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The map label for this gene is yqeB [H]

Identifier: 238925513

GI number: 238925513

Start: 3019985

End: 3020929

Strand: Reverse

Name: yqeB [H]

Synonym: EUBREC_3169

Alternate gene names: 238925513

Gene position: 3020929-3019985 (Counterclockwise)

Preceding gene: 238925514

Following gene: 238925512

Centisome position: 87.57

GC content: 49.42

Gene sequence:

>945_bases
ATGAATCAGAGCAATAATCAGATAATAAAGAAAAATTTGTTAATCATATGCCGCGGTGCAGGAGACCTTGCGACCGGCAT
CATCCACAGACTGCACCGGGCAGGGCATAGGGTGATAGCGCTTGAGACAGACTATCCGGCTGCCATACGGCGCCAGGTGT
CCTTTTGTGAAGCAGTGTATGATGGGAGCGCAGCTGTAGAGGGTGTGACAGCCAGACTTGTTCCTGCCTTGGCTGATGCA
GAGACATATTCAGGGATAAGTGACACACCGGCAGCTCATATTGCATCAGAAAAGTGGGATAGTTCAGCCATCGAAGCTGT
GCTTGAAGCCGGAGAGGTCCCGCTTCTTATAGATCCAAAGGGTGAGTCAATTGAACTTTTGAAGCCGGATGCTGTGGTAG
ATGCCATAATAGCAAAGAAAAATCTGGGTACCACAATCAATATGGCCCCGCTTGTGATAGGAGTAGGCCCGGGCTTTACG
GCAGGGCAAGACGTGCATCTGGTGATTGAGTCCATGCGTGGGCACAATCTGGCGCGCATCATTACCGATGGCATGGCACA
GCCCAACACAGGTGTTCCGGGAAATATCGCCGGCTTCACAAGTGAGCGTGTGATTCACGCTCCGGCGGCAGGATATATTC
ATGACGTCAGAAAAATCGGAGACATCGTGCAAAAGGGCGATGAGATAGCGCGGATATATCCGGATAAAGAAAGCTATGAC
AATGCATTGTCTGAATATGTCCCTGTGAATGCTACAATTACAGGCATCATACGAGGCCTTATCCGTGAGGGTTATTATTT
CAGGAAAGGCTTCAAGATAGCGGATATCGACCCGCGCGAGAGTGAGATAACAAATTGCTTTACAATCTCTGACAAGGCAA
GGAGTATAGCAGGCAGTGTGCTTGAGGCGGCATCGGCATTTGAGCACGGCGTAAAGATTTATTAA

Upstream 100 bases:

>100_bases
GAAGGACGAATATCGTGCGTTTTTGCGAATGAGCGTTGGTGGTTCTGAATAGTTGCAAATATGGAAATAATAAGGTAACA
GGGTAATTAATCAGATGAGC

Downstream 100 bases:

>100_bases
ATAATAAATGAGGGTAACTATTAAGGTGTTTTCAGTGGTTCTGAATAGTTACAGTGAGGATAAATAGATTGACGCAGGAA
AACGAATTAGATATCAATAA

Product: biotin/lipoyl attachment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNQSNNQIIKKNLLIICRGAGDLATGIIHRLHRAGHRVIALETDYPAAIRRQVSFCEAVYDGSAAVEGVTARLVPALADA
ETYSGISDTPAAHIASEKWDSSAIEAVLEAGEVPLLIDPKGESIELLKPDAVVDAIIAKKNLGTTINMAPLVIGVGPGFT
AGQDVHLVIESMRGHNLARIITDGMAQPNTGVPGNIAGFTSERVIHAPAAGYIHDVRKIGDIVQKGDEIARIYPDKESYD
NALSEYVPVNATITGIIRGLIREGYYFRKGFKIADIDPRESEITNCFTISDKARSIAGSVLEAASAFEHGVKIY

Sequences:

>Translated_314_residues
MNQSNNQIIKKNLLIICRGAGDLATGIIHRLHRAGHRVIALETDYPAAIRRQVSFCEAVYDGSAAVEGVTARLVPALADA
ETYSGISDTPAAHIASEKWDSSAIEAVLEAGEVPLLIDPKGESIELLKPDAVVDAIIAKKNLGTTINMAPLVIGVGPGFT
AGQDVHLVIESMRGHNLARIITDGMAQPNTGVPGNIAGFTSERVIHAPAAGYIHDVRKIGDIVQKGDEIARIYPDKESYD
NALSEYVPVNATITGIIRGLIREGYYFRKGFKIADIDPRESEITNCFTISDKARSIAGSVLEAASAFEHGVKIY
>Mature_314_residues
MNQSNNQIIKKNLLIICRGAGDLATGIIHRLHRAGHRVIALETDYPAAIRRQVSFCEAVYDGSAAVEGVTARLVPALADA
ETYSGISDTPAAHIASEKWDSSAIEAVLEAGEVPLLIDPKGESIELLKPDAVVDAIIAKKNLGTTINMAPLVIGVGPGFT
AGQDVHLVIESMRGHNLARIITDGMAQPNTGVPGNIAGFTSERVIHAPAAGYIHDVRKIGDIVQKGDEIARIYPDKESYD
NALSEYVPVNATITGIIRGLIREGYYFRKGFKIADIDPRESEITNCFTISDKARSIAGSVLEAASAFEHGVKIY

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=300, Percent_Identity=45.6666666666667, Blast_Score=241, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 33623; Mature: 33623

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSNNQIIKKNLLIICRGAGDLATGIIHRLHRAGHRVIALETDYPAAIRRQVSFCEAVY
CCCCCCCEEECCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
DGSAAVEGVTARLVPALADAETYSGISDTPAAHIASEKWDSSAIEAVLEAGEVPLLIDPK
CCCHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEECCC
GESIELLKPDAVVDAIIAKKNLGTTINMAPLVIGVGPGFTAGQDVHLVIESMRGHNLARI
CCEEEEECCHHHHHHHHHHCCCCCEEEECEEEEECCCCCCCCCHHHHHHHHHCCCCHHHH
ITDGMAQPNTGVPGNIAGFTSERVIHAPAAGYIHDVRKIGDIVQKGDEIARIYPDKESYD
HHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
NALSEYVPVNATITGIIRGLIREGYYFRKGFKIADIDPRESEITNCFTISDKARSIAGSV
HHHHHHCCCCHHHHHHHHHHHHCCCEECCCCEEECCCCCHHHCCEEEEECHHHHHHHHHH
LEAASAFEHGVKIY
HHHHHHHHCCCCCC
>Mature Secondary Structure
MNQSNNQIIKKNLLIICRGAGDLATGIIHRLHRAGHRVIALETDYPAAIRRQVSFCEAVY
CCCCCCCEEECCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH
DGSAAVEGVTARLVPALADAETYSGISDTPAAHIASEKWDSSAIEAVLEAGEVPLLIDPK
CCCHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEECCC
GESIELLKPDAVVDAIIAKKNLGTTINMAPLVIGVGPGFTAGQDVHLVIESMRGHNLARI
CCEEEEECCHHHHHHHHHHCCCCCEEEECEEEEECCCCCCCCCHHHHHHHHHCCCCHHHH
ITDGMAQPNTGVPGNIAGFTSERVIHAPAAGYIHDVRKIGDIVQKGDEIARIYPDKESYD
HHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
NALSEYVPVNATITGIIRGLIREGYYFRKGFKIADIDPRESEITNCFTISDKARSIAGSV
HHHHHHCCCCHHHHHHHHHHHHCCCEECCCCEEECCCCCHHHCCEEEEECHHHHHHHHHH
LEAASAFEHGVKIY
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]