Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238925413
Identifier: 238925413
GI number: 238925413
Start: 2932308
End: 2932784
Strand: Reverse
Name: 238925413
Synonym: EUBREC_3068
Alternate gene names: NA
Gene position: 2932784-2932308 (Counterclockwise)
Preceding gene: 238925414
Following gene: 238925412
Centisome position: 85.02
GC content: 38.16
Gene sequence:
>477_bases ATGAATAGCATAAATATTTATGAAAACAAAACACTGAAACTCCAAAACGTCATAGTCCGTAGGCTTGATCTTGAATCAGA TGATCAAAATCTTTTTGATTCTGAAATTAACAAAATAAGTACATACATACAGACGCATGGAGCAAACCAGATCGGACCGT TAATTCAATATTCAAAGGTTGAGCTGGATGAAAATAATGAGCCTGATATCAACATGCAGTTTATGCTCCAGGCGAACAAC TTTATCCACAACGTAGAGCAGCCATATAGGATGGAGTCTCTGCTGCGTGTAAAAAACTGTCTGTATGCCAGATATAACGG ACCGGATGATAAGCTGAAGTTCGCTTATGATAAGCTTGGGGTGTATGCATTTGAGAATGATATTGAGTTGGATGGCTGCA ATTATACGATCTACGTGGACAGAAACGAAGAAGAAGAGACAATGGTTGCAGATGTATTCATGCCTGTAAAGGAATAA
Upstream 100 bases:
>100_bases TAGGTAGTGATTTTGTATGTAACAGCTTTTACATAGAGTCAGAAGTGGTTGCAAACACTTCTGACAACAATACTATAAAA AATCAGAAAGGAAGTGAATT
Downstream 100 bases:
>100_bases AAGTGTTATGAGCAGAAGAGGATGTAATCATGATTTACATAAAGTTATGTCTGATTGCAAACAGACATGGCAGAAAAATA TTGTTTAGAAGAAAGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNSINIYENKTLKLQNVIVRRLDLESDDQNLFDSEINKISTYIQTHGANQIGPLIQYSKVELDENNEPDINMQFMLQANN FIHNVEQPYRMESLLRVKNCLYARYNGPDDKLKFAYDKLGVYAFENDIELDGCNYTIYVDRNEEEETMVADVFMPVKE
Sequences:
>Translated_158_residues MNSINIYENKTLKLQNVIVRRLDLESDDQNLFDSEINKISTYIQTHGANQIGPLIQYSKVELDENNEPDINMQFMLQANN FIHNVEQPYRMESLLRVKNCLYARYNGPDDKLKFAYDKLGVYAFENDIELDGCNYTIYVDRNEEEETMVADVFMPVKE >Mature_158_residues MNSINIYENKTLKLQNVIVRRLDLESDDQNLFDSEINKISTYIQTHGANQIGPLIQYSKVELDENNEPDINMQFMLQANN FIHNVEQPYRMESLLRVKNCLYARYNGPDDKLKFAYDKLGVYAFENDIELDGCNYTIYVDRNEEEETMVADVFMPVKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18562; Mature: 18562
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSINIYENKTLKLQNVIVRRLDLESDDQNLFDSEINKISTYIQTHGANQIGPLIQYSKV CCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE ELDENNEPDINMQFMLQANNFIHNVEQPYRMESLLRVKNCLYARYNGPDDKLKFAYDKLG EECCCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHEEEHHHCE VYAFENDIELDGCNYTIYVDRNEEEETMVADVFMPVKE EEEECCCEEECCCCEEEEEECCCCCHHEEEEEEEECCC >Mature Secondary Structure MNSINIYENKTLKLQNVIVRRLDLESDDQNLFDSEINKISTYIQTHGANQIGPLIQYSKV CCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE ELDENNEPDINMQFMLQANNFIHNVEQPYRMESLLRVKNCLYARYNGPDDKLKFAYDKLG EECCCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHEEEHHHCE VYAFENDIELDGCNYTIYVDRNEEEETMVADVFMPVKE EEEECCCEEECCCCEEEEEECCCCCHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA