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The map label for this gene is ydfJ [H]

Identifier: 238925360

GI number: 238925360

Start: 2894325

End: 2896514

Strand: Reverse

Name: ydfJ [H]

Synonym: EUBREC_3015

Alternate gene names: 238925360

Gene position: 2896514-2894325 (Counterclockwise)

Preceding gene: 238925362

Following gene: 238925359

Centisome position: 83.96

GC content: 41.96

Gene sequence:

>2190_bases
ATGGATTTGTATATCTCACATGACAAATCGAAGAGATTGAATATTTATTTATTCGGTCTTTTTTTTTATACTTCAATACG
AATAAAAGAAAGAGTGGTGAATCTAATGATTAAATTTGGAAAAGGAGTCGTAAAACATCGTGTGCTGATACTGATAGTTG
CATTTGCACTGCTTATACCGTCGGGCATCAGCTTTATCAACACGAGAATCAACTTTGATATCCTTTCTTATCTGCCAAGC
CAGATAGAGACTATGAAGGGTCAGGATATCATGGTAGATGAGTTTGGAACCGGAGCGTTGTCATTTGTGATCTTAGAGGA
TATGAAGGATCAGGACATAGAGACTCTGGCAGATGACATAGAGGACCTTAAGGGTGTAAATGATGTCATCTGGTACGGAA
CAATCGCTGATTCCACATTGCCAAGAGAGGCAATTCCGGATGAGGTGTATGATGCATTCAACAACAAGGATGCAAACAGC
CAGCTCATGCTCGTCACCTACAGTGACACAATGGGTTCGGATGAGACAATGGAAGCCGTCAACAAGATGGATAAGATGGT
GAAAAACCACTGCTTCGTAGCAGGAATGGCAGCGGTCAACGCAGATACAAAGACACTTGTTATGCAGCAGGCTCCTATAT
ATGTCATCATAGCAGCATTGCTTTCAATGCTTGTCATGGGAATTACAATGGATTCAATAATTGTTCCGATGTTATTCCTC
CTAAGCATAGGAATGGCTATTATCTATAACCTGGGAACAAACTTTATACAGGGACAGATTTCATACCTGACACTGGCACT
GACAGCAGTATTGCAGCTCGCCGTAACAATGGATTATTCGATTTTCCTGTGGCACAGCTATCAGGAGCAGATAGACAGAT
ATGACGGAGACAAGAAGCGAGCCATGGCACATGCCATTTCCCACACAATTGTCTCAGTAACAGGAAGCTCAATCACAACA
ATCGCAGGCTTCGTAGCTCTCTGCTTCATGAGCTTTACACTTGGACTTGACCTGGGAATCGTAATGGCAAAGGGTGTTGT
ATTCGGAGTTATCGGATGTGTAACAATTCTCCCTGCACTGATTCTTGCATGTGATAAGGTAATCGAGAAGACAAAGCACA
AGATTCTCATGCCTGATGTTTCCAGGATTGCAAGCTGGGTAACAAATCATTATAAGATACTTGCAGTGATTTTCATCGTA
GTGCTCATCCCGGCAATATACGGATACACTCATGATCAGGTCTACTATGACCTTGCAGGAACCATGCCTGACAGTGCATA
CAGTAAGCAGGCCAATGAAAGACTCGACAAGGAGTATGCTATGGGTGCCACACATATCATCATCGCGCCGAGCGATATGT
CAAAGGCAGACAGCATAAGCATGATAGATGATATAAAGAAGGTCGATGGAGTAAAGCTTGCGGTATCGCTTGACTCAATA
CTCGGACCTACCATACCGGATGATATGGTGCCGGATGAGGCAAAGGAGATATTCAAAAACGGTGATTACCAGATGATGCT
TGTTTCATCAAAATATGAGACAGCATCTGATGAGGTAAACAACCAGATTACAGAGATTAAAAAGATAGTAAAGAATTACA
GCAAGGACGCAATGCTTATCGGTGAGGCACCTTGTACCAAGGATCTTATCACTATCACAGATACAGACTTTAAGCGTGTA
AGTGCAGTATCAATCGTATTGATATTCCTTATCATCCTGATTGTATTCAAATCGGTATCGCTTCCAATCATACTTGTAGC
GGTCATCGAGTTTGCAATCTTTGTAAACATGGGAATTCCGGGATTTACAGGAACAAAGCTTCCGTTTATCGCGAGCATCG
TAATCGGAACCATACAGCTTGGTGCAACGGTTGACTATGCGATACTTATGACCACAAAGTACAGAAAGAACAGATACACC
GGAATGGACAAAAAGCCGGCAATCACAAAGGCACTTGCAGATTCGACAAACTCAGTTATAGTCAGTGCACTCTGTTTCTT
CGCCGCAACCTTTGGTGTAGGACTTTATTCAAACATTGATATGATCAGTTCTATCTGTATACTGCTTGCACGAGGCGCAA
TCATCAGTATGTTTGTAGTAGTATTTATACTTCCGTCAATGTTTATGATTTTTGACAAAGTAATATGTGCCACAAGCGCA
GGCTTTAAAAATAAGAACCTGACAGCTTAG

Upstream 100 bases:

>100_bases
CATAAAGAGGCATGTGTTCATATAAATATGAAAATGCTGTGAAAAAGTGTCAGAAATCAAATACAATATCATATATGTGT
CATATCGGATATACAAATTG

Downstream 100 bases:

>100_bases
TAATCTGATTAATCATAAATGAGGGATAAAATACTTTTTGACCCTCATAACATAAAAATATGACCTCAAAAATAAAATCA
GGAGGAATAAGACATGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 729; Mature: 729

Protein sequence:

>729_residues
MDLYISHDKSKRLNIYLFGLFFYTSIRIKERVVNLMIKFGKGVVKHRVLILIVAFALLIPSGISFINTRINFDILSYLPS
QIETMKGQDIMVDEFGTGALSFVILEDMKDQDIETLADDIEDLKGVNDVIWYGTIADSTLPREAIPDEVYDAFNNKDANS
QLMLVTYSDTMGSDETMEAVNKMDKMVKNHCFVAGMAAVNADTKTLVMQQAPIYVIIAALLSMLVMGITMDSIIVPMLFL
LSIGMAIIYNLGTNFIQGQISYLTLALTAVLQLAVTMDYSIFLWHSYQEQIDRYDGDKKRAMAHAISHTIVSVTGSSITT
IAGFVALCFMSFTLGLDLGIVMAKGVVFGVIGCVTILPALILACDKVIEKTKHKILMPDVSRIASWVTNHYKILAVIFIV
VLIPAIYGYTHDQVYYDLAGTMPDSAYSKQANERLDKEYAMGATHIIIAPSDMSKADSISMIDDIKKVDGVKLAVSLDSI
LGPTIPDDMVPDEAKEIFKNGDYQMMLVSSKYETASDEVNNQITEIKKIVKNYSKDAMLIGEAPCTKDLITITDTDFKRV
SAVSIVLIFLIILIVFKSVSLPIILVAVIEFAIFVNMGIPGFTGTKLPFIASIVIGTIQLGATVDYAILMTTKYRKNRYT
GMDKKPAITKALADSTNSVIVSALCFFAATFGVGLYSNIDMISSICILLARGAIISMFVVVFILPSMFMIFDKVICATSA
GFKNKNLTA

Sequences:

>Translated_729_residues
MDLYISHDKSKRLNIYLFGLFFYTSIRIKERVVNLMIKFGKGVVKHRVLILIVAFALLIPSGISFINTRINFDILSYLPS
QIETMKGQDIMVDEFGTGALSFVILEDMKDQDIETLADDIEDLKGVNDVIWYGTIADSTLPREAIPDEVYDAFNNKDANS
QLMLVTYSDTMGSDETMEAVNKMDKMVKNHCFVAGMAAVNADTKTLVMQQAPIYVIIAALLSMLVMGITMDSIIVPMLFL
LSIGMAIIYNLGTNFIQGQISYLTLALTAVLQLAVTMDYSIFLWHSYQEQIDRYDGDKKRAMAHAISHTIVSVTGSSITT
IAGFVALCFMSFTLGLDLGIVMAKGVVFGVIGCVTILPALILACDKVIEKTKHKILMPDVSRIASWVTNHYKILAVIFIV
VLIPAIYGYTHDQVYYDLAGTMPDSAYSKQANERLDKEYAMGATHIIIAPSDMSKADSISMIDDIKKVDGVKLAVSLDSI
LGPTIPDDMVPDEAKEIFKNGDYQMMLVSSKYETASDEVNNQITEIKKIVKNYSKDAMLIGEAPCTKDLITITDTDFKRV
SAVSIVLIFLIILIVFKSVSLPIILVAVIEFAIFVNMGIPGFTGTKLPFIASIVIGTIQLGATVDYAILMTTKYRKNRYT
GMDKKPAITKALADSTNSVIVSALCFFAATFGVGLYSNIDMISSICILLARGAIISMFVVVFILPSMFMIFDKVICATSA
GFKNKNLTA
>Mature_729_residues
MDLYISHDKSKRLNIYLFGLFFYTSIRIKERVVNLMIKFGKGVVKHRVLILIVAFALLIPSGISFINTRINFDILSYLPS
QIETMKGQDIMVDEFGTGALSFVILEDMKDQDIETLADDIEDLKGVNDVIWYGTIADSTLPREAIPDEVYDAFNNKDANS
QLMLVTYSDTMGSDETMEAVNKMDKMVKNHCFVAGMAAVNADTKTLVMQQAPIYVIIAALLSMLVMGITMDSIIVPMLFL
LSIGMAIIYNLGTNFIQGQISYLTLALTAVLQLAVTMDYSIFLWHSYQEQIDRYDGDKKRAMAHAISHTIVSVTGSSITT
IAGFVALCFMSFTLGLDLGIVMAKGVVFGVIGCVTILPALILACDKVIEKTKHKILMPDVSRIASWVTNHYKILAVIFIV
VLIPAIYGYTHDQVYYDLAGTMPDSAYSKQANERLDKEYAMGATHIIIAPSDMSKADSISMIDDIKKVDGVKLAVSLDSI
LGPTIPDDMVPDEAKEIFKNGDYQMMLVSSKYETASDEVNNQITEIKKIVKNYSKDAMLIGEAPCTKDLITITDTDFKRV
SAVSIVLIFLIILIVFKSVSLPIILVAVIEFAIFVNMGIPGFTGTKLPFIASIVIGTIQLGATVDYAILMTTKYRKNRYT
GMDKKPAITKALADSTNSVIVSALCFFAATFGVGLYSNIDMISSICILLARGAIISMFVVVFILPSMFMIFDKVICATSA
GFKNKNLTA

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 80264; Mature: 80264

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLYISHDKSKRLNIYLFGLFFYTSIRIKERVVNLMIKFGKGVVKHRVLILIVAFALLIP
CCEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
SGISFINTRINFDILSYLPSQIETMKGQDIMVDEFGTGALSFVILEDMKDQDIETLADDI
CCCHHHHHHCCHHHHHHCHHHHHHCCCCEEEEECCCCCCEEHHEECCCCCCHHHHHHHHH
EDLKGVNDVIWYGTIADSTLPREAIPDEVYDAFNNKDANSQLMLVTYSDTMGSDETMEAV
HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH
NKMDKMVKNHCFVAGMAAVNADTKTLVMQQAPIYVIIAALLSMLVMGITMDSIIVPMLFL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIGMAIIYNLGTNFIQGQISYLTLALTAVLQLAVTMDYSIFLWHSYQEQIDRYDGDKKR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCHHHH
AMAHAISHTIVSVTGSSITTIAGFVALCFMSFTLGLDLGIVMAKGVVFGVIGCVTILPAL
HHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILACDKVIEKTKHKILMPDVSRIASWVTNHYKILAVIFIVVLIPAIYGYTHDQVYYDLAG
HHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
TMPDSAYSKQANERLDKEYAMGATHIIIAPSDMSKADSISMIDDIKKVDGVKLAVSLDSI
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEHHHH
LGPTIPDDMVPDEAKEIFKNGDYQMMLVSSKYETASDEVNNQITEIKKIVKNYSKDAMLI
CCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
GEAPCTKDLITITDTDFKRVSAVSIVLIFLIILIVFKSVSLPIILVAVIEFAIFVNMGIP
ECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
GFTGTKLPFIASIVIGTIQLGATVDYAILMTTKYRKNRYTGMDKKPAITKALADSTNSVI
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHCCCHHHH
VSALCFFAATFGVGLYSNIDMISSICILLARGAIISMFVVVFILPSMFMIFDKVICATSA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFKNKNLTA
CCCCCCCCC
>Mature Secondary Structure
MDLYISHDKSKRLNIYLFGLFFYTSIRIKERVVNLMIKFGKGVVKHRVLILIVAFALLIP
CCEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
SGISFINTRINFDILSYLPSQIETMKGQDIMVDEFGTGALSFVILEDMKDQDIETLADDI
CCCHHHHHHCCHHHHHHCHHHHHHCCCCEEEEECCCCCCEEHHEECCCCCCHHHHHHHHH
EDLKGVNDVIWYGTIADSTLPREAIPDEVYDAFNNKDANSQLMLVTYSDTMGSDETMEAV
HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH
NKMDKMVKNHCFVAGMAAVNADTKTLVMQQAPIYVIIAALLSMLVMGITMDSIIVPMLFL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIGMAIIYNLGTNFIQGQISYLTLALTAVLQLAVTMDYSIFLWHSYQEQIDRYDGDKKR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHCCCHHHH
AMAHAISHTIVSVTGSSITTIAGFVALCFMSFTLGLDLGIVMAKGVVFGVIGCVTILPAL
HHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILACDKVIEKTKHKILMPDVSRIASWVTNHYKILAVIFIVVLIPAIYGYTHDQVYYDLAG
HHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
TMPDSAYSKQANERLDKEYAMGATHIIIAPSDMSKADSISMIDDIKKVDGVKLAVSLDSI
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEHHHH
LGPTIPDDMVPDEAKEIFKNGDYQMMLVSSKYETASDEVNNQITEIKKIVKNYSKDAMLI
CCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
GEAPCTKDLITITDTDFKRVSAVSIVLIFLIILIVFKSVSLPIILVAVIEFAIFVNMGIP
ECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
GFTGTKLPFIASIVIGTIQLGATVDYAILMTTKYRKNRYTGMDKKPAITKALADSTNSVI
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHCCCHHHH
VSALCFFAATFGVGLYSNIDMISSICILLARGAIISMFVVVFILPSMFMIFDKVICATSA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFKNKNLTA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]