAGCGGTGTTCTGGATGTGGATTTCAGC
ACTTCTGGGCATGTGCACAAAGTTCTCGGAGGTCACACTTGCTGTACATTTTCACGAGAGAAATGCAAACGGCGACCTGG
TAGGCGGCCCTATGTACTATATTAAAAACGGTCTTAAAAAGCACTGGCACTGGCTGGCATATCTGTTCTCAGCGTTTGGC
GTGCTCACCGTGTTCGGTACAGGAAACGCTACACAGGTAAACACCATAATCACAGCGATTGATTCAGCTTTATATAATTA
CGATATAATTTCAAAAGAATCGGCATCTACGCTCAATCTCATATTAGGAATAGTGCTAGCCGCTCTTATTGCGCTTATTC
TGCTTGGAGGAATCAAGCGTATAGGCCAGGTTACTGAAAAGCTTGTGCCATTTATGGCAGTGATGTATATTCTGCTGGCA
CTTGGAGTAGTAATCATCAACTTTAAAGCTATACCGGGTGTATTCGGAGCCATAATAGAGGGCGCGTTCAATCCGTCAGC
AGTGACAGGCGGAGCAGTAGGAAGCTTTTTTATGAGCATGAAAAAGGGAGTTTCCAGAGGAATTTTTTCAAACGAAGCAG
GTCTTGGAACAGGCTCTATCGCACATGCCTGTGCAGACACCAAAAAGCCTGTAAAGCAGGGCTTCTTTGGCATATTTGAG
GTGTTTGTGGACACTATCGTGATATGTACACTCACAGCGCTTGTCATACTTTGCAGCGGAGTTTCTGTGGGCTATGGAGA
AGCAGCAGGCGCAGAGCTTACCATCAGCGGATTTACATCCACCTACGGCGGCTGGGTATCAATCTTTACAGCGGTTGCCA
TGTGCTGTTTTGCATTTTCAACCATCATAGGCTGGGGACTTTACGGAACCAGATGCATAGAGTTCCTATTCGGAACTAAG
GCAAATAAGCTGTTCATGGTAGTATATTCGCTTGTTGCGATAGTCGGTGCGACAATGAACCTCGGACTGATGTGGAGCAT
AGCGGAGACCTTCAATGGCCTTATGGTCATACCAAACCTTATCGCGGTATTTTTGCTTTCGGGTGTAGTTGTAAAGCTGG
TGAAGGAATATTTAGCAGGAGAGGGAGCTGCATCTACCTTGAAGAATAGCCGGGAAGAGGCAAAAAGAACATTTTTATAG

Upstream 100 bases:

>100_bases
TATAAAGAAAAACTTCAAAAAAATGAAATTAAATATATAAAAAATTGTACAAACCGTGTTATACTTTATACGTTACACTA
AATTCAGGTAGGAGAAAAAG

Downstream 100 bases:

>100_bases
AATTTGAAGGTATAAGTCATTATGGAAAATAAAATTGATTCATCGTTTGAAAGAAGCCTGCTATTCAGAGTAGTTGCAAT
TATAGTGTGTATAATTATTG

Product: putative sodium/alanine symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MLSVIEKVNDVVNNFIWGVPAMICIIGVGLLLSFRTGFIQIRKFPYAMKVTLGRMLKKREASDGALTPFQAVCTALAATV
GTGNVAGVAGAIAIGGPGAVFWMWISALLGMCTKFSEVTLAVHFHERNANGDLVGGPMYYIKNGLKKHWHWLAYLFSAFG
VLTVFGTGNATQVNTIITAIDSALYNYDIISKESASTLNLILGIVLAALIALILLGGIKRIGQVTEKLVPFMAVMYILLA
LGVVIINFKAIPGVFGAIIEGAFNPSAVTGGAVGSFFMSMKKGVSRGIFSNEAGLGTGSIAHACADTKKPVKQGFFGIFE
VFVDTIVICTLTALVILCSGVSVGYGEAAGAELTISGFTSTYGGWVSIFTAVAMCCFAFSTIIGWGLYGTRCIEFLFGTK
ANKLFMVVYSLVAIVGATMNLGLMWSIAETFNGLMVIPNLIAVFLLSGVVVKLVKEYLAGEGAASTLKNSREEAKRTFL

Sequences:

>Translated_479_residues
MLSVIEKVNDVVNNFIWGVPAMICIIGVGLLLSFRTGFIQIRKFPYAMKVTLGRMLKKREASDGALTPFQAVCTALAATV
GTGNVAGVAGAIAIGGPGAVFWMWISALLGMCTKFSEVTLAVHFHERNANGDLVGGPMYYIKNGLKKHWHWLAYLFSAFG
VLTVFGTGNATQVNTIITAIDSALYNYDIISKESASTLNLILGIVLAALIALILLGGIKRIGQVTEKLVPFMAVMYILLA
LGVVIINFKAIPGVFGAIIEGAFNPSAVTGGAVGSFFMSMKKGVSRGIFSNEAGLGTGSIAHACADTKKPVKQGFFGIFE
VFVDTIVICTLTALVILCSGVSVGYGEAAGAELTISGFTSTYGGWVSIFTAVAMCCFAFSTIIGWGLYGTRCIEFLFGTK
ANKLFMVVYSLVAIVGATMNLGLMWSIAETFNGLMVIPNLIAVFLLSGVVVKLVKEYLAGEGAASTLKNSREEAKRTFL
>Mature_479_residues
MLSVIEKVNDVVNNFIWGVPAMICIIGVGLLLSFRTGFIQIRKFPYAMKVTLGRMLKKREASDGALTPFQAVCTALAATV
GTGNVAGVAGAIAIGGPGAVFWMWISALLGMCTKFSEVTLAVHFHERNANGDLVGGPMYYIKNGLKKHWHWLAYLFSAFG
VLTVFGTGNATQVNTIITAIDSALYNYDIISKESASTLNLILGIVLAALIALILLGGIKRIGQVTEKLVPFMAVMYILLA
LGVVIINFKAIPGVFGAIIEGAFNPSAVTGGAVGSFFMSMKKGVSRGIFSNEAGLGTGSIAHACADTKKPVKQGFFGIFE
VFVDTIVICTLTALVILCSGVSVGYGEAAGAELTISGFTSTYGGWVSIFTAVAMCCFAFSTIIGWGLYGTRCIEFLFGTK
ANKLFMVVYSLVAIVGATMNLGLMWSIAETFNGLMVIPNLIAVFLLSGVVVKLVKEYLAGEGAASTLKNSREEAKRTFL

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=455, Percent_Identity=33.6263736263736, Blast_Score=238, Evalue=6e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50742; Mature: 50742

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVIEKVNDVVNNFIWGVPAMICIIGVGLLLSFRTGFIQIRKFPYAMKVTLGRMLKKRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ASDGALTPFQAVCTALAATVGTGNVAGVAGAIAIGGPGAVFWMWISALLGMCTKFSEVTL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHEEE
AVHFHERNANGDLVGGPMYYIKNGLKKHWHWLAYLFSAFGVLTVFGTGNATQVNTIITAI
EEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHH
DSALYNYDIISKESASTLNLILGIVLAALIALILLGGIKRIGQVTEKLVPFMAVMYILLA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVVIINFKAIPGVFGAIIEGAFNPSAVTGGAVGSFFMSMKKGVSRGIFSNEAGLGTGSI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AHACADTKKPVKQGFFGIFEVFVDTIVICTLTALVILCSGVSVGYGEAAGAELTISGFTS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHH
TYGGWVSIFTAVAMCCFAFSTIIGWGLYGTRCIEFLFGTKANKLFMVVYSLVAIVGATMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LGLMWSIAETFNGLMVIPNLIAVFLLSGVVVKLVKEYLAGEGAASTLKNSREEAKRTFL
HHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSVIEKVNDVVNNFIWGVPAMICIIGVGLLLSFRTGFIQIRKFPYAMKVTLGRMLKKRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ASDGALTPFQAVCTALAATVGTGNVAGVAGAIAIGGPGAVFWMWISALLGMCTKFSEVTL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHEEE
AVHFHERNANGDLVGGPMYYIKNGLKKHWHWLAYLFSAFGVLTVFGTGNATQVNTIITAI
EEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHH
DSALYNYDIISKESASTLNLILGIVLAALIALILLGGIKRIGQVTEKLVPFMAVMYILLA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVVIINFKAIPGVFGAIIEGAFNPSAVTGGAVGSFFMSMKKGVSRGIFSNEAGLGTGSI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AHACADTKKPVKQGFFGIFEVFVDTIVICTLTALVILCSGVSVGYGEAAGAELTISGFTS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHH
TYGGWVSIFTAVAMCCFAFSTIIGWGLYGTRCIEFLFGTKANKLFMVVYSLVAIVGATMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LGLMWSIAETFNGLMVIPNLIAVFLLSGVVVKLVKEYLAGEGAASTLKNSREEAKRTFL
HHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]