| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925362
Identifier: 238925362
GI number: 238925362
Start: 2896666
End: 2897235
Strand: Reverse
Name: 238925362
Synonym: EUBREC_3017
Alternate gene names: NA
Gene position: 2897235-2896666 (Counterclockwise)
Preceding gene: 238925363
Following gene: 238925360
Centisome position: 83.99
GC content: 44.21
Gene sequence:
>570_bases ATGACACAGCAAGGTAAGAATGCAATAGATCTGGTGCTCGCTGAGAGCCTTATAGAGCTTTCGGCGAAAAAGCCAATCGA TAAGATTACAATTAAAGAGATAACGGACAAGGCCGGAGTTATCCGCCCTACGTTTTACAATCATTTTCAGGACAAGTACG AGCTGATAGAGTGGATTATCAAAAGCGAGCTGCTTGAGCCCATCAAGCCACTGCTCAATGCCGGAATGATTTTTGAAGCG ATTGTGCTGATGCTCAATAATATCTCGGCAAACAGTGTTTTTTACAAGAAAGCACTAAAGCTGGAGGGTGCAGTGACGTT TAATCAGATTGCCATGAAGTGCGTCTACGAGATGTTTATGAATATCATAAACGAAAAGAGTACAGGAAAGAAATCCAAAT ACCGCTGGCTCACACCGGAGGTGATTTCTACATATTATGCGCAGTCGTTGTGCTTTATCACGGAGGGCTGGATAGCCCAG GGCATGGATGATATTGAGCCGAAGGAGATGGCTGAGGCGTACATGTATCTGATTACGCGCTCAATGGATGATATACTAAG TGAGCTGTAG
Upstream 100 bases:
>100_bases ACTACGTGGTCAGCGAGAGGCTCAAAAGCCGTGAGGGCGATGTCGTGGATGTGAGGGAGACTGAGAAGGGCTACTTTGTC ACGATGGAGTTTGATGAGTA
Downstream 100 bases:
>100_bases AGGACAATTGCCATGGAAAATGACGGCTTAAGCAAGCTCATAAAGCAGAATCATAAAGAGGCATGTGTTCATATAAATAT GAAAATGCTGTGAAAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTQQGKNAIDLVLAESLIELSAKKPIDKITIKEITDKAGVIRPTFYNHFQDKYELIEWIIKSELLEPIKPLLNAGMIFEA IVLMLNNISANSVFYKKALKLEGAVTFNQIAMKCVYEMFMNIINEKSTGKKSKYRWLTPEVISTYYAQSLCFITEGWIAQ GMDDIEPKEMAEAYMYLITRSMDDILSEL
Sequences:
>Translated_189_residues MTQQGKNAIDLVLAESLIELSAKKPIDKITIKEITDKAGVIRPTFYNHFQDKYELIEWIIKSELLEPIKPLLNAGMIFEA IVLMLNNISANSVFYKKALKLEGAVTFNQIAMKCVYEMFMNIINEKSTGKKSKYRWLTPEVISTYYAQSLCFITEGWIAQ GMDDIEPKEMAEAYMYLITRSMDDILSEL >Mature_188_residues TQQGKNAIDLVLAESLIELSAKKPIDKITIKEITDKAGVIRPTFYNHFQDKYELIEWIIKSELLEPIKPLLNAGMIFEAI VLMLNNISANSVFYKKALKLEGAVTFNQIAMKCVYEMFMNIINEKSTGKKSKYRWLTPEVISTYYAQSLCFITEGWIAQG MDDIEPKEMAEAYMYLITRSMDDILSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21698; Mature: 21567
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQGKNAIDLVLAESLIELSAKKPIDKITIKEITDKAGVIRPTFYNHFQDKYELIEWII CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KSELLEPIKPLLNAGMIFEAIVLMLNNISANSVFYKKALKLEGAVTFNQIAMKCVYEMFM HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NIINEKSTGKKSKYRWLTPEVISTYYAQSLCFITEGWIAQGMDDIEPKEMAEAYMYLITR HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SMDDILSEL HHHHHHHCC >Mature Secondary Structure TQQGKNAIDLVLAESLIELSAKKPIDKITIKEITDKAGVIRPTFYNHFQDKYELIEWII CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KSELLEPIKPLLNAGMIFEAIVLMLNNISANSVFYKKALKLEGAVTFNQIAMKCVYEMFM HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NIINEKSTGKKSKYRWLTPEVISTYYAQSLCFITEGWIAQGMDDIEPKEMAEAYMYLITR HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH SMDDILSEL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA