| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925537
Identifier: 238925537
GI number: 238925537
Start: 3039958
End: 3040926
Strand: Reverse
Name: 238925537
Synonym: EUBREC_3193
Alternate gene names: NA
Gene position: 3040926-3039958 (Counterclockwise)
Preceding gene: 238925538
Following gene: 238925536
Centisome position: 88.15
GC content: 40.97
Gene sequence:
>969_bases TTGGGTACAAAGGACTCGAAGGCAAAGGAGTATTTGTCGGACAATACGAGGTTTAGTGAAATCTGTAATTATGTATTGTT TGACGGAGAGAAGGTTATCAAACCGGAGGATTTAAAGGAATGTGACACCACAGAGGTGTTATCAGTTTTCGGTATTGATA AGAAGCAGATTGTTAAGCAGAAATGGAGAGATTTGCTAAAAAGTGTTTCCGTGAAGCATACAGGGCAAATGTATGTTATC TTAATTGGAGCAGAAGCGCAGACAGACATTCATTATGCGATGCCTGTTAAAACTATGATTTATGATGCATTGAATTACGG AGAGCAGGTCAACGAGGCAAAGAAACGCCACCGGAAAAATAAGGATTACAGGTCTTCGGACGAGTTTTTGTCAGGCTTTA CACTTGATGATAAGCTGACACCGGTGATTACAATCACACTGTATCTTGGAACTACACAGTGGGATGGGCCAAGAAGCCTT GCAGAGATGATGCCACAGATGGATGAAAGAATACTCCCATTCATCAATGATTACAGGATTAATTTACTGAATCCACTGGA GATTACAGACTTTTCCAAGTTCGAGACAGGGCTCAGGCCATTGTTTGAGTTATTGAAAAATGCGTCAGATGAGGAAAAGC TGAATGATTTAATTACAAACGACGAAACCTTCACAAGGGTTGACGTTGAGACAGTAGCAGCTATCAATCTGTTTGTAGGA ACTGACATTAAGTATGATGAAAAGGAAGAGGTGGTAAATATGTGTAAGGCATGGGATGATCATAAAAAGCTTGGCATTCA GGAGGGGATACAACAAGGACTGCAACAAGGAAGATGCCTTGAAGTATATTCACTTGTTCAGGATGGTATATTAGAGCCCG AGGTGGGCGCAAAGAGAGTAAGTATGTCATTAGATGACTTCGTAGACGCAATGCAAAAAGCGGGCTACAAAATTCCTGAA TTGGTGTAG
Upstream 100 bases:
>100_bases TAAGGGATTATTGTACACATTATATACGTGGAAAGCATAAGTATACAGTATTTTTATTCGACTTCAGATTTTCCTGCTCA CGCAAGAAGAGGAGGTTAAT
Downstream 100 bases:
>100_bases TTTGATAGCTTAAAAGTATAACAGTAATTGCCCCGACCTATGTGTGTTGGGGCATGATTTTTATATGACAGGGGAAAGTA GATGTATCTTGTATCTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MGTKDSKAKEYLSDNTRFSEICNYVLFDGEKVIKPEDLKECDTTEVLSVFGIDKKQIVKQKWRDLLKSVSVKHTGQMYVI LIGAEAQTDIHYAMPVKTMIYDALNYGEQVNEAKKRHRKNKDYRSSDEFLSGFTLDDKLTPVITITLYLGTTQWDGPRSL AEMMPQMDERILPFINDYRINLLNPLEITDFSKFETGLRPLFELLKNASDEEKLNDLITNDETFTRVDVETVAAINLFVG TDIKYDEKEEVVNMCKAWDDHKKLGIQEGIQQGLQQGRCLEVYSLVQDGILEPEVGAKRVSMSLDDFVDAMQKAGYKIPE LV
Sequences:
>Translated_322_residues MGTKDSKAKEYLSDNTRFSEICNYVLFDGEKVIKPEDLKECDTTEVLSVFGIDKKQIVKQKWRDLLKSVSVKHTGQMYVI LIGAEAQTDIHYAMPVKTMIYDALNYGEQVNEAKKRHRKNKDYRSSDEFLSGFTLDDKLTPVITITLYLGTTQWDGPRSL AEMMPQMDERILPFINDYRINLLNPLEITDFSKFETGLRPLFELLKNASDEEKLNDLITNDETFTRVDVETVAAINLFVG TDIKYDEKEEVVNMCKAWDDHKKLGIQEGIQQGLQQGRCLEVYSLVQDGILEPEVGAKRVSMSLDDFVDAMQKAGYKIPE LV >Mature_321_residues GTKDSKAKEYLSDNTRFSEICNYVLFDGEKVIKPEDLKECDTTEVLSVFGIDKKQIVKQKWRDLLKSVSVKHTGQMYVIL IGAEAQTDIHYAMPVKTMIYDALNYGEQVNEAKKRHRKNKDYRSSDEFLSGFTLDDKLTPVITITLYLGTTQWDGPRSLA EMMPQMDERILPFINDYRINLLNPLEITDFSKFETGLRPLFELLKNASDEEKLNDLITNDETFTRVDVETVAAINLFVGT DIKYDEKEEVVNMCKAWDDHKKLGIQEGIQQGLQQGRCLEVYSLVQDGILEPEVGAKRVSMSLDDFVDAMQKAGYKIPEL V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36866; Mature: 36734
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKDSKAKEYLSDNTRFSEICNYVLFDGEKVIKPEDLKECDTTEVLSVFGIDKKQIVKQ CCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHH KWRDLLKSVSVKHTGQMYVILIGAEAQTDIHYAMPVKTMIYDALNYGEQVNEAKKRHRKN HHHHHHHHCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDYRSSDEFLSGFTLDDKLTPVITITLYLGTTQWDGPRSLAEMMPQMDERILPFINDYRI CCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE NLLNPLEITDFSKFETGLRPLFELLKNASDEEKLNDLITNDETFTRVDVETVAAINLFVG EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHEEC TDIKYDEKEEVVNMCKAWDDHKKLGIQEGIQQGLQQGRCLEVYSLVQDGILEPEVGAKRV CCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHH SMSLDDFVDAMQKAGYKIPELV HCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GTKDSKAKEYLSDNTRFSEICNYVLFDGEKVIKPEDLKECDTTEVLSVFGIDKKQIVKQ CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHH KWRDLLKSVSVKHTGQMYVILIGAEAQTDIHYAMPVKTMIYDALNYGEQVNEAKKRHRKN HHHHHHHHCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDYRSSDEFLSGFTLDDKLTPVITITLYLGTTQWDGPRSLAEMMPQMDERILPFINDYRI CCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE NLLNPLEITDFSKFETGLRPLFELLKNASDEEKLNDLITNDETFTRVDVETVAAINLFVG EECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHEEC TDIKYDEKEEVVNMCKAWDDHKKLGIQEGIQQGLQQGRCLEVYSLVQDGILEPEVGAKRV CCCCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHH SMSLDDFVDAMQKAGYKIPELV HCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA