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The map label for this gene is yqeB [H]

Identifier: 238925508

GI number: 238925508

Start: 3015136

End: 3016551

Strand: Reverse

Name: yqeB [H]

Synonym: EUBREC_3164

Alternate gene names: 238925508

Gene position: 3016551-3015136 (Counterclockwise)

Preceding gene: 238925509

Following gene: 238925507

Centisome position: 87.44

GC content: 47.95

Gene sequence:

>1416_bases
ATGGGAAAGCTTCTTGCAATCAATATAAGCAAAGAGAGAGGAACTGAAAAGAGAGAGGTGCCACAGGCGGAGCTTGTTGC
AGACTATGGCATCATGGGAGATGCACATGCCGGAAAGTGGCACAGGCAGGTCAGCCTGCTTTCCGCAGAGAAAATAGATG
CCTTCAGGGCAAGAGGAGCGCAGATAGACAACGGCGCATTTGGCGAAAATTTAATTATATCAGGATTTGATTTCAAGAAT
TTACCGCTTGGAACACGCTTTTGCATAGGAGATGCTATTCTGGAGATGACGCAGATAGGCAAGCAGTGTCATTCGCATTG
TGCTATCTACAAGAGGATGGGCGAGTGCATTATGCCAAAGGAGGGCGTGTTTGCAGTAGTCATAAGAGGCGGCCAGATTC
ATACCGGTGACGAGGTGAAGCTGATTCCGGCAAACATATATGCTTCGATAAAGGACAGACCGGCGGACAGTCGCTGTGAG
CTTTTGACAGTCACAGAAGGAGCACATGCCGGTGAAAAGGCGCTTTATATAGATGGCAGAATAAGAGTGGCATCAGGCAG
TGCATGGGCAGATGAAATAAATGACAATGATAATTCCATTGTGATGTTTAAACAGCAGATAGGCAGCAGACCACGCCTCA
TAATCTGCGGAGGAGGTCATGTATCGGCGGCACTTGTACGCATGGCATCACTTTTGGCCTTTGACATATGGGTGATAGAG
GACAGACCTCTGTTTGCCGATAATGCAAAGCGCCAAGGAGCAGACCATGTAATTTGCGGCGATTATAAAAAAACTCTCGC
CAGGCTGGAGCCACAGGCGGATGATTACTATGTATGCATGACAAGAGGTCATCGCTTTGATATGGAGTGTCTTACAGAGA
TATTCAGAAAGCCATACGCCTATGTGGGGATGATGGGCTCAAAGAAAAGAGCTGCCATAGTAAAAAAAGACCTTGAAGAA
TCGGGATTTTCACGGGAAAACATATCCGGATTACATTCTCCGATAGGCCTTGCAATAGGCGGACAGACACCGGAGGAAAT
TGCGCTTTCGGTGATAAGTGAGATAGTAAAGTGCAAAAATGAGCGTACCGGCTGCACACAGGTGGATAACGAAGTGCTTG
ATGCACTTATTGAGGCATCAGATGAGAAGTATATACTGTGTACCATCATAAAAAAGAATGGCAGTGCACCGCGCGGAGTC
GGAACACAGATGCTCGTGAGCTCAGACAATCGGATCATCGGAACTATAGGCGGCGGTTGTGCGGAGGCAGAGGTTATAAG
CCAATGCAGGAGACTGTTTCGCAAGCAGGAGTTCAAATGCGGTTTGATGGATGTGAGCATGAACACTGACGATGCCGAGA
AAGAGGGCATGGTGTGCGGAGGCAGTATTTCGGTGCTGCTGGAGCAGCTTGGATGA

Upstream 100 bases:

>100_bases
TACAGAGACAAAGACTGTAGAGACAAAGGCTACAGAGCTGAAAGCTGCGGAAGTAAATGCAGCAAGAAATATGAGCCGGA
TAGGAGGCTGATAGCAAATC

Downstream 100 bases:

>100_bases
TGAAATTATCATATATTATTAAATCAAGACAAGCCGAATATGAATATTAATCACATGCATATTTAATTTAAATAAAGGAA
AAGAAAGGTTAAAAGTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MGKLLAINISKERGTEKREVPQAELVADYGIMGDAHAGKWHRQVSLLSAEKIDAFRARGAQIDNGAFGENLIISGFDFKN
LPLGTRFCIGDAILEMTQIGKQCHSHCAIYKRMGECIMPKEGVFAVVIRGGQIHTGDEVKLIPANIYASIKDRPADSRCE
LLTVTEGAHAGEKALYIDGRIRVASGSAWADEINDNDNSIVMFKQQIGSRPRLIICGGGHVSAALVRMASLLAFDIWVIE
DRPLFADNAKRQGADHVICGDYKKTLARLEPQADDYYVCMTRGHRFDMECLTEIFRKPYAYVGMMGSKKRAAIVKKDLEE
SGFSRENISGLHSPIGLAIGGQTPEEIALSVISEIVKCKNERTGCTQVDNEVLDALIEASDEKYILCTIIKKNGSAPRGV
GTQMLVSSDNRIIGTIGGGCAEAEVISQCRRLFRKQEFKCGLMDVSMNTDDAEKEGMVCGGSISVLLEQLG

Sequences:

>Translated_471_residues
MGKLLAINISKERGTEKREVPQAELVADYGIMGDAHAGKWHRQVSLLSAEKIDAFRARGAQIDNGAFGENLIISGFDFKN
LPLGTRFCIGDAILEMTQIGKQCHSHCAIYKRMGECIMPKEGVFAVVIRGGQIHTGDEVKLIPANIYASIKDRPADSRCE
LLTVTEGAHAGEKALYIDGRIRVASGSAWADEINDNDNSIVMFKQQIGSRPRLIICGGGHVSAALVRMASLLAFDIWVIE
DRPLFADNAKRQGADHVICGDYKKTLARLEPQADDYYVCMTRGHRFDMECLTEIFRKPYAYVGMMGSKKRAAIVKKDLEE
SGFSRENISGLHSPIGLAIGGQTPEEIALSVISEIVKCKNERTGCTQVDNEVLDALIEASDEKYILCTIIKKNGSAPRGV
GTQMLVSSDNRIIGTIGGGCAEAEVISQCRRLFRKQEFKCGLMDVSMNTDDAEKEGMVCGGSISVLLEQLG
>Mature_470_residues
GKLLAINISKERGTEKREVPQAELVADYGIMGDAHAGKWHRQVSLLSAEKIDAFRARGAQIDNGAFGENLIISGFDFKNL
PLGTRFCIGDAILEMTQIGKQCHSHCAIYKRMGECIMPKEGVFAVVIRGGQIHTGDEVKLIPANIYASIKDRPADSRCEL
LTVTEGAHAGEKALYIDGRIRVASGSAWADEINDNDNSIVMFKQQIGSRPRLIICGGGHVSAALVRMASLLAFDIWVIED
RPLFADNAKRQGADHVICGDYKKTLARLEPQADDYYVCMTRGHRFDMECLTEIFRKPYAYVGMMGSKKRAAIVKKDLEES
GFSRENISGLHSPIGLAIGGQTPEEIALSVISEIVKCKNERTGCTQVDNEVLDALIEASDEKYILCTIIKKNGSAPRGVG
TQMLVSSDNRIIGTIGGGCAEAEVISQCRRLFRKQEFKCGLMDVSMNTDDAEKEGMVCGGSISVLLEQLG

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=177, Percent_Identity=31.0734463276836, Blast_Score=102, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 51443; Mature: 51312

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLLAINISKERGTEKREVPQAELVADYGIMGDAHAGKWHRQVSLLSAEKIDAFRARGA
CCCEEEEEECHHCCCHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
QIDNGAFGENLIISGFDFKNLPLGTRFCIGDAILEMTQIGKQCHSHCAIYKRMGECIMPK
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGVFAVVIRGGQIHTGDEVKLIPANIYASIKDRPADSRCELLTVTEGAHAGEKALYIDGR
CCEEEEEEECCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCE
IRVASGSAWADEINDNDNSIVMFKQQIGSRPRLIICGGGHVSAALVRMASLLAFDIWVIE
EEEECCCCCHHCCCCCCCEEEEEHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEEEEEEE
DRPLFADNAKRQGADHVICGDYKKTLARLEPQADDYYVCMTRGHRFDMECLTEIFRKPYA
CCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCE
YVGMMGSKKRAAIVKKDLEESGFSRENISGLHSPIGLAIGGQTPEEIALSVISEIVKCKN
EEECCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC
ERTGCTQVDNEVLDALIEASDEKYILCTIIKKNGSAPRGVGTQMLVSSDNRIIGTIGGGC
CCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCC
AEAEVISQCRRLFRKQEFKCGLMDVSMNTDDAEKEGMVCGGSISVLLEQLG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCHHHHHHHHCC
>Mature Secondary Structure 
GKLLAINISKERGTEKREVPQAELVADYGIMGDAHAGKWHRQVSLLSAEKIDAFRARGA
CCEEEEEECHHCCCHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
QIDNGAFGENLIISGFDFKNLPLGTRFCIGDAILEMTQIGKQCHSHCAIYKRMGECIMPK
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGVFAVVIRGGQIHTGDEVKLIPANIYASIKDRPADSRCELLTVTEGAHAGEKALYIDGR
CCEEEEEEECCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCE
IRVASGSAWADEINDNDNSIVMFKQQIGSRPRLIICGGGHVSAALVRMASLLAFDIWVIE
EEEECCCCCHHCCCCCCCEEEEEHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEEEEEEE
DRPLFADNAKRQGADHVICGDYKKTLARLEPQADDYYVCMTRGHRFDMECLTEIFRKPYA
CCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCE
YVGMMGSKKRAAIVKKDLEESGFSRENISGLHSPIGLAIGGQTPEEIALSVISEIVKCKN
EEECCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC
ERTGCTQVDNEVLDALIEASDEKYILCTIIKKNGSAPRGVGTQMLVSSDNRIIGTIGGGC
CCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCC
AEAEVISQCRRLFRKQEFKCGLMDVSMNTDDAEKEGMVCGGSISVLLEQLG
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]