Definition | Eubacterium rectale ATCC 33656, complete genome. |
---|---|
Accession | NC_012781 |
Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238925406
Identifier: 238925406
GI number: 238925406
Start: 2925675
End: 2926007
Strand: Reverse
Name: 238925406
Synonym: EUBREC_3061
Alternate gene names: NA
Gene position: 2926007-2925675 (Counterclockwise)
Preceding gene: 238925407
Following gene: 238925405
Centisome position: 84.82
GC content: 39.64
Gene sequence:
>333_bases ATGGATATGTGTTATGATGGAGCACTGGTGCTCCCAAGCAGTTATGCTGTAATGGATGAAGAGGAAATGTGCTATACGGA AGGAGGGTGGAGTGGACGTCAAGTGCTTAAGAATGTATGTGGAATTCTTGCAGTATTTTCATTAGGTTATGCAGGGGCTG CATTTAGACATTTTGTTGAAAAAAATAAGGGATTATCATATGGAAGAATGTTGAGTAAAGCAGGTGGAACTTTATTGAGA TTTATCAAAGCGGTTCCATGGCAGGTAAAGGTGGCTATAGGAGTATGCACAGCAGCAACTCTGTATGCATTAGGATCATA CGATTTATTTTAA
Upstream 100 bases:
>100_bases TTATAATTTTGTATGTAATGATCATTTACATAAAGTCGTGCCTGGTTGCAAACAGGAATGACAGAAACATTAAAACAAAT AGAAAAGGAGGTACACATAT
Downstream 100 bases:
>100_bases AATATTGTATGTTTATAAGGCAATAAATATTTAAGGATAGACAGAAAATGAAAAGTAGTCTCAATAAATTATTTTATATG AGACTACTTTTGTACAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MDMCYDGALVLPSSYAVMDEEEMCYTEGGWSGRQVLKNVCGILAVFSLGYAGAAFRHFVEKNKGLSYGRMLSKAGGTLLR FIKAVPWQVKVAIGVCTAATLYALGSYDLF
Sequences:
>Translated_110_residues MDMCYDGALVLPSSYAVMDEEEMCYTEGGWSGRQVLKNVCGILAVFSLGYAGAAFRHFVEKNKGLSYGRMLSKAGGTLLR FIKAVPWQVKVAIGVCTAATLYALGSYDLF >Mature_110_residues MDMCYDGALVLPSSYAVMDEEEMCYTEGGWSGRQVLKNVCGILAVFSLGYAGAAFRHFVEKNKGLSYGRMLSKAGGTLLR FIKAVPWQVKVAIGVCTAATLYALGSYDLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11950; Mature: 11950
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMCYDGALVLPSSYAVMDEEEMCYTEGGWSGRQVLKNVCGILAVFSLGYAGAAFRHFVE CCCCCCCEEECCCCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNKGLSYGRMLSKAGGTLLRFIKAVPWQVKVAIGVCTAATLYALGSYDLF HCCCCCHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDMCYDGALVLPSSYAVMDEEEMCYTEGGWSGRQVLKNVCGILAVFSLGYAGAAFRHFVE CCCCCCCEEECCCCCEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNKGLSYGRMLSKAGGTLLRFIKAVPWQVKVAIGVCTAATLYALGSYDLF HCCCCCHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA