| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925526
Identifier: 238925526
GI number: 238925526
Start: 3032932
End: 3033570
Strand: Reverse
Name: 238925526
Synonym: EUBREC_3182
Alternate gene names: NA
Gene position: 3033570-3032932 (Counterclockwise)
Preceding gene: 238925527
Following gene: 238925525
Centisome position: 87.94
GC content: 38.65
Gene sequence:
>639_bases ATGAAATTTCAGTCTAAAACCAAAATTGGTATTTTTATCGGAGCTGTTGTGATTTTGCTGGTTATTGGTGTGCTGTTTTT TTGCATTGCGAAACCTTCAACTTCTGACGAAATTAAGACATCATATTTGAGAGGTACTTTTTCGATTGATTATAGCGATC TGAATGCAGTTGTAGGCGATGCTGATTATGTATTCGTTGGTACGGTCGCAAGTGAAGAAGGTACTGTTTATAAAGATGCT GTTACGGTTGAAACAGACGATGGAAAGACTCGTGAAGTTTCCGGCCCATACACAAATTATACTGTGAACGTCACAAAAAA TATCAAAGGCAATTTAGTTACTGACACGGCTATCCCGATTCAAAAATCTGGCGGACTTTCGGAAGATGGCTCACAATATT TTGTTTATGAGGGTGATGAGCTTCCGGTTGTAGGAAATGAATATATCTTTTTTGCTTATGCCCAGCCGGACGGGTCATTG TTAATTTCCGGTCCTGTTTCTAACATGAGTGTATCTGACAATACAAGCGATATTGCTCCTTTTAGCGATTCAACGGAATA TAGCGACATTGTAGATGCGTATAATAATCAAGTCGATTCTGGACGGACTAGGTTTACTTCTTCTTATGAGGCAAAATAA
Upstream 100 bases:
>100_bases TTATGTATGCGTATGTAAGCTCAGTAACAAGTCTTTCTGCCAACGACAAGGCTTCCTATGACGCAAGTTATAAAAGATAT TAAAGAAGGGAGGAAGATCT
Downstream 100 bases:
>100_bases ATTAAAATTGCAGGAAATGTAAGAATGCTTTCCGATAGCTATATGATACTTATAACTTCGGATCAATGCGATCCGAAGTT ATTTTTAGGCGTTGAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Cell Surface Protein
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MKFQSKTKIGIFIGAVVILLVIGVLFFCIAKPSTSDEIKTSYLRGTFSIDYSDLNAVVGDADYVFVGTVASEEGTVYKDA VTVETDDGKTREVSGPYTNYTVNVTKNIKGNLVTDTAIPIQKSGGLSEDGSQYFVYEGDELPVVGNEYIFFAYAQPDGSL LISGPVSNMSVSDNTSDIAPFSDSTEYSDIVDAYNNQVDSGRTRFTSSYEAK
Sequences:
>Translated_212_residues MKFQSKTKIGIFIGAVVILLVIGVLFFCIAKPSTSDEIKTSYLRGTFSIDYSDLNAVVGDADYVFVGTVASEEGTVYKDA VTVETDDGKTREVSGPYTNYTVNVTKNIKGNLVTDTAIPIQKSGGLSEDGSQYFVYEGDELPVVGNEYIFFAYAQPDGSL LISGPVSNMSVSDNTSDIAPFSDSTEYSDIVDAYNNQVDSGRTRFTSSYEAK >Mature_212_residues MKFQSKTKIGIFIGAVVILLVIGVLFFCIAKPSTSDEIKTSYLRGTFSIDYSDLNAVVGDADYVFVGTVASEEGTVYKDA VTVETDDGKTREVSGPYTNYTVNVTKNIKGNLVTDTAIPIQKSGGLSEDGSQYFVYEGDELPVVGNEYIFFAYAQPDGSL LISGPVSNMSVSDNTSDIAPFSDSTEYSDIVDAYNNQVDSGRTRFTSSYEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22924; Mature: 22924
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQSKTKIGIFIGAVVILLVIGVLFFCIAKPSTSDEIKTSYLRGTFSIDYSDLNAVVGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEEEEHHHCCEEECC ADYVFVGTVASEEGTVYKDAVTVETDDGKTREVSGPYTNYTVNVTKNIKGNLVTDTAIPI CCEEEEEEEECCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEEEECCCCCEEECCCCEE QKSGGLSEDGSQYFVYEGDELPVVGNEYIFFAYAQPDGSLLISGPVSNMSVSDNTSDIAP ECCCCCCCCCCEEEEEECCCCCEECCCEEEEEEECCCCCEEEECCCCCCEECCCCCCCCC FSDSTEYSDIVDAYNNQVDSGRTRFTSSYEAK CCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKFQSKTKIGIFIGAVVILLVIGVLFFCIAKPSTSDEIKTSYLRGTFSIDYSDLNAVVGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEEEEHHHCCEEECC ADYVFVGTVASEEGTVYKDAVTVETDDGKTREVSGPYTNYTVNVTKNIKGNLVTDTAIPI CCEEEEEEEECCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEEEECCCCCEEECCCCEE QKSGGLSEDGSQYFVYEGDELPVVGNEYIFFAYAQPDGSLLISGPVSNMSVSDNTSDIAP ECCCCCCCCCCEEEEEECCCCCEECCCEEEEEEECCCCCEEEECCCCCCEECCCCCCCCC FSDSTEYSDIVDAYNNQVDSGRTRFTSSYEAK CCCCCCHHHHHHHHCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA